Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/genes12030413

https://doi.org/10.3390/genes12030413

Spt4 Promotes Pol I Processivity and Transcription Elongation

Cited by: 5
Author(s): Abigail K. Huffines, Yvonne J. K. Edwards, David A. Schneider
Published: over 3 years ago

Software Mentions 18

bioconductor: DiffLogo
DiffLogo: A comparative visualisation of biooligomer motifs
Papers that mentioned: 7
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: ggseqlogo
A 'ggplot2' Extension for Drawing Publication-Ready Sequence Logos
Papers that mentioned: 49
cran: hexbin
Hexagonal Binning Routines
Papers that mentioned: 20
cran: matrixStats
Functions that Apply to Rows and Columns of Matrices (and to Vectors)
Papers that mentioned: 46
cran: plyr
Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468
cran: scales
Scale Functions for Visualization
Papers that mentioned: 104
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: statmod
Statistical Modeling
Papers that mentioned: 55
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
cran: tweedie
Evaluation of Tweedie Exponential Family Models
Papers that mentioned: 5
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: plyr
UNKNOWN
Papers that mentioned: 468
pypi: scales
Stats for Python processes
Papers that mentioned: 104
pypi: tweedie
Tweedie distribution estimations of pdf and cdf
Papers that mentioned: 5