Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Aggrescan3D
https://packages.ecosyste.ms/registries/pypi.org/packages/Aggrescan3D
Aggrescan3D - protein aggregation analysis standalone application
3 versions
Latest release: over 5 years ago
57 downloads last month
Papers Mentioning Aggrescan3D 12
10.3390/ijms20030606
Modeling of Disordered Protein Structures Using Monte Carlo Simulations and Knowledge-Based Statistical Force FieldsCited by: 41
Author(s): Maciej Pawel Ciemny, Aleksandra E. Badaczewska-Dawid, Monika Pikuzinska, Andrzej Koliński, Sebastian Kmiecik
Software Mentions: 4
Published: over 5 years ago
10.1093/bioinformatics/btaa578
Solubility-Weighted Index: fast and accurate prediction of protein solubilityCited by: 33
Author(s): Bikash K. Bhandari, Paul P. Gardner, Chun Shen Lim
Software Mentions: 3
Published: almost 4 years ago
10.1038/s41598-018-31289-6
Role of solvent accessibility for aggregation-prone patches in protein foldingCited by: 6
Author(s): Avinash Mishra, Shoba Ranganathan, B. Jayaram, Abdul Sattar
Software Mentions: 3
Published: almost 6 years ago
10.1038/s41598-018-35383-7
Vasoinhibin comprises a three-helix bundle and its antiangiogenic domain is located within the first 79 residuesCited by: 13
Author(s): Juan Pablo Robles, Magdalena Zamora, José Luis Velasco-Bolom, Miriam Tovar, Ramón Garduño‐Juárez, Thomas Bertsch, Gonzalo Martı́nez de la Escalera, Jakob Triebel, Carmen Clapp
Software Mentions: 3
Published: over 5 years ago
10.3390/md18110579
Endolysins from Antarctic Pseudomonas Display Lysozyme Activity at Low TemperatureCited by: 8
Author(s): Marco Orlando, Sandra Pucciarelli, Marina Lotti
Software Mentions: 2
Published: over 3 years ago
10.1038/s41598-020-80746-8
Generation and functional characterization of a single-chain variable fragment (scFv) of the anti-FGF2 3F12E7 monoclonal antibodyCited by: 16
Author(s): Rodrigo Barbosa de Aguiar, Tábata de Almeida da Silva, Bruno Andrade Costa, Marcelo Ferreira Marcondes Machado, Renata Yoshiko Yamada, Camila Braggion, Kátia Regina Perez, Marcelo Alves Silva Mori, Vitor Oliveira, Jane Zveiter de Moraes
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pgen.1005824
Specific Hsp100 Chaperones Determine the Fate of the First Enzyme of the Plastidial Isoprenoid Pathway for Either Refolding or Degradation by the Stromal Clp Protease in ArabidopsisCited by: 94
Author(s): Pablo Pulido, Ernesto Llamas, Briardo Llorente, Salvador Ventura, Louwrance P. Wright, Manuel Rodrı́guez-Concepción
Software Mentions: 2
Published: over 8 years ago
10.3389/fimmu.2017.01860
Engineering of Fc Fragments with Optimized Physicochemical Properties Implying Improvement of Clinical Potentials for Fc-Based TherapeuticsCited by: 51
Author(s): Chunpeng Yang, Xinyu Gao, Rui Gong
Software Mentions: 2
Published: over 6 years ago
10.1016/j.sbi.2020.01.005
Using protein engineering to understand and modulate aggregationCited by: 27
Author(s): Jessica S. Ebo, Nicolas Guthertz, Sheena E. Radford, David J. Brockwell
Software Mentions: 1
Published: over 4 years ago
10.3390/ijms20153774
Recent Advances in Coarse-Grained Models for Biomolecules and Their ApplicationsCited by: 67
Author(s): Nidhi Singh, Wenjin Li
Software Mentions: 1
Published: almost 5 years ago
10.3390/ijms17040552
Insights into the Antimicrobial Mechanism of Action of Human RNase6: Structural Determinants for Bacterial Cell Agglutination and Membrane PermeationCited by: 32
Author(s): David Pulido, Javier Arranz‐Trullén, Guillem Prats-Ejarque, Diego Velázquez, M. C. Torrent, Mohammed Moussaoui, Ester Boix
Software Mentions: 1
Published: about 8 years ago
10.3390/ijms18102076
Topical Ocular Delivery of TGF-β1 to the Back of the Eye: Implications in Age-Related Neurodegenerative DiseasesCited by: 32
Author(s): Chiara Bianca Maria Platania, Vincenzo Fisichella, Annamaria Fidilio, Filippo Geraci, Francesca Lazzara, Gian Marco Leggio, Salvatore Salomone, Filippo Drago, Rosario Pignatello, Filippo Caraci, Claudio Bucolo
Software Mentions: 1
Published: over 6 years ago