Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: SimpleElastix
https://packages.ecosyste.ms/registries/pypi.org/packages/SimpleElastix
User-friendly multi-lingual library for medical image registration
3 versions
Latest release: about 1 year ago
6 downloads last month
Papers Mentioning SimpleElastix 12
10.7554/eLife.61408
Constructing and optimizing 3D atlases from 2D data with application to the developing mouse brainCited by: 13
Author(s): David M. Young, Siavash Fazel Darbandi, Grace B. Schwartz, Zachary Bonzell, Deniz Yuruk, Mai Nojima, Leena Gole, John L.R. Rubenstein, Weimiao Yu, Stephan Sanders
Software Mentions: 7
Published: almost 4 years ago
10.1038/s41598-020-77740-5
Assessment of metastatic lymph nodes in head and neck squamous cell carcinomas using simultaneous 18F-FDG-PET and MRICited by: 14
Author(s): Jenny Chen, Mari Hagiwara, Babak Givi, Brian L. Schmidt, Cheng Z. Liu, Qi Chen, Jean Logan, Artem Mikheev, Henry Rusinek, Sungheon Kim
Software Mentions: 3
Published: almost 4 years ago
10.3389/fnins.2019.01055
Visualization and Quantification of Post-stroke Neural Connectivity and Neuroinflammation Using Serial Two-Photon Tomography in the Whole Mouse BrainCited by: 20
Author(s): Katherine Poinsatte, Dene Betz, Vanessa Torres, Apoorva D. Ajay, Shazia Mirza, Uma Maheswari Selvaraj, Erik J. Plautz, Xiangmei Kong, Sankalp Gokhale, Julian P. Meeks, Denise M.O. Ramirez, Mark P. Goldberg, Ann M. Stowe
Software Mentions: 2
Published: about 5 years ago
10.1038/s41598-018-25916-5
Motion compensated micro-CT reconstruction for in-situ analysis of dynamic processesCited by: 25
Author(s): Thomas De Schryver, Manuel Dierick, Marjolein Heyndrickx, Jeroen Van Stappen, Matthieu N. Boone, Luc Van Hoorebeke
Software Mentions: 2
Published: over 6 years ago
10.1038/s42003-021-02669-y
Subdiffraction-resolution fluorescence imaging of immunological synapse formation between NK cells and A. fumigatus by expansion microscopyCited by: 7
Author(s): Nora Trinks, Sebastian Reinhard, Matthias Drobny, Linda Heilig, Jürgen Löffler, Markus Sauer, Ulrich Terpitz
Software Mentions: 2
Published: about 3 years ago
10.1371/journal.pone.0253804
Impact of axisymmetric deformation on MR elastography of a nonlinear tissue-mimicking material and implications in peri-tumour stiffness quantificationCited by: 1
Author(s): Marco Fiorito, Daniel Fovargue, Adela Capilnasiu, Myrianthi Hadjicharalambous, David Nordsletten, Ralph Sinkus, John Lee
Software Mentions: 2
Published: over 3 years ago
10.3390/jimaging5030039
Image Registration with Particles, Examplified with the Complex Plasma Laboratory PK-4 on Board the International Space StationCited by: 4
Author(s): Mierk Schwabe, M. Rubin-Zuzic, Christoph Räth, Mikhail Pustylnik
Software Mentions: 2
Published: over 5 years ago
10.1038/s41598-018-28496-6
Integrated Brain Atlas for Unbiased Mapping of Nervous System Effects Following Liraglutide TreatmentCited by: 55
Author(s): Casper Bo Gravesen Salinas, Tess Tsai Hsiu Lu, Sanaz Gabery, Kasper Marstal, Tomas Alanentalo, Aaron J. Mercer, Anda Cornea, Knut Conradsen, Jacob Hecksher‐Sørensen, Anders Bjorholm Dahl, Lotte Bjerre Knudsen, Anna Secher
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-020-75525-4
Cardiac motion estimation from medical images: a regularisation framework applied on pairwise image registration displacement fieldsCited by: 15
Author(s): Hadi Wiputra, Weng Kong Chan, Yoke Yin Foo, Sheldon Ho, Choon Hwai Yap
Software Mentions: 1
Published: about 4 years ago
10.3389/fonc.2020.00596
Topographical Mapping of 436 Newly Diagnosed IDH Wildtype Glioblastoma With vs. Without MGMT Promoter MethylationCited by: 9
Author(s): Fatih Incekara, Sebastian R. van der Voort, Hendrikus J. Dubbink, Peggy N. Atmodimedjo, Rishi Nandoe Tewarie, Geert J. Lycklama, Arnaud Vincent, Johan M. Kros, Stefan Klein, Martin van den Bent, Marion Smits
Software Mentions: 1
Published: over 4 years ago
10.1186/s13244-020-00927-x
Diffusion tensor-based fiber tracking of the male urethral sphincter complex in patients undergoing radical prostatectomy: a feasibility studyCited by: 0
Author(s): Ana S. C. Verde, João Santinha, Eunice Carrasquinha, Nuno Loução, Ana Mascarenhas Gaivão, Jorge Fonseca, Celso Matos, Nikolaos Papanikolaou
Software Mentions: 1
Published: almost 4 years ago
10.3389/fnins.2020.609468
Investigation of Deep-Learning-Driven Identification of Multiple Sclerosis Patients Based on Susceptibility-Weighted Images Using Relevance AnalysisCited by: 20
Author(s): А. Л. Лопатина, Stefan Ropele, Renat Sibgatulin, Jürgen R. Reichenbach, Daniel Güllmar
Software Mentions: 1
Published: almost 4 years ago