Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: detectRUNS

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/detectRUNS

Detect Runs of Homozygosity and Runs of Heterozygosity in Diploid Genomes
2 versions
Latest release: about 5 years ago
317 downloads last month

Papers Mentioning detectRUNS 11

10.1038/s41598-021-88501-3

Genome-wide insights on gastrointestinal nematode resistance in autochthonous Tunisian sheep
Cited by: 17
Author(s): Abulgasim Ahbara, Mariem Rouatbi, Mohamed Gharbi, Mourad Rekik, Aynalem Haile, Barbara Rischkowsky, Joram M. Mwacharo
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0232436

Keep Garfagnina alive. An integrated study on patterns of homozygosity, genomic inbreeding, admixture and breed traceability of the Italian Garfagnina goat breed
Cited by: 9
Author(s): Christos Dadousis, Francesca Cecchi, Michela Ablondi, Maria Chiara Fabbri, Alessandra Stella, Rıccardo Bozzi
Software Mentions: 4
Published: almost 4 years ago

10.1093/g3journal/jkab085

A high-quality, chromosome-level genome assembly of the Black Soldier Fly (<i>Hermetia illucens</i> L.)
Cited by: 29
Author(s): Tomas N Generalovic, Shane McCarthy, Ian A. Warren, Jonathan Wood, James Torrance, Ying Sims, Michael A. Quail, Kerstin Howe, Miha Pipan, Richard Durbin, Chris D. Jiggins
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-021-82625-2

Genomic scans for selective sweeps through haplotype homozygosity and allelic fixation in 14 indigenous sheep breeds from Middle East and South Asia
Cited by: 14
Author(s): Sirous Eydivandi, Mahmoud Amiri Roudbar, Mohammad Osman Karimi, Goutam Sahana
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-020-65565-1

Uncovering Sub-Structure and Genomic Profiles in Across-Countries Subpopulations of Angus Cattle
Cited by: 4
Author(s): Diércles Francisco Cardoso, Gerardo Alves Fernandes Júnior, Daiane Cristina Becker Scalez, Anderson Luís Alves, Ana Fabrícia Braga Magalhães, Tiago Bresolin, Ricardo Vieira Ventura, Changxi Li, M. C. de S. Oliveira, Laércio R. Porto-Neto, Roberto Carvalheiro, Henrique Nunes de Oliveira, Humberto Tonhati, Lúcia Galvão de Albuquerque
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2020.00092

Genome-Wide Runs of Homozygosity Revealed Selection Signatures in Bos indicus
Cited by: 37
Author(s): S. P. Dixit, Sanjeev Singh, Indrajit Ganguly, A. K. Bhatia, Anjani Kumar Sharma, Narendra Kumar, Ajay Kumar Dang, S. Jayakumar
Software Mentions: 2
Published: almost 5 years ago

10.3390/genes10110938

Genome-Wide Runs of Homozygosity, Effective Population Size, and Detection of Positive Selection Signatures in Six Chinese Goat Breeds
Cited by: 35
Author(s): Rabiul Islam, Yefang Li, Xuexue Liu, Haile Berihulay, Adam Abied, Gebremedhin Gebreselassie, Qing Ma, Yue Ma
Software Mentions: 2
Published: about 5 years ago

10.3389/fgene.2021.659507

Genome Divergence and Dynamics in the Thin-Tailed Desert Sheep From Sudan
Cited by: 4
Author(s): Adam Abied, Abulgasim Ahbara, Haile Berihulay, Lingyang Xu, Rabiul Islam, Faisal M. El-Hag, Mourad Rekik, Aynalem Haile, Jianlin Han, Yue Ma, Qianjun Zhao, Joram M. Mwacharo
Software Mentions: 2
Published: over 3 years ago