Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: curl
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/curl
A Modern and Flexible Web Client for R
42 versions
Latest release: 11 months ago
543 dependent packages
1,010,109 downloads last month
Papers Mentioning curl 21
10.1371/journal.pone.0251194
A computational reproducibility study of PLOS ONE articles featuring longitudinal data analysesCited by: 15
Author(s): Heidi Seibold, Severin Czerny, Siona Decke, Roman Dieterle, Thomas Eder, Steffen Fohr, Nico Hahn, Rabea Hartmann, Christoph Heindl, Philipp Kopper, Dario Lepke, Verena Loidl, Maximilian Mandl, Sarah Musiol, Jessica Peter, Alexander Piehler, Elio Rojas, Stefanie Schmid, Hannah Schmidt, Melissa Schmoll, Lennart Schneider, Xiao-Yin To, Viêt Anh Tran, Antje Völker, Moritz Wagner, Joshua Wagner, Maria Waize, Hannah Wecker, Rui Yang, Simone Zellner, Malte Nalenz
Software Mentions: 46
Published: about 3 years ago
10.12688/f1000research.24956.2
gprofiler2 -- an R package for gene list functional enrichment analysis and namespace conversion toolset g:ProfilerCited by: 274
Author(s): Liis Kolberg, Uku Raudvere, Ivan Kuzmin, Jaak Vilo, Hedi Peterson
Software Mentions: 14
Published: almost 4 years ago
10.1002/elsc.202000053
Implementing a digital infrastructure for the lab using a central laboratory server and the SiLA2 communication standardCited by: 3
Author(s): Marc Porr, F. Lange, Daniel Marquard, Laura Niemeyer, Patrick Lindner, Thomas Scheper, Sascha Beutel
Software Mentions: 8
Published: over 3 years ago
10.3390/genes11040428
LSTrAP-Cloud: A User-Friendly Cloud Computing Pipeline to Infer Coexpression NetworksCited by: 9
Author(s): Qiao Wen Tan, Wooi-Boon Goh, Marek Mutwil
Software Mentions: 6
Published: over 4 years ago
10.1186/1471-2105-12-S15-S5
Data hosting infrastructure for primary biodiversity dataCited by: 13
Author(s): Anthony Goddard, Nevin Wilson, Phil Cryer, Grant Yamashita
Software Mentions: 5
Published: almost 13 years ago
10.1371/journal.pcbi.1004668
A Quick Introduction to Version Control with Git and GitHubCited by: 97
Author(s): John Blischak, Emily Davenport, Gregory V. Wilson
Software Mentions: 5
Published: over 8 years ago
10.1093/gigascience/giy016
Boutiques: a flexible framework to integrate command-line applications in computing platformsCited by: 33
Author(s): Tristan Glatard, Gregory Kiar, Tristan Aumentado-Armstrong, Natacha Beck, Pierre Bellec, R. Bernard, Axel Bonnet, Shawn T. Brown, Sorina Camarasu-Pop, Frédéric Cervenansky, Samir Das, Rafael Ferreira da Silva, Guillaume Flandin, Pascal Girard, Krzysztof J. Gorgolewski, Charles R.G. Guttmann, Valérie Hayot‐Sasson, Pierre-Olivier Quirion, Pierre Rioux, Marc-Étienne Rousseau, Alan C. Evans
Software Mentions: 5
Published: over 6 years ago
10.1186/s13321-018-0312-9
MER: a shell script and annotation server for minimal named entity recognition and linkingCited by: 27
Author(s): Francisco M. Couto, André Lamúrias
Software Mentions: 5
Published: almost 6 years ago
10.3389/fncir.2019.00005
DVID: Distributed Versioned Image-Oriented DataserviceCited by: 24
Author(s): William T. Katz, Stephen M. Plaza
Software Mentions: 4
Published: over 5 years ago
10.3390/s21124002
OPAL—The Toolbox for the Integration and Analysis of IoT in a Semantically Annotated WayCited by: 0
Author(s): Philipp Hertweck, Tobias Hellmund, Jürgen Moßgraber
Software Mentions: 4
Published: about 3 years ago
10.1371/journal.pcbi.1004008
A RESTful API for Accessing Microbial Community Data for MG-RASTCited by: 62
Author(s): Andreas Wilke, Jared Bischof, Travis Harrison, Tom Brettin, Mark D’Souza, Wolfgang Gerlach, Hunter Matthews, Tobias Paczian, Jared Wilkening, Elizabeth M. Glass, Narayan Desai, Folker Meyer
Software Mentions: 3
Published: over 9 years ago
10.1140/epjds/s13688-021-00259-w
Dark Web Marketplaces and COVID-19: before the vaccineCited by: 26
Author(s): Alberto Bracci, Matthieu Nadini, Maxwell Aliapoulios, Damon McCoy, Ian Gray, Alexander Teytelboym, Angela Gallo, Andrea Baronchelli
Software Mentions: 3
Published: over 3 years ago
10.1093/gigascience/giy150
Annotation of the<i>Giardia</i>proteome through structure-based homology and machine learningCited by: 19
Author(s): Brendan R E Ansell, Bernard J. Pope, Peter Georgeson, Samantha J. Emery-Corbin, Aaron R. Jex
Software Mentions: 3
Published: almost 6 years ago
10.1371/journal.pone.0179130
biochem4j: Integrated and extensible biochemical knowledge through graph databasesCited by: 28
Author(s): Neil Swainston, Riza Theresa Batista-Navarro, Pablo Carbonell, Paul D. Dobson, Mark S. Dunstan, Adrian J. Jervis, María Vinaixa, Alan Williams, Sophia Ananiadou, Jean-Loup Faulon, Pedro Mendes, Douglas B. Kell, Nigel S. Scrutton, Rainer Breitling
Software Mentions: 2
Published: about 7 years ago
10.1016/j.mcpro.2021.100102
Nuclear Phosphatidylinositol 3,4,5-Trisphosphate Interactome Uncovers an Enrichment in Nucleolar ProteinsCited by: 5
Author(s): Fatemeh Mazloumi Gavgani, Malene Skuseth Slinning, Andrea Papdiné Morovicz, Victoria Smith Arnesen, Diana Cornelia Turcu, Sandra Ninzima, Clive S. D’Santos, Aurélia E. Lewis
Software Mentions: 2
Published: over 3 years ago
10.3389/fncom.2019.00074
Neuronal Morphology and Synapse Count in the Nematode WormCited by: 2
Author(s): Robert M. Friedman
Software Mentions: 2
Published: almost 5 years ago
10.1093/bioinformatics/bty925
ukbREST: efficient and streamlined data access for reproducible research in large biobanksCited by: 6
Author(s): Milton Pividori, Hae Kyung Im
Software Mentions: 2
Published: almost 6 years ago
10.5808/GI.2019.17.2.e21
Improving spaCy dependency annotation and PoS tagging web service using independent NER servicesCited by: 8
Author(s): Nicola Colic, Fabio Rinaldi
Software Mentions: 2
Published: about 5 years ago
10.2196/cancer.9050
Assessing Unmet Information Needs of Breast Cancer Survivors: Exploratory Study of Online Health Forums Using Text Classification and RetrievalCited by: 27
Author(s): Susan McRoy, Majid Rastegar-Mojarad, Yanshan Wang, Kathryn J. Ruddy, Tufia C. Haddad, Hongfang Liu
Software Mentions: 1
Published: over 6 years ago
10.1007/s40708-015-0024-0
HAFNI-enabled largescale platform for neuroimaging informatics (HELPNI)Cited by: 14
Author(s): Milad Makkie, Shijie Zhao, Xi Jiang, Jinglei Lv, Yu Zhao, Bao Ge, Xiang Li, Junwei Han, Tianming Liu
Software Mentions: 1
Published: almost 9 years ago
10.1093/database/bax060
A RESTful application programming interface for the PubMLST molecular typing and genome databasesCited by: 26
Author(s): Keith A. Jolley, James E. Bray, Martin C. J. Maiden
Software Mentions: 1
Published: over 7 years ago