Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: nucleotide

https://packages.ecosyste.ms/registries/pypi.org/packages/nucleotide

An Scons library which wraps interface of various compilers in to one universal.
5 versions
Latest release: over 4 years ago
21 downloads last month

Papers Mentioning nucleotide 12

10.1371/journal.pone.0239381
Short k-mer abundance profiles yield robust machine learning features and accurate classifiers for RNA viruses
Cited by: 8
Author(s): Nafis Ul Alam, Umar Faruq Chowdhury
Software Mentions: 7
Published: about 4 years ago
10.1002/ece3.4724
Highly flexible infection programs in a specialized wheat pathogen
Cited by: 72
Author(s): Janine Haueisen, Mareike Möller, Christoph Eschenbrenner, Jonathan Grandaubert, Heike Seybold, Holger Adamiak, Eva H. Stukenbrock
Software Mentions: 6
Published: almost 6 years ago
10.1038/s42003-020-01290-9
Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism
Cited by: 10
Author(s): Chrispin Chaguza, Marie Yang, Jennifer Cornick, Mignon du Plessis, Rebecca A. Gladstone, Brenda Kwambana-Adams, Stephanie Lo, Chinelo Ebruke, Gerry Tonkin‐Hill, Chikondi Peno, Madikay Senghore, Stephen K. Obaro, Sani Ousmane, Gerd Pluschke, Jean Marc Collard, Betuel Sigaúque, Neil French, Keith P. Klugman, Robert S. Heyderman, Lesley McGee, Martín Antonio, Robert F. Breiman, Anne von Gottberg, Dean Everett, Aras Kadioglu, Stephen D. Bentley
Software Mentions: 5
Published: about 4 years ago
10.1186/1745-6150-2-34
Systematic analysis of mRNA 5' coding sequence incompleteness in Danio rerio: an automated EST-based approach
Cited by: 5
Author(s): Flavia Frabetti, Raffaella Casadei, Luca Lenzi, Silvia Canaider, Lorenza Vitale, Federica Facchin, Paolo Carinci, Maria Zannotti, Pierluigi Strippoli
Software Mentions: 3
Published: almost 17 years ago
10.1038/s41598-017-13228-z
Large-scale genomic analyses reveal the population structure and evolutionary trends of Streptococcus agalactiae strains in Brazilian fish farms
Cited by: 24
Author(s): Gustavo Morais Barony, Guilherme Campos Tavares, Felipe Luiz Pereira, Alex F. Carvalho, Fernanda Alves Dorella, Carlos Augusto Gomes Leal, Henrique César Pereira Figueiredo
Software Mentions: 2
Published: about 7 years ago
10.1186/1471-2229-12-177
Divergent patterns of endogenous small RNA populations from seed and vegetative tissues of Glycine max
Cited by: 34
Author(s): Gracia Zabala, Edhilvia J. Campos, Kranthi Varala, Sean Bloomfield, Sarah I. Jones, Hlaing Win, Jigyasa H. Tuteja, Bernarda Calla, Steven J. Clough, Matthew E. Hudson, Lila O. Vodkin
Software Mentions: 2
Published: about 12 years ago
10.3390/v13050928
Phage Biocontrol of Pseudomonas aeruginosa in Water
Cited by: 10
Author(s): Ari Kauppinen, Sallamaari Siponen, Tarja Pitkänen, Karin Holmfeldt, Anna Pursiainen, Eila Torvinen, Ilkka T. Miettinen
Software Mentions: 2
Published: over 3 years ago
10.3390/genes9020035
Genome-Wide Characterization of Heat-Shock Protein 70s from Chenopodium quinoa and Expression Analyses of Cqhsp70s in Response to Drought Stress
Cited by: 31
Author(s): Jianxia Liu, Runmei Wang, Wenying Liu, Hongli Zhang, Yi Guo, Rong Wen
Software Mentions: 2
Published: almost 7 years ago
10.2807/1560-7917.ES.2018.23.33.1700798
Retrospective validation of whole genome sequencing-enhanced surveillance of listeriosis in Europe, 2010 to 2015
Cited by: 51
Author(s): Ivo Van Walle, Jonas T. Björkman, Martin Cormican, Timothy J. Dallman, Joël Mossong, Alexandra Moura, Ariane Pietzka, Werner Ruppitsch, Johanna Takkinen
Software Mentions: 1
Published: over 6 years ago
10.1186/1471-2407-7-66
Sequence, "subtle" alternative splicing and expression of the CYYR1 (cysteine/tyrosine-rich 1) mRNA in human neuroendocrine tumors
Cited by: 15
Author(s): Lorenza Vitale, Flavia Frabetti, Shane Huntsman, Silvia Canaider, Raffaella Casadei, Luca Lenzi, Federica Facchin, Paolo Carinci, Maria Zannotti, Domenico Coppola, Pierluigi Strippoli
Software Mentions: 1
Published: over 17 years ago
10.1038/srep39673
Evidence for a missing source of efficient ice nuclei
Cited by: 28
Author(s): Rui Du, Pengrui Du, Zhongwen Lü, Weishan Ren, Zongmin Liang, Saisai Qin, Ziming Li, Yaling Wang, Pingqing Fu
Software Mentions: 1
Published: almost 8 years ago
10.1093/cid/ciz404
Early Signals of Vaccine-driven Perturbation Seen in Pneumococcal Carriage Population Genomic Data
Cited by: 8
Author(s): Chrispin Chaguza, Ellen Heinsbroek, Rebecca A. Gladstone, Terence Tafatatha, Maaike Alaerts, Chikondi Peno, Jennifer Cornick, Patrick Musicha, Naor Bar-Zeev, Arox W Kamng’ona, Aras Kadioglu, Lesley McGee, William P. Hanage, Robert F. Breiman, Robert S. Heyderman, Neil French, Dean Everett, Stephen D. Bentley
Software Mentions: 1
Published: over 5 years ago