Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: qtl

https://packages.ecosyste.ms/registries/pypi.org/packages/qtl

Utilities for analyzing and visualizing QTL data
9 versions
Latest release: almost 4 years ago
1 dependent package
158 downloads last month

Papers Mentioning qtl 86

10.1534/g3.116.038190
Adapting Genotyping-by-Sequencing for Rice F2 Populations
Cited by: 65
Author(s): Tomohisa Furuta, Motoyuki Ashikari, Kshirod K. Jena, Kouki Doi, Stefan Reuscher
Software Mentions: 7
Published: almost 8 years ago
10.3389/fpls.2019.01581
Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]
Cited by: 24
Author(s): Tomás Carrasco-Valenzuela, Claudia Muñoz-Espinoza, Aníbal Riveros, Romina Pedreschi, Pere Arús, Reinaldo Campos-Vargas, Claudio Meneses
Software Mentions: 7
Published: about 5 years ago
10.1038/s41437-019-0251-x
Genetic and genomic analysis of the seed-filling process in maize based on a logistic model
Cited by: 14
Author(s): Yin Su, Pengcheng Li, Yongsheng Xu, Jun Li, Tiantian Yang, Jie Wei, Shaohang Xu, Junjie Yu, Huiying Fang, Li Xue, Dejun Hao, Zefeng Yang, Chenwu Xu
Software Mentions: 7
Published: over 5 years ago
10.1186/s13073-016-0334-8
Panx3 links body mass index and tumorigenesis in a genetically heterogeneous mouse model of carcinogen-induced cancer
Cited by: 12
Author(s): Kyle Halliwill, David A. Quigley, Hio Chung Kang, Reyno Del Rosario, David G. Ginzinger, Allan Balmain
Software Mentions: 7
Published: over 8 years ago
10.26508/lsa.201800146
A carnivorous plant genetic map: pitcher/insect-capture QTL on a genetic linkage map of<i>Sarracenia</i>
Cited by: 2
Author(s): Russell L. Malmberg, Willie L. Rogers, Magdy S. Alabady
Software Mentions: 6
Published: about 6 years ago
10.1534/g3.118.200965
Identification of Gene Variants Associated with Melanocyte Stem Cell Differentiation in Mice Predisposed for Hair Graying
Cited by: 3
Author(s): Allison Fialkowski, Denise J. Levy, Dawn E. Watkins‐Chow, Joseph W. Palmer, Roshan Darji, Hemant K. Tiwari, William J. Pavan, Melissa L. Harris
Software Mentions: 6
Published: almost 6 years ago
10.1186/s12870-019-1774-2
Effect of drought stress on the genetic architecture of photosynthate allocation and remobilization in pods of common bean (Phaseolus vulgaris L.), a key species for food security
Cited by: 35
Author(s): Jorge C. Berny Mier y Teran, Enéas Ricardo Konzen, Antonia Palkovic, Siu Mui Tsai, Idupulapati M. Rao, Stephen E. Beebe, Paul Gepts
Software Mentions: 6
Published: over 5 years ago
10.1093/gbe/evx269
A Genome Resequencing-Based Genetic Map Reveals the Recombination Landscape of an Outbred Parasitic Nematode in the Presence of Polyploidy and Polyandry
Cited by: 53
Author(s): Stephen R. Doyle, Roz Laing, David J. Bartley, Collette Britton, Umer Chaudhry, John S. Gilleard, Nancy Holroyd, Barbara K. Mable, Kirsty Maitland, Alison A. Morrison, Andy Tait, Alan S. Tracey, Matthew Berriman, Eileen Devaney, James A. Cotton, Neil Sargison
Software Mentions: 5
Published: about 7 years ago
10.1371/journal.pone.0227826
Identification of a major QTL and associated molecular marker for high arabinoxylan fibre in white wheat flour
Cited by: 16
Author(s): Alison Lovegrove, Luzie U. Wingen, A.M. Plummer, A. Wood, Diana Passmore, Ondřej Kosík, J. Freeman, Rachel Mitchell, Kirsty L. Hassall, Mehmet Ülker, Karolina Tremmel-Bede, Marianna Rakszegi, Z. Bedő, Marie-Reine Perretant, Gilles Charmet, Caroline Pont, Jérôme Salse, Michelle Leverington Waite, Simon Orford, Amanda Burridge, Till K. Pellny, Peter R. Shewry, Simon Griffiths
Software Mentions: 5
Published: almost 5 years ago
10.3389/fpls.2021.733899
Discovery of the REN11 Locus From Vitis aestivalis for Stable Resistance to Grapevine Powdery Mildew in a Family Segregating for Several Unstable and Tissue-Specific Quantitative Resistance Loci
Cited by: 22
Author(s): Avinash Karn, Cheng Zou, Siraprapa Brooks, Jonathan Fresnedo-Ramírez, F. Mlikota Gabler, Qi Sun, David W. Ramming, Rachel P. Naegele, Craig A. Ledbetter, Lance Cadle‐Davidson
Software Mentions: 5
Published: over 3 years ago
10.1186/s12859-015-0475-6
Pheno2Geno - High-throughput generation of genetic markers and maps from molecular phenotypes for crosses between inbred strains
Cited by: 9
Author(s): Konrad Zych, Yang Li, Joeri K. van der Velde, Ronny V.L. Joosen, Wilco Ligterink, Ritsert C. Jansen, Danny Arends
Software Mentions: 5
Published: almost 10 years ago
10.1534/genetics.116.194688
Wheat Landrace Genome Diversity
Cited by: 67
Author(s): Luzie U. Wingen, Claire West, Michelle Leverington-Waite, Sarah Collier, Simon Orford, Richard Goram, Caiyun Yang, Julie King, Alexandra M. Allen, Amanda Burridge, Keith J. Edwards, Simon Griffiths
Software Mentions: 5
Published: over 7 years ago
10.1007/s12011-019-01850-z
MCHM Acts as a Hydrotrope, Altering the Balance of Metals in Yeast
Cited by: 4
Author(s): Amaury Pupo, Michael C. Ayers, Zachary Sherman, Rachel J. Vance, Jonathan R. Cumming, Jennifer E. G. Gallagher
Software Mentions: 5
Published: over 5 years ago
10.1534/g3.117.300350
Mapping and Predicting Non-Linear<i>Brassica rapa</i>Growth Phenotypes Based on Bayesian and Frequentist Complex Trait Estimation
Cited by: 8
Author(s): Robert L. Baker, Wen Fung Leong, Stephen M. Welch, Cynthia Weinig
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pbio.0060083
Gene–Environment Interaction in Yeast Gene Expression
Cited by: 368
Author(s): Erin N. Smith, Leonid Kruglyak
Software Mentions: 4
Published: over 16 years ago
10.1371/journal.pgen.1000419
Recombinational Landscape and Population Genomics of Caenorhabditis elegans
Cited by: 380
Author(s): Matthew V. Rockman, Leonid Kruglyak
Software Mentions: 4
Published: almost 16 years ago
10.1038/s42003-020-01413-2
A haplotype-led approach to increase the precision of wheat breeding
Cited by: 62
Author(s): Jemima Brinton, Ricardo H. Ramírez-González, James Simmonds, Luzie U. Wingen, Simon Orford, Simon Griffiths, Wheat Genome, Georg Haberer, Manuel Spannagl, Sean Walkowiak, Curtis Pozniak, Cristóbal Uauy
Software Mentions: 4
Published: about 4 years ago
10.1038/s42003-021-02210-1
The power and promise of genetic mapping from Plasmodium falciparum crosses utilizing human liver-chimeric mice
Cited by: 10
Author(s): Katrina A. Button-Simons, Sudhir Kumar, Nelly Carmago, Haile, Catherine Jett, Lisa A. Checkley, Spencer Y. Kennedy, Richard S. Pinapati, Douglas A. Shoue, Marina McDew-White, X Li, François Nosten, Stefan H. I. Kappe, Jeanne Romero‐Severson, Ferdig, Scott J. Emrich, Ashley M. Vaughan, Ian H. Cheeseman
Software Mentions: 4
Published: over 3 years ago
10.1242/dmm.048090
Integrative genomic analysis of blood pressure and related phenotypes in rats
Cited by: 6
Author(s): Fumihiko Takeuchi, Yi-Qiang Liang, Motohide Isono, Masanori Tajima, Zong Hu Cui, Yoko Ikoma, Takanari Gotoda, Toru Nabika, Norihiro Kato
Software Mentions: 4
Published: over 3 years ago
10.1016/j.fochx.2020.100093
Genetic variation in wheat grain quality is associated with differences in the galactolipid content of flour and the gas bubble properties of dough liquor
Cited by: 8
Author(s): Byoung Koun Min, Louise J. Salt, Peter J. Wilde, Ondřej Kosík, Kirsty L. Hassall, Alexandra M. Przewieslik‐Allen, Amanda Burridge, Mervin Poole, J. W. Snape, Luzie U. Wingen, Richard P. Haslam, Simon Griffiths, Peter R. Shewry
Software Mentions: 4
Published: over 4 years ago
10.3389/fpls.2019.01346
Seed Coat Pattern QTL and Development in Cowpea (Vigna unguiculata [L.] Walp.)
Cited by: 30
Author(s): Ira A. Herniter, Ryan Lo, María Muñoz‐Amatriaín, Sassoum Lo, Yi‐Ning Guo, Bao‐Lam Huynh, Mitchell R. Lucas, Zhenyu Jia, Philip A. Roberts, Stefano Lonardi, Timothy J. Close
Software Mentions: 4
Published: about 5 years ago
10.1534/g3.115.023481
A Major Locus Controls a Genital Shape Difference Involved in Reproductive Isolation Between<i>Drosophila yakuba</i>and<i>Drosophila santomea</i>
Cited by: 28
Author(s): Alexandre E. Peluffo, Isabelle Nuez, Vincent Debat, Rosina Savisaar, David L. Stern, Virginie Orgogozo
Software Mentions: 4
Published: about 9 years ago
10.1534/g3.118.200521
Identification of Candidate Genes Controlling Black Seed Coat and Pod Tip Color in Cowpea (<i>Vigna unguiculata</i>[L.] Walp)
Cited by: 31
Author(s): Ira A. Herniter, María Muñoz‐Amatriaín, Sassoum Lo, Yi‐Ning Guo, Timothy J. Close
Software Mentions: 4
Published: about 6 years ago
10.1534/g3.120.401824
A Novel Mapping Strategy Utilizing Mouse Chromosome Substitution Strains Identifies Multiple Epistatic Interactions That Regulate Complex Traits
Cited by: 3
Author(s): Anna Miller, Anlu Chen, Jacquelaine Bartlett, Li Wang, Scott M. Williams, David A. Buchner
Software Mentions: 4
Published: about 4 years ago
10.1093/g3journal/jkaa061
Gene-level quantitative trait mapping in <i>Caenorhabditis elegans</i>
Cited by: 16
Author(s): Luke M. Noble, Matthew V. Rockman, Henrique Teotónio
Software Mentions: 4
Published: almost 4 years ago
10.7554/eLife.68203
Genetic variant in 3’ untranslated region of the mouse pycard gene regulates inflammasome activity
Cited by: 11
Author(s): Brian Ritchey, Qimin Hai, Juying Han, John Barnard, Jonathan Smith
Software Mentions: 4
Published: over 3 years ago
10.1186/1471-2164-11-502
Data-driven assessment of eQTL mapping methods
Cited by: 52
Author(s): Jacob J. Michaelson, Rudi Alberts, Klaus Schughart, Andreas Beyer
Software Mentions: 3
Published: over 14 years ago
10.1093/bioinformatics/btx576
LinkageMapView—rendering high-resolution linkage and QTL maps
Cited by: 127
Author(s): Lisa Ouellette, Robert W. Reid, Steven G. Blanchard, Cory Brouwer
Software Mentions: 3
Published: over 7 years ago
10.3389/fpls.2021.667910
Novel Salinity Tolerance Loci in Chickpea Identified in Glasshouse and Field Environments
Cited by: 19
Author(s): Judith Atieno, Timothy D. Colmer, Julian Taylor, Yongle Li, John Quealy, Lukasz Kotula, Dion Nicol, Duong Thuy Nguyen, Chris Brien, Peter Langridge, Janine Croser, J. F. Hayes, Tim Sutton
Software Mentions: 3
Published: over 3 years ago
10.1534/g3.114.012245
A Saturated Genetic Linkage Map of Autotetraploid Alfalfa (<i>Medicago sativa</i> L.) Developed Using Genotyping-by-Sequencing Is Highly Syntenous with the <i>Medicago truncatula</i> Genome
Cited by: 87
Author(s): Xuehui Li, Yanling Wei, Ananta Acharya, Qingzhen Jiang, Junmei Kang, E. Charles Brummer
Software Mentions: 3
Published: about 10 years ago
10.1007/s00122-016-2844-6
Genetic dissection of sorghum grain quality traits using diverse and segregating populations
Cited by: 54
Author(s): Richard Boyles, Brian K. Pfeiffer, Elizabeth A. Cooper, B. Rauh, Kelsey J. Zielinski, Matthew T. Myers, Zachary Brenton, William L. Rooney, Stephen Kresovich
Software Mentions: 3
Published: almost 8 years ago
10.5334/jors.at
Fourteen Years of R/qtl: Just Barely Sustainable
Cited by: 7
Author(s): Karl W. Broman
Software Mentions: 3
Published: over 10 years ago
10.1534/g3.115.017178
A Powerful New Quantitative Genetics Platform, Combining<i>Caenorhabditis elegans</i>High-Throughput Fitness Assays with a Large Collection of Recombinant Strains
Cited by: 99
Author(s): Erik C. Andersen, Tyler C. Shimko, Jonathan R. Crissman, Rajarshi Ghosh, Joshua S. Bloom, Hannah S. Seidel, Justin P. Gerke, Leonid Kruglyak
Software Mentions: 3
Published: over 9 years ago
10.1186/1471-2164-14-127
Genetic analysis of the Trichuris muris-induced model of colitis reveals QTL overlap and a novel gene cluster for establishing colonic inflammation
Cited by: 20
Author(s): Scott Levison, Paul Fisher, Jenny Hankinson, Leo Zeef, Steve Eyre, William Ollier, John McLaughlin, Andy Brass, Richard K. Grencis, Joanne L. Pennock
Software Mentions: 3
Published: almost 12 years ago
10.1371/journal.pgen.1008986
Natural variation in the sequestosome-related gene, sqst-5, underlies zinc homeostasis in Caenorhabditis elegans
Cited by: 23
Author(s): Kathryn Evans, Stefan Zdraljevic, Lewis Stevens, Kimberly D. Collins, Robyn E. Tanny, Erik C. Andersen
Software Mentions: 3
Published: about 4 years ago
10.1007/s11032-018-0789-y
Genetic analysis and QTL mapping of the seed hardness trait in a black common bean (Phaseolus vulgaris) recombinant inbred line (RIL) population
Cited by: 30
Author(s): K. S. Sandhu, Frank M. You, Robert L. Conner, P. Balasubramanian, Anfu Hou
Software Mentions: 3
Published: almost 7 years ago
10.7717/peerj.5461
Image-based phenotyping for identification of QTL determining fruit shape and size in American cranberry (<i>Vaccinium macrocarpon</i>L.)
Cited by: 28
Author(s): Luis Díaz-García, Giovanny Covarrubias‐Pazaran, Brandon Schlautman, Edward Grygleski, Juan Zalapa
Software Mentions: 3
Published: over 6 years ago
10.7717/peerj.6815
Characterization of introgression from the teosinte <i>Zea mays</i> ssp. <i>mexicana</i> to Mexican highland maize
Cited by: 21
Author(s): Eric González‐Segovia, Sergio Pérez-Limón, G. Carolina Cintora-Martinez, Alejandro Guerrero-Zavala, Garrett M. Janzen, Matthew B. Hufford, Jeffrey Ross‐Ibarra, Ruairidh J. H. Sawers
Software Mentions: 3
Published: over 5 years ago
10.3389/fpls.2018.00717
An Immortalized Genetic Mapping Population for Perennial Ryegrass: A Resource for Phenotyping and Complex Trait Mapping
Cited by: 4
Author(s): Janaki Velmurugan, Dan Milbourne, V. Connolly, J. Heslop‐Harrison, Ulrike C. M. Anhalt, M.B. Lynch, Susanne Barth
Software Mentions: 3
Published: over 6 years ago
10.1371/journal.pgen.1006656
Novel insights into SLC25A46-related pathologies in a genetic mouse model
Cited by: 32
Author(s): Maria Eirini Terzenidou, Aikaterini Segklia, Toshimi Kano, Florentia Papastefanaki, Alexandros Karakostas, Maria Charalambous, Fotis Ioakeimidis, Maria Papadaki, Ismini Kloukina, Margarita Chrysanthou‐Piterou, Martina Samiotaki, George Panayotou, Rebecca Matsas, Eleni Douni
Software Mentions: 3
Published: over 7 years ago
10.1371/journal.pone.0043888
Evolution of Multiple Additive Loci Caused Divergence between Drosophila yakuba and D. santomea in Wing Rowing during Male Courtship
Cited by: 32
Author(s): Jessica Cande, Peter Andolfatto, Benjamin Prud’homme, David L. Stern, Nicolas Gompel
Software Mentions: 3
Published: over 12 years ago
10.1371/journal.pgen.1005805
Weak Epistasis Generally Stabilizes Phenotypes in a Mouse Intercross
Cited by: 28
Author(s): Anna L. Tyler, Leah Rae Donahue, Gary A. Churchill, Gregory W. Carter
Software Mentions: 3
Published: almost 9 years ago
10.1534/g3.117.300169
A New Diagnostic Resource for<i>Ceratitis capitata</i>Strain Identification Based on QTL Mapping
Cited by: 8
Author(s): Sheina B. Sim, Raul Ruiz‐Arce, Norman B. Barr, Scott M. Geib
Software Mentions: 3
Published: about 7 years ago
10.1371/journal.pgen.1008337
A first genetic portrait of synaptonemal complex variation
Cited by: 18
Author(s): Richard J. Wang, Beth L. Dumont, Peicheng Jing, Bret A. Payseur
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pgen.1004142
Genetic Basis of Metabolome Variation in Yeast
Cited by: 50
Author(s): J. Scott Breunig, Sean R. Hackett, Joshua D. Rabinowitz, Leonid Kruglyak
Software Mentions: 3
Published: almost 11 years ago
10.1371/journal.pgen.1005250
Genetic Regulation of Bone Metabolism in the Chicken: Similarities and Differences to Mammalian Systems
Cited by: 41
Author(s): Martin Johnsson, Kenneth B. Jonsson, Leif C. Andersson, Per Jensen, I. A. Wright
Software Mentions: 3
Published: over 9 years ago
10.1534/g3.114.010389
Identification of Major and Minor QTL for Ecologically Important Morphological Traits in Three-Spined Sticklebacks (<i>Gasterosteus aculeatus</i>)
Cited by: 29
Author(s): Jun Li, Takahito Shikano, Tuomas Leinonen, José M. Cano, Menghua Li, Juha Merilä
Software Mentions: 2
Published: over 10 years ago
10.1534/g3.114.015073
The Genetics of Resistance to<i>Morinda</i>Fruit Toxin During the Postembryonic Stages in<i>Drosophila sechellia</i>
Cited by: 21
Author(s): Yan Huang, Deniz F. Erezyilmaz
Software Mentions: 2
Published: about 9 years ago
10.1038/s41598-020-57857-3
QTL mapping of modelled metabolic fluxes reveals gene variants impacting yeast central carbon metabolism
Cited by: 5
Author(s): Matthias Eder, Thibault Nidelet, Isabelle Sanchez, Carole Camarasa, Jean Luc Legras, Sylvie Dequin
Software Mentions: 2
Published: almost 5 years ago
10.1534/g3.116.033092
A Linkage Map and QTL Analysis for Pyrethroid Resistance in the Bed Bug <i>Cimex lectularius</i>
Cited by: 8
Author(s): Toby Fountain, Mark Ravinet, Richard Naylor, Klaus Reinhardt, Roger K. Butlin
Software Mentions: 2
Published: about 8 years ago
10.1534/g3.116.037721
Genetic and Targeted eQTL Mapping Reveals Strong Candidate Genes Modulating the Stress Response During Chicken Domestication
Cited by: 18
Author(s): Amir Fallahsharoudi, Neil de Kock, Martin Johnsson, Lejla Bektic, Sarojini J.K.A. Ubhayasekera, Jonas Bergquist, Dominic Wright, Per Jensen
Software Mentions: 2
Published: almost 8 years ago
10.1186/1471-2229-13-120
Plasticity of primary and secondary growth dynamics in Eucalyptushybrids: a quantitative genetics and QTL mapping perspective
Cited by: 25
Author(s): Jérôme Bartholome, Frédéric Salmon, Philippe Vigneron, Jean‐Marc Bouvet, Christophe Plomion, Jean‐Marc Gion
Software Mentions: 2
Published: over 11 years ago
10.1093/aob/mcaa140
A new genetic locus for self-compatibility in the outcrossing grass species perennial ryegrass (<i>Lolium perenne</i>)
Cited by: 6
Author(s): Lucy Marie Slatter, Susanne Barth, Chloé Manzanares, Janaki Velmurugan, I. C. M. Place, Daniel Thorogood
Software Mentions: 2
Published: over 4 years ago
10.1534/g3.117.300147
Fine Mapping of <i>QUICK ROOTING 1</i> and <i>2</i>, Quantitative Trait Loci Increasing Root Length in Rice
Cited by: 23
Author(s): Yuka Kitomi, Emari Nakao, Sawako Kawai, Noriko Kanno, Tsuyu Ando, Shuichi Fukuoka, Kenji Irie, Yusaku Uga
Software Mentions: 2
Published: almost 7 years ago
10.1038/s41598-021-81857-6
Interactions between two QTLs for time to anthesis on spike development and fertility in wheat
Cited by: 9
Author(s): Priyanka A. Basavaraddi, Roxana Savin, Luzie U. Wingen, Stefano Bencivenga, Alexandra M. Przewieslik‐Allen, Simon Griffiths, Gustavo A. Slafer
Software Mentions: 2
Published: almost 4 years ago
10.1534/g3.118.200642
vqtl: An R Package for Mean-Variance QTL Mapping
Cited by: 7
Author(s): Robert W. Corty, William Valdar
Software Mentions: 2
Published: about 6 years ago
10.1186/s12870-016-0784-6
A QTL on the short arm of wheat (Triticum aestivum L.) chromosome 3B affects the stability of grain weight in plants exposed to a brief heat shock early in grain filling
Cited by: 52
Author(s): Hamid Shirdelmoghanloo, Julian Taylor, Iman Lohraseb, Huwaida Rabie, Chris Brien, Andy Timmins, Peter Martin, D. E. Mather, Livinus Emebiri, Nicholas C. Collins
Software Mentions: 2
Published: over 8 years ago
10.1186/s12870-020-02790-w
Targeted amplicon sequencing + next-generation sequencing–based bulked segregant analysis identified genetic loci associated with preharvest sprouting tolerance in common buckwheat (Fagopyrum esculentum)
Cited by: 6
Author(s): Ryoma Takeshima, Eri Ogiso‐Tanaka, Yukihiko Yasui, Kenichi Matsui
Software Mentions: 2
Published: almost 4 years ago
10.1186/s40529-016-0130-1
Mapping quantitative trait loci for fruit traits and powdery mildew resistance in melon (Cucumis melo)
Cited by: 25
Author(s): Yuhua Wang, Dong-Hong Wu, Jin-Hsing Huang, Shing-Jy Tsao, Kae-Kang Hwu, Hsiao-Feng Lo
Software Mentions: 2
Published: over 8 years ago
10.1111/pbi.12729
Time-course expression QTL-atlas of the global transcriptional response of wheat to <i>Fusarium graminearum</i>
Cited by: 13
Author(s): Mina Samad-Zamini, Wolfgang Schweiger, Thomas Nußbaumer, Klaus Mayer, Hermann Buerstmayr
Software Mentions: 2
Published: over 7 years ago
10.1002/pld3.85
Sorghum stem aerenchyma formation is regulated by <i>SbNAC_D</i> during internode development
Cited by: 23
Author(s): Anna L. Casto, Brian McKinley, Ka Man Jasmine Yu, William L. Rooney, John E. Mullet
Software Mentions: 2
Published: about 6 years ago
10.1111/tpj.13716
A <scp>VIGS</scp> screen identifies immunity in the Arabidopsis Pla‐1 accession to viruses in two different genera of the Geminiviridae
Cited by: 9
Author(s): Maria Ines Reyes, Miguel A. Flores‐Vergara, Orlene Guerra‐Peraza, Cyprian Rajabu, Jigar Desai, Yokiko H. Hiromoto‐Ruiz, Joseph Ndunguru, Linda Hanley‐Bowdoin, Susanne Kjemtrup, José Trinidad Ascencio-Ibáñez, Dominique Robertson
Software Mentions: 2
Published: about 7 years ago
10.1186/s12864-019-6254-4
Construction of the first high-density genetic linkage map and identification of seed yield-related QTLs and candidate genes in Elymus sibiricus, an important forage grass in Qinghai-Tibet Plateau
Cited by: 9
Author(s): Zongyu Zhang, Wengang Xie, Junchao Zhang, Na Wang, Yingzhong Zhao, Yanrong Wang, Shiqie Bai
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pgen.0020130
Integrating Genetic and Network Analysis to Characterize Genes Related to Mouse Weight
Cited by: 390
Author(s): Anatole Ghazalpour, Sudheer Doss, Bin Zhang, Susanna Wang, Christopher L. Plaisier, Ruth Castellanos, Alec Brozell, Eric E. Schadt, Thomas A. Drake, Aldons J. Lusis, Steve Horvath
Software Mentions: 2
Published: over 18 years ago
10.1371/journal.pgen.1000034
Genetic Networks of Liver Metabolism Revealed by Integration of Metabolic and Transcriptional Profiling
Cited by: 189
Author(s): Christine T. Ferrara, Ping Wang, Elias Chaibub Neto, Robert Stevens, James R. Bain, Brett R. Wenner, Olga Ilkayeva, Mark P. Keller, Daniel A. Blasiole, Christina Kendziorski, Brian S. Yandell, Christopher B. Newgard, Alan D. Attie
Software Mentions: 2
Published: almost 17 years ago
10.1371/journal.pgen.1005146
The Orphan Gene dauerless Regulates Dauer Development and Intraspecific Competition in Nematodes by Copy Number Variation
Cited by: 46
Author(s): Melanie Mayer, Christian Rödelsperger, Hanh Witte, Metta Riebesell, Ralf J. Sommer
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pgen.1001057
Conserved Role of unc-79 in Ethanol Responses in Lightweight Mutant Mice
Cited by: 36
Author(s): David J. Speca, Daisuke Chihara, Amir M. Ashique, M. Scott Bowers, Jonathan T. Pierce-Shimomura, Jungsoo Lee, Nusrat Rabbee, Terence P. Speed, Rodrigo J. Gularte, James L. Chitwood, Juan F. Medrano, Mark Liao, James M. Sonner, Edmond I. Eger, Andrew S. Peterson, Steven L. McIntire
Software Mentions: 2
Published: over 14 years ago
10.1371/journal.pgen.1008467
Gpr63 is a modifier of microcephaly in Ttc21b mouse mutants
Cited by: 6
Author(s): John Snedeker, William J. Gibbons, David Paulding, Zakia Abdelhamed, Daniel R. Prows, Rolf W. Stottmann
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pgen.1000331
Mouse Genome-Wide Association Mapping Needs Linkage Analysis to Avoid False-Positive Loci
Cited by: 61
Author(s): Giacomo Manenti, Antonella Galvan, Angela Pettinicchio, Gaia Trincucci, Elena Spada, A. Zolin, Silvano Milani, Anna González-Neira, Tommaso A. Dragani
Software Mentions: 2
Published: almost 16 years ago
10.1371/journal.pone.0103233
The Genetic Basis of Variation in Clean Lineages of Saccharomyces cerevisiae in Response to Stresses Encountered during Bioethanol Fermentations
Cited by: 16
Author(s): Darren Greetham, Tithira T. Wimalasena, Kay Leung, Marcus E. Marvin, Yogeshwar Chandelia, A. Hart, Trevor G. Phister, Gregory A. Tucker, Edward J. Louis, Katherine A. Smart
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0104237
A Splicing Mutation in the Novel Mitochondrial Protein DNAJC11 Causes Motor Neuron Pathology Associated with Cristae Disorganization, and Lymphoid Abnormalities in Mice
Cited by: 43
Author(s): Fotis Ioakeimidis, Christine Ott, Vera Kozjak-Pavlovic, Foteini Violitzi, Vagelis Rinotas, Eleni Makrinou, Elias Eliopoulos, Costas Fasseas, George Kollias, Eleni Douni
Software Mentions: 2
Published: over 10 years ago
10.1371/journal.pone.0093759
Proteolysis at a Specific Extracellular Residue Implicates Integral Membrane CLAG3 in Malaria Parasite Nutrient Channels
Cited by: 35
Author(s): Wang Nguitragool, Kempaiah Rayavara, Sanjay A. Desai
Software Mentions: 2
Published: over 10 years ago
10.1186/s13068-018-1033-z
Quantitative trait loci for cell wall composition traits measured using near-infrared spectroscopy in the model C4 perennial grass Panicum hallii
Cited by: 8
Author(s): Elizabeth R. Milano, Christina M. Payne, Edward J. Wolfrum, John T. Lovell, Jerry Jenkins, Jeremy Schmutz, Thomas E. Juenger
Software Mentions: 2
Published: almost 7 years ago
10.1093/jxb/erw169
Dynamic QTLs for sugars and enzyme activities provide an overview of genetic control of sugar metabolism during peach fruit development
Cited by: 38
Author(s): Elsa Desnoues, Valentina Baldazzi, Michel Génard, Jehan-Baptiste Mauroux, Patrick Lambert, Carole Confolent, Bénédicte Quilot-Turion
Software Mentions: 2
Published: over 8 years ago
10.1371/journal.ppat.1004583
A Wild C. Elegans Strain Has Enhanced Epithelial Immunity to a Natural Microsporidian Parasite
Cited by: 75
Author(s): Keir M. Balla, Erik C. Andersen, Leonid Kruglyak, Emily R. Troemel
Software Mentions: 2
Published: almost 10 years ago
10.1038/srep29345
Construction of high-density genetic linkage map and identification of flowering-time QTLs in orchardgrass using SSRs and SLAF-seq
Cited by: 29
Author(s): Xinxin Zhao, Linkai Huang, Xinquan Zhang, Jianping Wang, Defei Yan, Ji Li, Lu Tang, Xiaolong Li, Tao Shi
Software Mentions: 2
Published: over 8 years ago
10.1038/s41598-017-04609-5
Sorghum Dw2 Encodes a Protein Kinase Regulator of Stem Internode Length
Cited by: 72
Author(s): Josie L. Hilley, Brock Weers, Sandra K. Truong, Ryan F. McCormick, Ashley J. Mattison, Brian McKinley, Daryl T. Morishige, John E. Mullet
Software Mentions: 2
Published: over 7 years ago
10.3389/fgene.2019.00124
Precise and Rapid Validation of Candidate Gene by Allele Specific Knockout With CRISPR/Cas9 in Wild Mice
Cited by: 11
Author(s): Tianzhu Chao, Zhuangzhuang Liu, Yu Zhang, Lichen Zhang, Rong Huang, Le He, Yanrong Gu, Zhijun Chen, Zheng Qin, Lei Shi, Wenping Zheng, Xinhui Qi, Eryan Kong, Zhongjian Zhang, Toby Lawrence, Yinming Liang, Liaoxun Lu
Software Mentions: 2
Published: almost 6 years ago
10.1038/s41598-018-23873-7
High-Density Genetic Map Construction and Identification of QTLs Controlling Oleic and Linoleic Acid in Peanut using SLAF-seq and SSRs
Cited by: 44
Author(s): Xiaojun Hu, S. Z. Zhang, Huarong Miao, Fenggao Cui, Yi Shen, Weiru Yang, Tingting Xu, N. Chen, X. Y., Z. M. Zhang, J. Chen
Software Mentions: 2
Published: over 6 years ago
10.3389/fpls.2016.01682
Arabidopsis Seed Content QTL Mapping Using High-Throughput Phenotyping: The Assets of Near Infrared Spectroscopy
Cited by: 16
Author(s): Sophie Jasinski, Alain Lécureuil, Monique Durandet, Patrick Bernard-Moulin, Philippe Guerche
Software Mentions: 2
Published: about 8 years ago
10.1186/1756-0500-4-154
qtl.outbred: Interfacing outbred line cross data with the R/qtl mapping software
Cited by: 8
Author(s): Ronald M. Nelson, Xia Shen, Örjan Carlborg
Software Mentions: 2
Published: over 13 years ago
10.1534/g3.111.000331
A QTL Study for Regions Contributing to<i>Arabidopsis thaliana</i>Root Skewing on Tilted Surfaces
Cited by: 31
Author(s): Laura Vaughn, Patrick Masson
Software Mentions: 2
Published: over 13 years ago
10.1534/g3.112.002253
Mapping Six New Susceptibility to Colon Cancer (<i>Scc</i>) Loci Using a Mouse Interspecific Backcross
Cited by: 4
Author(s): Chevonne D. Eversley, Yi Xie, R. Scott Pearsall, David W. Threadgill
Software Mentions: 2
Published: about 12 years ago
10.1534/g3.112.003806
Mapping Quantitative Trait Loci Affecting<i>Arabidopsis thaliana</i>Seed Morphology Features Extracted Computationally From Images
Cited by: 34
Author(s): Colleen F. Moore, David S. Gronwall, Nathan D. Miller, Edgar P. Spalding
Software Mentions: 2
Published: almost 12 years ago
10.1534/g3.113.008649
Multigenic Natural Variation Underlies<i>Caenorhabditis elegans</i>Olfactory Preference for the Bacterial Pathogen<i>Serratia marcescens</i>
Cited by: 60
Author(s): Elizabeth E Glater, Matthew V. Rockman, Cornelia I. Bargmann
Software Mentions: 2
Published: almost 11 years ago