Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
cran: Bchron
Radiocarbon Dating, Age-Depth Modelling, Relative Sea Level Rate Estimation, and Non-Parametric Phase ModellingPapers that mentioned: 12
bioconductor: OLIN
Optimized local intensity-dependent normalisation of two-color microarraysPapers that mentioned: 12
bioconductor: mzR
parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)Papers that mentioned: 12
bioconductor: miRNAtap
miRNAtap: microRNA Targets - Aggregated PredictionsPapers that mentioned: 12
cran: RClone
Papers that mentioned: 12pypi: ROA
A simple function to compute the running optimal average and effective no. of parameters.Papers that mentioned: 12
cran: TAR
Bayesian Modeling of Autoregressive Threshold Time Series ModelsPapers that mentioned: 12
bioconductor: ensembldb
Utilities to create and use Ensembl-based annotation databasesPapers that mentioned: 12
cran: scaffolder
Scaffolding Interfaces to Packages in Other Programming LanguagesPapers that mentioned: 12
bioconductor: EnrichmentBrowser
Seamless navigation through combined results of set-based and network-based enrichment analysisPapers that mentioned: 12
cran: ModelGood
Papers that mentioned: 12pypi: online
Papers that mentioned: 12pypi: regression
Recreation of different kinds of regression using optimisation algorithmsPapers that mentioned: 12
cran: InfiniumPurify
Estimate and Account for Tumor Purity in Cancer Methylation Data AnalysisPapers that mentioned: 12
cran: CARBayes
Spatial Generalised Linear Mixed Models for Areal Unit DataPapers that mentioned: 12
pypi: xlrd
Library for developers to extract data from Microsoft Excel (tm) .xls spreadsheet filesPapers that mentioned: 12
pypi: SimpleElastix
User-friendly multi-lingual library for medical image registrationPapers that mentioned: 12
pypi: mantel
Python implementation of the Mantel test, a significance test of the correlation between two distance matricesPapers that mentioned: 12
cran: rMVP
Memory-Efficient, Visualize-Enhanced, Parallel-Accelerated GWAS ToolPapers that mentioned: 12
cran: RNetLogo
Provides an Interface to the Agent-Based Modelling Platform 'NetLogo'Papers that mentioned: 12
pypi: langdetect
Language detection library ported from Google's language-detection.Papers that mentioned: 12
cran: asremlPlus
Augments 'ASReml-R' in Fitting Mixed Models and Packages Generally in Exploring Prediction DifferencesPapers that mentioned: 12
pypi: spm
SubProcess Manager provides a simple programming interface to safely run, pipe and redirect output of subprocesses.Papers that mentioned: 12
pypi: ab
A/B Testing Framework for Python with optional Multi-armed bandit implementationPapers that mentioned: 12
pypi: sybil
Automated testing for the examples in your code and documentation.Papers that mentioned: 12
cran: cutpointr
Determine and Evaluate Optimal Cutpoints in Binary Classification TasksPapers that mentioned: 11
bioconductor: tximeta
Transcript Quantification Import with Automatic MetadataPapers that mentioned: 11
cran: arsenal
An Arsenal of 'R' Functions for Large-Scale Statistical SummariesPapers that mentioned: 11
bioconductor: TDARACNE
Papers that mentioned: 11cran: glmpath
L1 Regularization Path for Generalized Linear Models and Cox Proportional Hazards ModelPapers that mentioned: 11
bioconductor: compcodeR
RNAseq data simulation, differential expression analysis and performance comparison of differential expression methodsPapers that mentioned: 11
pypi: Accord
A high-level Python Web framework that encourages rapid development and clean, pragmatic design.Papers that mentioned: 11
bioconductor: methylGSA
Gene Set Analysis Using the Outcome of Differential MethylationPapers that mentioned: 11
cran: glmmLasso
Variable Selection for Generalized Linear Mixed Models by L1-Penalized EstimationPapers that mentioned: 11
bioconductor: methylSig
MethylSig: Differential Methylation Testing for WGBS and RRBS DataPapers that mentioned: 11