Data

Tools

Indexes

Applications

Experiments

Papers

pypi projects 9,932

pypi: FPC
Frank's Personal Conllection
Papers that mentioned: 89
Very Likely Science (65)
pypi: google
Python bindings to the Google search engine.
Papers that mentioned: 88
Very Likely Science (65)
pypi: tmap
A topological data analysis framework implementing the TDA Mapper algorithm for population-scale microbiome data analysis
Papers that mentioned: 88
Very Likely Science (100)
pypi: Sphinx
Python documentation generator
Papers that mentioned: 88
Very Likely Science (80)
pypi: profiler
Simple tool to make profiling easy.
Papers that mentioned: 88
Very Likely Science (65)
pypi: statistics
A Python 2.* port of 3.4 Statistics Module
Papers that mentioned: 86
Very Likely Science (90)
pypi: qtl
Utilities for analyzing and visualizing QTL data
Papers that mentioned: 86
Very Likely Science (80)
pypi: genetics
Genetic Algorithm in Python, which could be used for Sampling, Feature Select, Model Select, etc in Machine Learning
Papers that mentioned: 86
Very Likely Science (90)
pypi: SDK
Unified data transmission interface
Papers that mentioned: 86
Very Likely Science (65)
pypi: Tango
Tango mobile web optimization framework.
Papers that mentioned: 85
Very Likely Science (75)
pypi: CGAL
CGAL bindings, allowing to use some of the CGAL library in Python.
Papers that mentioned: 85
Very Likely Science (100)
pypi: Hydra
A high performance persistent bloom filter
Papers that mentioned: 84
Very Likely Science (65)
pypi: ACEMD
Papers that mentioned: 84
Very Likely Science (80)
pypi: Magics
Python interface to plot meteorological data in GRIB, NetCDF and BUFR.
Papers that mentioned: 83
Very Likely Science (100)
pypi: Benchling
Papers that mentioned: 83
Very Likely Science (65)
pypi: effects
Smart, pythonic, ad-hoc, typed polymorphism for Python
Papers that mentioned: 82
Very Likely Science (65)
pypi: arm
Papers that mentioned: 82
Very Likely Science (65)
pypi: base
Papers that mentioned: 82
Very Likely Science (65)
pypi: TreeTime
TreeTime is a to-do list manager, test report tool, project manager, family ancestry editor,mind-mapping tool, etc. Using TreeTime you can categorise and organise any data in tree structures.You can define several trees, each with a different structure, on the same data. You can use functions(sums, ratios and means) recursively up the branches of a tree.
Papers that mentioned: 82
Likely Science (40)
pypi: denovo
handy tools and classes for a new python package
Papers that mentioned: 82
Very Likely Science (85)
pypi: DIRECT
Python wrapper to the DIRECT algorithm
Papers that mentioned: 81
Very Likely Science (90)
pypi: Philips
A bunch of utility functions created during classroom practice
Papers that mentioned: 81
Likely Science (40)
pypi: Dataviewer
Dataviewer for project files
Papers that mentioned: 81
Very Likely Science (65)
pypi: Wikidata
Wikidata client library
Papers that mentioned: 81
Very Likely Science (80)
pypi: align
Analyzing Linguistic Interaction with Generalizable techNiques. Read the latest ALIGN tutorials.
Papers that mentioned: 80
Very Likely Science (100)
pypi: awk
A library to provide advanced awk-like functionalities for file manipulation in Python.
Papers that mentioned: 80
Very Likely Science (65)
pypi: vcd
Video Content Description (VCD) library
Papers that mentioned: 80
Very Likely Science (80)
pypi: gromacs
GROMACS bindings package
Papers that mentioned: 79
Very Likely Science (100)
pypi: CIRCexplorer2
Circular RNA analysis toolkits
Papers that mentioned: 79
Very Likely Science (100)
pypi: XBee
Python tools for working with XBee radios
Papers that mentioned: 78
Very Likely Science (75)
pypi: co
Python library for making and tracking mutated copies of DNA components
Papers that mentioned: 78
Likely Science (55)
pypi: Operon
Dataflow pipeline development framework, powered by Parsl
Papers that mentioned: 78
Very Likely Science (100)
pypi: tableone
A small example package
Papers that mentioned: 78
Very Likely Science (80)
pypi: radiomics
A radiomics implementation in python
Papers that mentioned: 77
Very Likely Science (71)
pypi: refine
tool for data processing pipelines
Papers that mentioned: 77
Very Likely Science (65)
pypi: autodock
Daemon for Docker Automation
Papers that mentioned: 77
Likely Science (40)
pypi: PLM
Bidirectional ELM neural network implementation for regression problem
Papers that mentioned: 77
Very Likely Science (90)
pypi: snippy
Snippy is a software development and maintenance notes manager.
Papers that mentioned: 77
Very Likely Science (65)
pypi: circular
Visualize the latest circular from the Somerville Market Basket
Papers that mentioned: 77
Very Likely Science (65)
pypi: starbase
Python client for HBase Stargate REST server
Papers that mentioned: 76
Very Likely Science (65)
pypi: decontam
Decontaminate paired-end DNA sequencing data
Papers that mentioned: 76
Very Likely Science (75)
pypi: Tesla
Pylons template with Elixir ORM bindings
Papers that mentioned: 76
Very Likely Science (65)
pypi: view
Amazing RestAPI Wrapper!
Papers that mentioned: 76
Very Likely Science (65)
pypi: atlas
Atlas Build Tool - simple, extensible build system.
Papers that mentioned: 75
Very Likely Science (65)
pypi: SimpleITK
SimpleITK is a simplified interface to the Insight Toolkit (ITK) for image registration and segmentation
Papers that mentioned: 74
Very Likely Science (100)
pypi: TOM
Tiny Object Model for XML
Papers that mentioned: 73
Very Likely Science (65)
pypi: Gitools
A handy tool to modify git history
Papers that mentioned: 73
Very Likely Science (65)
pypi: PARS
Project which enable automatic downloading data from pfam and rfam databases
Papers that mentioned: 73
Very Likely Science (65)
pypi: Acquisition
Acquisition is a mechanism that allows objects to obtain attributes from the containment hierarchy they're in.
Papers that mentioned: 72
Very Likely Science (84)
pypi: ns
Simply declaring namespaces
Papers that mentioned: 72
Very Likely Science (65)
pypi: Proctor
Proctor Test Runner
Papers that mentioned: 72
Very Likely Science (65)
pypi: MACE
Papers that mentioned: 72
Very Likely Science (65)
pypi: sim
simulate
Papers that mentioned: 71
Very Likely Science (65)
pypi: tensorflow
TensorFlow is an open source machine learning framework for everyone.
Papers that mentioned: 71
Very Likely Science (90)
pypi: GDAL
GDAL: Geospatial Data Abstraction Library
Papers that mentioned: 71
Very Likely Science (90)
pypi: pytorch
Papers that mentioned: 71
Very Likely Science (90)
pypi: Tcl
A coding language used for Graphical user interface
Papers that mentioned: 70
Very Likely Science (65)
pypi: Distiller
Automatic Keyword Extraction from Document Collections
Papers that mentioned: 70
Very Likely Science (65)
pypi: circ
A basic CLI to make mosaic vrts using ctx imagery
Papers that mentioned: 69
Very Likely Science (100)
pypi: js
Root directory for Fanstatic packages
Papers that mentioned: 69
Very Likely Science (65)
pypi: searchlight
OpenStack Search Service
Papers that mentioned: 69
Very Likely Science (65)
pypi: msm
Mycroft Skills Manager
Papers that mentioned: 69
Very Likely Science (80)
pypi: CrossMap
Lift over genomics coordinates between assemblies
Papers that mentioned: 68
Very Likely Science (90)
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68
Very Likely Science (100)
pypi: xcms
calculated extended contact mode score provided the query and template protein-ligand structures
Papers that mentioned: 68
Likely Science (55)
pypi: diamond
Smart data producer for graphite graphing package
Papers that mentioned: 68
Very Likely Science (100)
pypi: javascript
Call and interop Node.js APIs with Python
Papers that mentioned: 68
Very Likely Science (65)
pypi: SUPPA
A tool to study splicing across multiple conditions at high speed and accuracy.
Papers that mentioned: 67
Very Likely Science (100)
pypi: Mosaic
Mosaic poster composer
Papers that mentioned: 67
Very Likely Science (80)
pypi: GMM
This package provides a basic framework and supporting functionality for generating network structure network structure using graph motifs.
Papers that mentioned: 67
Very Likely Science (75)
pypi: rma
Utilities to profile Redis RAM usage
Papers that mentioned: 67
Likely Science (40)
pypi: software
...
Papers that mentioned: 67
Very Likely Science (65)
pypi: sna
Search N Act
Papers that mentioned: 67
Very Likely Science (65)
pypi: Jim
library to retrieve data from German railways
Papers that mentioned: 66
Very Likely Science (65)
pypi: real
Papers that mentioned: 66
Very Likely Science (65)
pypi: visual
Papers that mentioned: 66
Unlikely Science (0)
pypi: Sketch
Compute, store and operate on data sketches
Papers that mentioned: 66
Very Likely Science (65)
pypi: AVISO
A library to handle altimetric data produced by AVISO
Papers that mentioned: 66
Very Likely Science (80)
pypi: AMD
Advanced Data Science enabled Data extraction and control library for Arduino with accurate Data Visualizations !.
Papers that mentioned: 66
Very Likely Science (75)
pypi: PCIT
Predictive Conditional Independence Testing
Papers that mentioned: 66
Very Likely Science (65)
pypi: eddy
Static site generator with markdown support
Papers that mentioned: 66
Very Likely Science (65)
pypi: PhiSpy
Prophage finder using multiple metrics
Papers that mentioned: 66
Very Likely Science (100)
pypi: phylogeny
An exploration of algorithms for phylogeny reconstruction.
Papers that mentioned: 65
Very Likely Science (90)
pypi: bash
Bash for Python
Papers that mentioned: 65
Very Likely Science (65)
pypi: portal
Interact with Apple's Provisioning Portal, stay sane
Papers that mentioned: 65
Very Likely Science (65)
pypi: mummichog
Pathway and network analysis for metabolomics data
Papers that mentioned: 65
Very Likely Science (100)
pypi: Universal
Universal Competitive Programming Suite helps you work faster in programming competitions
Papers that mentioned: 65
Very Likely Science (65)
pypi: net
A Powerfull Networking Package For Servers/LocalHosts ETC
Papers that mentioned: 64
Very Likely Science (75)
pypi: Origami
Lightweight bit packing for classes
Papers that mentioned: 64
Very Likely Science (65)
pypi: 5
a test mod
Papers that mentioned: 64
Very Likely Science (65)
pypi: mlr
Linear regression utility with inference tests, residual analysis, outlier visualization, multicollinearity test, and other features
Papers that mentioned: 64
Likely Science (40)
pypi: segmented
segmented: A toolbox for segmented regression.
Papers that mentioned: 64
Very Likely Science (95)
pypi: Catwalk
A way to view your models using TurboGears
Papers that mentioned: 64
Very Likely Science (65)
pypi: gmap
A package that prints 'Hello, World!'
Papers that mentioned: 64
Very Likely Science (65)
pypi: Rhino
A microframework for building RESTful web services
Papers that mentioned: 63
Very Likely Science (65)
pypi: Crossbow
Papers that mentioned: 63
Very Likely Science (65)
pypi: impute
Gene imputation tools for founder populations.
Papers that mentioned: 63
Very Likely Science (65)
pypi: plot
A matplotlib frontend executable using JSON file as user input
Papers that mentioned: 63
Very Likely Science (65)
pypi: Avatar
Avatar generator.
Papers that mentioned: 63
Very Likely Science (65)
pypi: kmeans
python wrapper for basic c implementation of kmeans
Papers that mentioned: 62
Very Likely Science (65)