Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
pypi projects 9,932
pypi: tmap
A topological data analysis framework implementing the TDA Mapper algorithm for population-scale microbiome data analysisPapers that mentioned: 88
pypi: genetics
Genetic Algorithm in Python, which could be used for Sampling, Feature Select, Model Select, etc in Machine LearningPapers that mentioned: 86
pypi: CGAL
CGAL bindings, allowing to use some of the CGAL library in Python.Papers that mentioned: 85
pypi: Magics
Python interface to plot meteorological data in GRIB, NetCDF and BUFR.Papers that mentioned: 83
pypi: TreeTime
TreeTime is a to-do list manager, test report tool, project manager, family ancestry editor,mind-mapping tool, etc. Using TreeTime you can categorise and organise any data in tree structures.You can define several trees, each with a different structure, on the same data. You can use functions(sums, ratios and means) recursively up the branches of a tree.Papers that mentioned: 82
pypi: Philips
A bunch of utility functions created during classroom practicePapers that mentioned: 81
pypi: awk
A library to provide advanced awk-like functionalities for file manipulation in Python.Papers that mentioned: 80
pypi: align
Analyzing Linguistic Interaction with Generalizable techNiques. Read the latest ALIGN tutorials.Papers that mentioned: 80
pypi: co
Python library for making and tracking mutated copies of DNA componentsPapers that mentioned: 78
pypi: circular
Visualize the latest circular from the Somerville Market BasketPapers that mentioned: 77
pypi: snippy
Snippy is a software development and maintenance notes manager.Papers that mentioned: 77
pypi: PLM
Bidirectional ELM neural network implementation for regression problemPapers that mentioned: 77
pypi: SimpleITK
SimpleITK is a simplified interface to the Insight Toolkit (ITK) for image registration and segmentationPapers that mentioned: 74
pypi: PARS
Project which enable automatic downloading data from pfam and rfam databasesPapers that mentioned: 73
pypi: Acquisition
Acquisition is a mechanism that allows objects to obtain attributes from the containment hierarchy they're in.Papers that mentioned: 72
pypi: tensorflow
TensorFlow is an open source machine learning framework for everyone.Papers that mentioned: 71
pypi: xcms
calculated extended contact mode score provided the query and template protein-ligand structuresPapers that mentioned: 68
pypi: GMM
This package provides a basic framework and supporting functionality for generating network structure network structure using graph motifs.Papers that mentioned: 67
pypi: SUPPA
A tool to study splicing across multiple conditions at high speed and accuracy.Papers that mentioned: 67
pypi: visual
Papers that mentioned: 66pypi: AMD
Advanced Data Science enabled Data extraction and control library for Arduino with accurate Data Visualizations !.Papers that mentioned: 66
pypi: phylogeny
An exploration of algorithms for phylogeny reconstruction.Papers that mentioned: 65
pypi: Universal
Universal Competitive Programming Suite helps you work faster in programming competitionsPapers that mentioned: 65
pypi: mlr
Linear regression utility with inference tests, residual analysis, outlier visualization, multicollinearity test, and other featuresPapers that mentioned: 64