Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-017-1332-x

https://doi.org/10.1186/s13059-017-1332-x

Adaptation of iCLIP to plants determines the binding landscape of the clock-regulated RNA-binding protein AtGRP7

Cited by: 71
Author(s): Katja Meyer, Tino Köster, Christiané Nolte, Claus Weinholdt, Martin Lewinski, Ivo Große, Dorothee Staiger
Published: about 7 years ago

Software Mentions 5

bioconductor: DiffLogo
DiffLogo: A comparative visualisation of biooligomer motifs
Papers that mentioned: 7
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: SUPPA
A tool to study splicing across multiple conditions at high speed and accuracy.
Papers that mentioned: 67