Ecosyste.ms: Papers

10.15252/msb.20209539

Predictive features of gene expression variation reveal mechanistic link with differential expression
Cited by: 36
Author(s): Olga M. Sigalova, Amirreza Shaeiri, Mattia Forneris, Eileen E. M. Furlong, Judith B. Zaugg
Software Mentions: 30
Published: about 4 years ago

10.1007/s00122-020-03716-8

Linear models for diallel crosses: a review with R functions
Cited by: 11
Author(s): Andrea Onofri, Niccolò Terzaroli, Luigi Russi
Software Mentions: 19
Published: almost 4 years ago

10.1186/s12859-021-04261-x

Machine learning-based prediction of survival prognosis in cervical cancer
Cited by: 16
Author(s): Dongyan Ding, Tingyuan Lang, Dongling Zou, Jianrong Tan, Jia Chen, Lei Zhou, Dong Wang, Rong Li, Yunzhe Li, Jingshu Liu, Cui Ma, Qi Zhou
Software Mentions: 14
Published: over 3 years ago

10.1099/mgen.0.000583

rMAP: the Rapid Microbial Analysis Pipeline for ESKAPE bacterial group whole-genome sequence data
Cited by: 5
Author(s): Ivan Sserwadda, Gerald Mboowa
Software Mentions: 13
Published: over 3 years ago

10.1038/s41398-021-01596-0

Autoantibody profiles associated with clinical features in psychotic disorders
Cited by: 6
Author(s): August Jernbom Falk, Cherrie Galletly, David R. Just, Catherine Toben, Bernhard T. Baune, Scott Clark, Dennis Liu, Peter Nilsson, Anna Månberg, Klaus Oliver Schubert
Software Mentions: 13
Published: about 3 years ago

10.3390/ijerph17124268

Association of Nap Duration after Lunch with Prevalence of Metabolic Syndrome in a Chinese Government Employee Population
Cited by: 13
Author(s): Jing He, Feiyun Ouyang, Dan Qiu, Yanying Duan, Dan Luo, Shuiyuan Xiao
Software Mentions: 12
Published: over 4 years ago

10.1186/s12911-017-0500-y

Predicting two-year survival versus non-survival after first myocardial infarction using machine learning and Swedish national register data
Cited by: 53
Author(s): John Wallert, Mattia Tomasoni, Guy Madison, Claes Held
Software Mentions: 12
Published: about 7 years ago

10.1002/cam4.4092

Gene signatures predict biochemical recurrence‐free survival in primary prostate cancer patients after radical therapy
Cited by: 6
Author(s): Qiang Su, Zhenyu Liu, Chi Chen, Han Gao, Yongbei Zhu, Liusu Wang, Meiqing Pan, Jiangang Liu, Xin Yang, Jie Tian
Software Mentions: 12
Published: about 3 years ago

10.1186/s12885-021-07924-3

A geospatiotemporal and causal inference epidemiological exploration of substance and cannabinoid exposure as drivers of rising US pediatric cancer rates
Cited by: 26
Author(s): Albert Stuart Reece, Gary Kenneth Hulse
Software Mentions: 11
Published: over 3 years ago

10.2196/jmir.9710

Internet-Based Cognitive Behavioral Therapy for Symptoms of Depression and Anxiety Among Patients With a Recent Myocardial Infarction: The U-CARE Heart Randomized Controlled Trial
Cited by: 66
Author(s): Fredrika Norlund, Emma Wallin, Erik Olsson, John Wallert, Gunilla Burell, Louise von Essén, Claes Held
Software Mentions: 11
Published: over 6 years ago

10.3390/ijerph18041816

Academic Achievement in Spanish Secondary School Students: The Inter-Related Role of Executive Functions, Physical Activity and Gender
Cited by: 7
Author(s): Elena Escolano Pérez, Marta Bestué
Software Mentions: 11
Published: over 3 years ago

10.3389/fnagi.2018.00144

Differentiating Patients at the Memory Clinic With Simple Reaction Time Variables: A Predictive Modeling Approach Using Support Vector Machines and Bayesian Optimization
Cited by: 9
Author(s): John Wallert, Eric Westman, Johnny Ulinder, Mathilde Annerstedt, Beata Terzis, Urban Ekman
Software Mentions: 10
Published: over 6 years ago

10.1186/s13046-019-1212-1

The kinase inhibitor SI113 induces autophagy and synergizes with quinacrine in hindering the growth of human glioblastoma multiforme cells
Cited by: 23
Author(s): Silvia Matteoni, Claudia Abbruzzese, Paola Matarrese, Gabriele De Luca, Anna Maria Mileo, Stefania Miccadei, Silvia Schenone, Francesca Musumeci, Tobias Haas, Giovanni Sette, Carmine Maria Carapella, Rosario Amato, Nicola Perrotti, Michele Signore, Marco G. Paggi
Software Mentions: 10
Published: over 5 years ago

10.3390/cancers13133175

Transcript-Level Dysregulation of BCL2 Family Genes in Acute Myeloblastic Leukemia
Cited by: 7
Author(s): Luiza Handschuh, Paweł Wojciechowski, Maciej Kaźmierczak, K Lewandowski
Software Mentions: 10
Published: about 3 years ago

10.3389/fimmu.2021.641495

Mitochondrial Reactive Oxygen Species Regulate Immune Responses of Macrophages to Aspergillus fumigatus
Cited by: 15
Author(s): Rémi Hatinguais, Arnab Pradhan, Gordon D. Brown, Alistair J. P. Brown, Adilia Warris, Elena Shekhova
Software Mentions: 10
Published: over 3 years ago

10.1038/s41419-019-1775-y

A new bioavailable fenretinide formulation with antiproliferative, antimetabolic, and cytotoxic effects on solid tumors
Cited by: 34
Author(s): Isabella Orienti, Federica Francescangeli, Maria Laura De Angelis, Katia Fecchi, Lucilla Bongiorno-Borbone, Michele Signore, Angelo Peschiaroli, Alessandra Boe, Alessandro Bruselles, Angelita Costantino, Adriana Eramo, Valentina Salvati, Giovanni Sette, Paola Contavalli, Lello Zolla, Toshihiko Oki, Toshio Kitamura, Massimo Spada, Alessandro Giuliani, Marta Baiocchi, Filippo La Torre, Gerry Melino, Marco Tartaglia, Ruggero De Maria, Ann Zeuner
Software Mentions: 9
Published: about 5 years ago

10.1186/s12967-018-1608-2

NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome
Cited by: 13
Author(s): Luiza Handschuh, Paweł Wojciechowski, Maciej Kaźmierczak, Małgorzata Marcinkowska-Swojak, Magdalena Łuczak, Krzysztof Lewandowski, Mieczysław Komarnicki, Jacek Błażewicz, Marek Figlerowicz, Piotr Kozlowski
Software Mentions: 9
Published: about 6 years ago

10.1186/s13073-021-00902-1

Integrative statistical analyses of multiple liquid biopsy analytes in metastatic breast cancer
Cited by: 16
Author(s): Corinna Keup, Vinay Suryaprakash, Siegfried Hauch, Markus Storbeck, Peter F. Hahn, Markus Sprenger-Haussels, Hans‐Christian Kolberg, Mitra Tewes, Oliver Hoffmann, Rainer Kimmig, Sabine Kasimir‐Bauer
Software Mentions: 9
Published: over 3 years ago

10.3389/fonc.2020.578895

Radiomics Feature Activation Maps as a New Tool for Signature Interpretability
Cited by: 17
Author(s): Diem Vuong, Stephanie Tanadini‐Lang, Ze Wu, Robert J. Marks, Jan Unkelbach, Sven Hillinger, Eric Innocents Eboulet, Sandra Thierstein, Solange Peters, Miklos Pless, Matthias Gückenberger, Marta Bogowicz
Software Mentions: 9
Published: almost 4 years ago

10.3389/fneur.2021.681140

Using Base-ml to Learn Classification of Common Vestibular Disorders on DizzyReg Registry Data
Cited by: 3
Author(s): Gerome Vivar, Ralf Strobl, Eva Grill, Nassir Navab, Andreas Zwergal, Seyed-Ahmad Ahmadi
Software Mentions: 9
Published: about 3 years ago

10.1186/s13550-021-00809-3

Preselection of robust radiomic features does not improve outcome modelling in non-small cell lung cancer based on clinical routine FDG-PET imaging
Cited by: 7
Author(s): Carol Oliveira, Florian Amstutz, Diem Vuong, Marta Bogowicz, Martin Hüllner, R. E. Forster, Lucas Basler, Christina Schröder, Eric Innocents Eboulet, Miklos Pless, Sandra Thierstein, Solange Peters, Sven Hillinger, Stephanie Tanadini‐Lang, Matthias Gückenberger
Software Mentions: 9
Published: about 3 years ago

10.1371/journal.pone.0179623

Estimating the basic reproduction rate of HFMD using the time series SIR model in Guangdong, China
Cited by: 28
Author(s): Zhicheng Du, Wangjian Zhang, Dingmei Zhang, Shicheng Yu, Yuantao Hao
Software Mentions: 8
Published: about 7 years ago

10.3390/cancers13143621

HPV Infection Leaves a DNA Methylation Signature in Oropharyngeal Cancer Affecting Both Coding Genes and Transposable Elements
Cited by: 10
Author(s): Diego Camuzi, Luisa Aguirre Buexm, Simone De Queiroz Chaves Lourenço, Davide Degli Esposti, Cyrille Cuenin, Monique de Souza Almeida Lopes, Francesca Manara, Fazlur Rahman Talukdar, Zdenko Herceg, Luís Felipe Ribeiro Pinto, Sheila Coelho Soares-Lima
Software Mentions: 8
Published: about 3 years ago

10.1016/j.diabres.2019.01.008

Differential methylation of the type 2 diabetes susceptibility locus KCNQ1 is associated with insulin sensitivity and is predicted by CpG site specific genetic variation
Cited by: 14
Author(s): Ushma Jaykamal Shah, Wenting Xie, Allan Flyvbjerg, John J. Nolan, Kurt Højlund, Mark Walker, Caroline L Relton, Hannah R Elliott
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0239081

Diazotrophic bacteria from maize exhibit multifaceted plant growth promotion traits in multiple hosts
Cited by: 11
Author(s): Shawn M. Higdon, Tania Pozzo, Emily J. Tibbett, Colleen Chiu, Richard Jeannotte, Bart C. Weimer, A. B. Bennett
Software Mentions: 7
Published: about 4 years ago

10.1371/journal.pgen.1004900

An Intracellular Transcriptomic Atlas of the Giant Coenocyte Caulerpa taxifolia
Cited by: 41
Author(s): Aashish Ranjan, Brad T. Townsley, Yasunori Ichihashi, Neelima Sinha, Daniel H. Chitwood
Software Mentions: 7
Published: over 9 years ago

10.1371/journal.pone.0158911

Wolves Recolonizing Islands: Genetic Consequences and Implications for Conservation and Management
Cited by: 8
Author(s): Liivi Plumer, Marju Keis, Jaanus Remm, Maris Hindrikson, I. Jõgisalu, Peep Männil, Marko Kübarsepp, Urmas Saarma
Software Mentions: 7
Published: about 8 years ago

10.3390/toxins11110624

Analysis of the Use of Cylindrospermopsin and/or Microcystin-Contaminated Water in the Growth, Mineral Content, and Contamination of Spinacia oleracea and Lactuca sativa
Cited by: 22
Author(s): María Llana-Ruiz-Cabello, Ángeles Jos, Ana M. Cameán, Flávio Luís de Oliveira, Aldo Barreiro Felpeto, J.A.T. Machado, Joana Azevedo, Edgar Pinto, Agostinho Almeida, Alexandre Campos, Vítor Vasconcelos, Marisa Freitas
Software Mentions: 6
Published: almost 5 years ago

10.1038/s41396-021-00939-5

Competition between strains of Borrelia afzelii in the host tissues and consequences for transmission to ticks
Cited by: 7
Author(s): Dolores Genné, Marika Rossel, Anouk Sarr, Florian Battilotti, Olivier Rais, Ryan O. M. Rego, Maarten J. Voordouw
Software Mentions: 6
Published: over 3 years ago

10.1186/gb-2005-6-9-r76

Cited by: 122
Author(s): Stephen Henderson, David B. Guiliano, Nadège Presneau, Sean R. McLean, Richard Frow, Sonja Vujovic, John Anderson, Neil J. Sebire, Jeremy Whelan, Nick Athanasou, Adrienne M. Flanagan, Chris Boshoff
Software Mentions: 6
Published: over 19 years ago

10.3389/fvets.2020.594825

Slightly and Moderately Lame Cows in Tie Stalls Behave Differently From Non-lame Controls. A Matched Case-Control Study
Cited by: 1
Author(s): Johanna Karin Bernhard, Beatriz Vidondo, Rahel Lisa Achermann, Rahel Rediger, Dimitri Stucki, Kerstin Müller, Adrian Steiner
Software Mentions: 6
Published: almost 4 years ago

10.1128/mSystems.00344-21

Network Properties of Local Fungal Communities Reveal the Anthropogenic Disturbance Consequences of Farming Practices in Vineyard Soils
Cited by: 10
Author(s): Rüdiger Ortiz‐Álvarez, Héctor Ortega-Arranz, Vicente J. Ontiveros, Miguel de Celis, Charles N. J. Ravarani, Alberto Acedo, Ignacio Belda
Software Mentions: 5
Published: about 3 years ago

10.1186/s12863-020-0821-1

Genotype-by-environment interaction in coast redwood outside natural distribution - search for environmental cues
Cited by: 6
Author(s): Jaroslav Klápště, Dean F. Meason, Heidi S. Dungey, Emily Telfer, Paul Silcock, Simon Rapley
Software Mentions: 5
Published: over 4 years ago

10.1002/brb3.1788

There is No test–retest reliability of brain activation induced by robotic passive hand movement: A functional NIRS study
Cited by: 3
Author(s): Sung-Jin Bae, Yonghee Lee, Pyung Hun Chang
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pone.0088805

Molecular Phylogenetics and Temporal Diversification in the Genus Aeromonas Based on the Sequences of Five Housekeeping Genes
Cited by: 13
Author(s): J. Gaspar Lorén, Maribel Farfán, M. Carmen Fusté
Software Mentions: 5
Published: over 10 years ago

10.1186/1868-7083-6-4

Differences in smoking associated DNA methylation patterns in South Asians and Europeans
Cited by: 227
Author(s): Hannah R Elliott, Therese Tillin, Wendy L. McArdle, Karen Ho, Aparna Duggirala, Tim Frayling, George Davey Smith, Alun D. Hughes, Nish Chaturvedi, Caroline L Relton
Software Mentions: 5
Published: over 10 years ago

10.1002/ece3.6650

A landscape‐scale assessment of the relationship between grassland functioning, community diversity, and functional traits
Cited by: 7
Author(s): Hanneke van ‘t Veen, Loïc Chalmandrier, Nadine Sandau, Michael P. Nobis, Patrice Descombes, Achilleas Psomas, Yann Hautier, Loïc Pellissier
Software Mentions: 5
Published: about 4 years ago

10.3389/fgene.2021.644516

G2S: A New Deep Learning Tool for Predicting Stool Microbiome Structure From Oral Microbiome Data
Cited by: 5
Author(s): Simone Rampelli, Marco Fabbrini, Marco Candela, Elena Biagi, Patrizia Brigidi, Silvia Turroni
Software Mentions: 5
Published: over 3 years ago

10.3390/genes12060842

De Novo Transcriptome Meta-Assembly of the Mixotrophic Freshwater Microalga Euglena gracilis
Cited by: 5
Author(s): J.M. Córdoba, Emilie Perez, Mick Van Vlierberghe, Amandine Bertrand, Valérian Lupo, Pierre Cardol, Denis Baurain
Software Mentions: 5
Published: over 3 years ago

10.1080/01652176.2020.1745317

Effects of hypersensitivity disorders and environmental factors on the equine intestinal microbiota
Cited by: 11
Author(s): Sarah Kaiser‐Thom, Markus Hilty, Vinzenz Gerber
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0097620

DNA Barcoding and the Associated PhylAphidB@se Website for the Identification of European Aphids (Insecta: Hemiptera: Aphididae)
Cited by: 41
Author(s): Armelle Coeur d’Acier, Astrid Cruaud, Emmanuelle Artige, Guénaëlle Genson, Anne Laure Clamens, Éric Pierre, Sylvie Hudaverdian, Jean‐Christophe Simon, Emmanuelle Jousselin, Jean‐Yves Rasplus
Software Mentions: 4
Published: over 10 years ago

10.1371/journal.pone.0078546

Whole-Genome Pathway Analysis on 132,497 Individuals Identifies Novel Gene-Sets Associated with Body Mass Index
Cited by: 4
Author(s): Matthew A. Simonson, Matthew B. McQueen, Matthew C. Keller
Software Mentions: 4
Published: over 10 years ago

10.4269/ajtmh.19-0244

Environmental Determinants of Aedes albopictus Abundance at a Northern Limit of Its Range in the United States
Cited by: 16
Author(s): Pallavi A Kache, Gillian Eastwood, Kaitlin Collins-Palmer, Marly B. Katz, Richard C. Falco, Waheed I. Bajwa, Philip M. Armstrong, Theodore G. Andreadis, Maria A. Diuk‐Wasser
Software Mentions: 4
Published: over 4 years ago

10.3390/brainsci11020230

Sentence Recall in Latent and Anomic Aphasia: An Exploratory Study of Semantics and Syntax
Cited by: 6
Author(s): Christos Salis, Nadine Martin, Laura K. Reinert
Software Mentions: 4
Published: over 3 years ago

10.3389/fphys.2020.609335

Exhaustive Exercise and Post-exercise Protein Plus Carbohydrate Supplementation Affect Plasma and Urine Concentrations of Sulfur Amino Acids, the Ratio of Methionine to Homocysteine and Glutathione in Elite Male Cyclists
Cited by: 8
Author(s): Trond E. Olsen, Ove Sollie, Eha Nurk, Cheryl Turner, Fredrik Jernerén, John L. Ivy, Kathrine J. Vinknes, Matthieu Clauss, Helga Refsum, Jørgen Jensen
Software Mentions: 4
Published: almost 4 years ago

10.3389/fcimb.2019.00431

Competition Between Strains of Borrelia afzelii in Immature Ixodes ricinus Ticks Is Not Affected by Season
Cited by: 10
Author(s): Dolores Genné, Anouk Sarr, Olivier Rais, Maarten J. Voordouw
Software Mentions: 4
Published: over 4 years ago

10.3390/s21020416

CNN-Based Suppression of False Contour and Color Distortion in Bit-Depth Enhancement
Cited by: 4
Author(s): Changmeng Peng, Luting Cai, Xiaoyang Huang, Fu Zhang, Jin Xu, Xiaofeng Li
Software Mentions: 4
Published: over 3 years ago

10.3389/fvets.2021.714143

Providing Humans With Practical, Best Practice Handling Guidelines During Human-Cat Interactions Increases Cats' Affiliative Behaviour and Reduces Aggression and Signs of Conflict
Cited by: 9
Author(s): Camilla Haywood, Lucia Ripari, Jo Puzzo, Rachel Foreman-Worsley, Lauren Finka
Software Mentions: 4
Published: about 3 years ago

10.1186/1471-213X-13-13

miRNA regulated pathways in late stage murine lung development
Cited by: 47
Author(s): Sana Mujahid, Tanya Logvinenko, MaryAnn V. Volpe, Heber C. Nielsen
Software Mentions: 4
Published: over 11 years ago

10.1016/j.gpb.2018.11.002

Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11,087 Clinical Isolates
Cited by: 8
Author(s): Valentina Galata, Cédric Christian Laczny, Christina Backes, Georg Hemmrich-Stanisak, Susanne Schmolke, André Franke, Eckart Meese, Mathias Herrmann, Lutz von Müller, Achim Plum, Rolf Müller, Cord Stähler, Andreas E. Posch
Software Mentions: 4
Published: over 5 years ago

10.3389/fgene.2020.00952

The Association Analysis of GPNMB rs156429 With Clinical Manifestations in Chinese Population With Parkinson's Disease
Cited by: 1
Author(s): Jin Liu, Gen Li, Yanfang He, Guoping He, Pingchen Zhang, Xin Shen, Weishan Zhang, Shengdi Chen, Shishuang Cui, Yuyan Tan
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0054956

Habitat Characteristics of Forest Fragments Determine Specialisation of Plant-Frugivore Networks in a Mosaic Forest Landscape
Cited by: 25
Author(s): Lackson Chama, Dana G. Berens, Colleen T. Downs, Nina Farwig
Software Mentions: 3
Published: over 11 years ago

10.1016/j.isci.2021.102816

The gut microbiome buffers dietary adaptation in Bronze Age domesticated dogs
Cited by: 7
Author(s): Simone Rampelli, Silvia Turroni, Florencia Debandi, Antton Alberdi, Stephanie L. Schnorr, Courtney A. Hofman, Alberto Taddia, Riccardo Helg, Elena Biagi, Patrizia Brigidi, Federica D’Amico, Maurizio Cattani, Marco Candela
Software Mentions: 3
Published: about 3 years ago

10.3389/fonc.2021.710909

Development and Validation of a 18F-FDG PET-Based Radiomic Model for Evaluating Hypermetabolic Mediastinal–Hilar Lymph Nodes in Non-Small-Cell Lung Cancer
Cited by: 7
Author(s): Mingli Ouyang, Yiran Wang, Qingshan Deng, Yefei Zhu, Zhenhua Zhao, Ling Wang, Liangxing Wang, Kun Tang
Software Mentions: 3
Published: about 3 years ago

10.1038/s41598-017-08850-w

Ecological effects of full and partial protection in the crowded Mediterranean Sea: a regional meta-analysis
Cited by: 119
Author(s): Sylvaine Giakoumi, Claudia Scianna, Jeremiah Grahm Plass-Johnson, Fiorenza Micheli, Kirsten Grorud-Colvert, Pierre Thiriet, Joachim Claudet, G. Di Carlo, Antonio Franco, Steven D. Gaines, José Antonio García-Charton, Jane Lubchenco, Jeffrey J. Reimer, Enric Sala, Paolo Guidetti
Software Mentions: 3
Published: about 7 years ago

10.7717/peerj.5722

In search of an optimum sampling algorithm for prediction of soil properties from infrared spectra
Cited by: 30
Author(s): Wartini Ng, Budiman Minasny, Brendan Malone, Patrick Filippi
Software Mentions: 3
Published: almost 6 years ago

10.1155/2018/4350272

Geoffrey: An Automated Schedule System on a Social Robot for the Intellectually Challenged
Cited by: 8
Author(s): Edmanuel Cruz, Francisco Gomez-Donoso, Zuria Bauer, Miguel Cazorla, José García-Rodríguez, Ester Martínez-Martín, José Carlos Rangel, Francisco Gomez-Donoso
Software Mentions: 3
Published: almost 6 years ago

10.3389/fnagi.2018.00423

A Polygenic Risk Score Derived From Episodic Memory Weighted Genetic Variants Is Associated With Cognitive Decline in Preclinical Alzheimer’s Disease
Cited by: 15
Author(s): Tenielle Porter, Samantha Burnham, Greg Savage, Yen Ying Lim, Paul Maruff, Lidija Milicic, Madeline Peretti, David Ames, Colin L. Masters, Ralph N. Martins, Stephanie R. Rainey‐Smith, Christopher C. Rowe, Olivier Salvado, Kevin Taddei, David Groth, Giuseppe Verdile, Victor L. Villemagne, Simon M. Laws
Software Mentions: 3
Published: over 5 years ago

10.3389/fimmu.2020.01881

Single Nucleotide Polymorphism in KIR2DL1 Is Associated With HLA-C Expression in Global Populations
Cited by: 9
Author(s): Luciana de Brito Vargas, Renata Montoro Dourado, Leonardo Maldaner Amorim, Brenda Ho, Verónica Calonga‐Solís, Hellen Caroline Issler, Wesley M. Marin, Márcia Holsbach Beltrame, Maria Luiza Petzl‐Erler, Jill A. Hollenbach, Danillo G. Augusto
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0229936

PACC: Large scale connected component computation on Hadoop and Spark
Cited by: 6
Author(s): Ha-Myung Park, Namyong Park, Sung-Hyon Myaeng, U Kang
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0184204

Direct and indirect impact of 10-valent pneumococcal conjugate vaccine introduction on pneumonia hospitalizations and economic burden in all age-groups in Brazil: A time-series analysis
Cited by: 36
Author(s): Ana Lúcia Andrade, Eliane Terezinha Afonso, Ruth Minamisava, Ana Luiza Bierrenbach, Elier B. Cristo, Otaliba L. Morais-Neto, Gabriela Moreira Policena, Carla Magda Allan Santos Domingues, Cristiana M. Toscano
Software Mentions: 2
Published: about 7 years ago

10.2196/19992

Using Smartphones and Wearable Devices to Monitor Behavioral Changes During COVID-19
Cited by: 143
Author(s): Shaoxiong Sun, Amos Folarin, Yatharth Ranjan, Zulqarnain Rashid, Pauline Conde, Callum Stewart, Nicholas Cummins, Faith Matcham, Gloria Dalla Costa, Sara Simblett, Letizia Leocani, Femke Lamers, Per Soelberg Sørensen, Mathias Due Buron, Ana Zabalza, Ana Isabel Guerrero, Brenda W.J.H. Penninx, Sara Siddi, Josep María Haro, Inez Myin-Germeys, Aki Rintala, Til Wykes, Vaibhav A. Narayan, Gıancarlo Comı, Matthew Hotopf, Richard Dobson
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0212088

Microplastics in Mediterranean Sea: A protocol to robustly assess contamination characteristics
Cited by: 40
Author(s): Mikaël Kedzierski, Jonathan Villain, Mathilde Falcou-Préfol, Marie Emmanuelle Kerros, Maryvonne Henry, Maria Luiza Pedrotti, Stéphane Bruzaud
Software Mentions: 2
Published: over 5 years ago

10.3389/fonc.2021.650335

Determining Clinical Patient Selection Guidelines for Head and Neck Adaptive Radiation Therapy Using Random Forest Modelling and a Novel Simplification Heuristic
Cited by: 3
Author(s): Sarah Weppler, Harvey Quon, Colleen Schinkel, James Ddamba, Nabhya Harjai, Clarisse Vigal, Craig A. Beers, Lukas Van Dyke, Wendy Smith
Software Mentions: 2
Published: over 3 years ago

10.3389/fpls.2016.00641

Publishing FAIR Data: An Exemplar Methodology Utilizing PHI-Base
Cited by: 23
Author(s): Alejandro Rodríguez-Iglesias, Alejandro Rodríguez‐González, Alistair G. Irvine, Ane Sesma, Martin Urban, K. E. Hammond‐Kosack, Mark D. Wilkinson
Software Mentions: 2
Published: over 8 years ago

10.3390/v13081443

A Mortality-Based Description of EHDV and BTV Prevalence in Farmed White-Tailed Deer (Odocoileus virginianus) in Florida, USA
Cited by: 8
Author(s): Sydney L. Cottingham, Zoe S. White, Samantha M. Wisely, Juan M. Campos-Krauer
Software Mentions: 2
Published: about 3 years ago

10.1186/s40462-019-0185-1

Size-dependent tradeoffs in seasonal freshwater environments facilitate differential salmonid migration
Cited by: 7
Author(s): Philip Dermond, Carlos J. Melián, Jakob Brodersen
Software Mentions: 2
Published: almost 5 years ago

10.3390/ijms21103408

Implementing the CRISPR/Cas9 Technology in Eucalyptus Hairy Roots Using Wood-Related Genes
Cited by: 24
Author(s): Ying Dai, Guojian Hu, Annabelle Dupas, Luciano Medina, Nils Blandels, Hélène San Clemente, Nathalie Ladouce, Myriam Badawi, Guillermina Hernandez-Raquet, Fabien Mounet, Jacqueline Grima‐Pettenati, Hua Cassan-Wang
Software Mentions: 2
Published: over 4 years ago

10.1186/1546-0096-6-2

Motor performance and functional ability in preschool- and early school-aged children with Juvenile Idiopathic Arthritis: a cross-sectional study
Cited by: 24
Author(s): Janjaap van der Net, Patrick van der Torre, Raoul Engelbert, Vivian Engelen, Femke van Zon, Tim Takken, Paul J. M. Helders
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0250183

Restoration of gallery forest patches improves recruitment of motacú palms (Attalea princeps) while diversifying and increasing wildlife populations
Cited by: 1
Author(s): Jo Peacock, Christopher M. Tonra, Jonathan King, G. Matt Davies
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2013.00540

Reconstruction and analysis of nutrient-induced phosphorylation networks in Arabidopsis thaliana
Cited by: 19
Author(s): Guangyou Duan, Dirk Walther, Waltraud X. Schulze
Software Mentions: 1
Published: over 11 years ago

10.3389/fonc.2020.01698

Toxicoproteomics Disclose Pesticides as Downregulators of TNF-α, IL-1β and Estrogen Receptor Pathways in Breast Cancer Women Chronically Exposed
Cited by: 13
Author(s): Luciana Pizzatti, Aedra Carla Bufalo Kawassaki, Bruna Fadel, Fábio César Sousa Nogueira, Joseph A M Evaristo, Nicole Woldmar, Géssica Tuani Teixeira, Janaína Carla da Silva, Thalita Basso Scandolara, Daniel Rech, Luciano Pessôa Zanetti Candiotto, Guilherme Ferreira Silveira, Wander Rogério Pavanelli, Carolina Panis
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0215692

Energy, hierarchy and the origin of inequality
Cited by: 7
Author(s): Blair Fix
Software Mentions: 1
Published: over 5 years ago

10.3390/molecules25112600

Comparison of Phytochemicals, Antioxidant, and In Vitro Anti-Alzheimer Properties of Twenty-Seven Morus spp. Cultivated in Thailand
Cited by: 12
Author(s): Piya Temviriyanukul, Varittha Sritalahareuthai, Kriskamol Na Jom, Butsara Jongruaysup, Somying Tabtimsri, Kanchana Pruesapan, Sirinapa Thangsiri, Woorawee Inthachat, Dalad Siriwan, Somsri Charoenkiatkul, Uthaiwan Suttisansanee
Software Mentions: 1
Published: over 4 years ago

10.1186/1475-2875-13-44

The feasibility, patterns of use and acceptability of using mobile phone text-messaging to improve treatment adherence and post-treatment review of children with uncomplicated malaria in western Kenya
Cited by: 21
Author(s): G. Otieno, Sophie Githinji, Caroline Jones, Robert W. Snow, Ambrose Talisuna, Dejan Zurovac
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0105639

Gene Expression Profiling in Human Lung Development: An Abundant Resource for Lung Adenocarcinoma Prognosis
Cited by: 18
Author(s): Feng Li, Jiamei Wang, Bangrong Cao, Yi Zhang, Bo Wu, Di Xia, Wei Jiang, Ning An, Dongfang Lu, Suhong Gao, Yuda Zhao, Zhaoli Chen, Yousheng Mao, Yanning Gao, Dujin Zhou, Jin Jen, Xiaohong Liu, Yunping Zhang, Xia Li, Kaitai Zhang, Jie He, Shujun Cheng
Software Mentions: 1
Published: about 10 years ago

10.2196/11734

RADAR-Base: Open Source Mobile Health Platform for Collecting, Monitoring, and Analyzing Data Using Sensors, Wearables, and Mobile Devices
Cited by: 139
Author(s): Yatharth Ranjan, Zulqarnain Rashid, Callum Stewart, Pauline Conde, Mark Begale, Denny Verbeeck, Sebastian Boettcher, Hyve, Richard Dobson, Amos Folarin
Software Mentions: 1
Published: about 5 years ago

10.1186/s12888-021-03434-5

Investigating the impact of COVID-19 lockdown on adults with a recent history of recurrent major depressive disorder: a multi-Centre study using remote measurement technology
Cited by: 15
Author(s): Daniel Leightley, Grace Lavelle, Katie M White, Shaoxiong Sun, Faith Matcham, Alina Ivan, Carolin Oetzmann, Brenda W. J. H. Penninx, Femke Lamers, Sara Siddi, Josep M. Haro, Inez Myin-Germeys, Stuart Bruce, Raluca Nica, Alice Wickersham, Peter Annas, David C. Mohr, Sara Simblett, Til Wykes, Nicholas Cummins, Amos Folarin, Pauline Conde, Yatharth Ranjan, Richard Dobson, Viabhav A. Narayan, Matthew Hotopf
Software Mentions: 1
Published: about 3 years ago

10.1371/journal.pone.0158896

Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining
Cited by: 13
Author(s): Imane Boudellioua, Rabie Saidi, Robert Hoehndorf, Maria Jesus Martin, Victor Solovyev
Software Mentions: 1
Published: about 8 years ago

10.3390/ph12030132

Twenty Years of Ferroportin Disease: A Review or An Update of Published Clinical, Biochemical, Molecular, and Functional Features
Cited by: 32
Author(s): L. Tom Vlasveld, Roel Janssen, Édouard Bardou-Jacquet, Hanka Venselaar, Houda Hamdi-Rozé, Hal Drakesmith, Dorine W. Swinkels
Software Mentions: 1
Published: about 5 years ago

10.3389/frobt.2021.627730

Improving Autonomous Robotic Navigation Using Imitation Learning
Cited by: 4
Author(s): Brian Cèsar-Tondreau, Garrett Warnell, Ethan Stump, Kevin Kochersberger, Nicholas R. Waytowich
Software Mentions: 1
Published: over 3 years ago

10.1186/2193-1801-1-4

The age-phenome database
Cited by: 4
Author(s): Nophar Geifman, Eitan Rubin
Software Mentions: 1
Published: over 12 years ago