Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: DiffLogo

https://packages.ecosyste.ms/registries/bioconductor.org/packages/DiffLogo

DiffLogo: A comparative visualisation of biooligomer motifs
1 version
Latest release: about 1 year ago
11,396 downloads total

Papers Mentioning DiffLogo 7

10.3390/genes12030413

Spt4 Promotes Pol I Processivity and Transcription Elongation
Cited by: 5
Author(s): Abigail K. Huffines, Yvonne J. K. Edwards, David A. Schneider
Software Mentions: 18
Published: almost 4 years ago

Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7
Cited by: 71
Author(s): Katja Meyer, Tino Köster, Christiané Nolte, Claus Weinholdt, Martin Lewinski, Ivo Große, Dorothee Staiger
Software Mentions: 5
Published: about 7 years ago

10.1186/s12859-015-0767-x

DiffLogo: a comparative visualization of sequence motifs
Cited by: 56
Author(s): Martin Nettling, Hendrik Treutler, Jan Grau, Jens Keilwagen, Stefan Posch, Ivo Große
Software Mentions: 3
Published: about 9 years ago

10.1186/s13059-019-1726-z

Codon usage optimization in pluripotent embryonic stem cells
Cited by: 37
Author(s): Susanne Bornelöv, Tommaso Selmi, Sophia Flad, Sabine Dietmann, Michaela Frye
Software Mentions: 3
Published: over 5 years ago

10.1186/s12864-016-2682-6

Detecting and correcting the binding-affinity bias in ChIP-seq data using inter-species information
Cited by: 5
Author(s): Martin Nettling, Hendrik Treutler, Jesús Cerquides, Ivo Große
Software Mentions: 2
Published: over 8 years ago

10.7554/eLife.61880

NusG is an intrinsic transcription termination factor that stimulates motility and coordinates gene expression with NusA
Cited by: 23
Author(s): Zachary F. Mandell, Reid T. Oshiro, Alexander V. Yakhnin, Rishi K. Vishwakarma, Mikhail Kashlev, Daniel B. Kearns, Paul Babitzke
Software Mentions: 2
Published: over 3 years ago

10.1007/s11103-020-01108-6

DNA-binding properties of the MADS-domain transcription factor SEPALLATA3 and mutant variants characterized by SELEX-seq
Cited by: 8
Author(s): Sandra Käppel, Ralf Eggeling, Florian Rümpler, Marco Groth, Rainer Melzer, Günter Theißen
Software Mentions: 1
Published: almost 4 years ago