Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: parser

https://packages.ecosyste.ms/registries/pypi.org/packages/parser

General use parser library
1 version
Latest release: about 1 year ago

Papers Mentioning parser 12

10.3390/biom10060878

High-Throughput Identification of Adapters in Single-Read Sequencing Data
Cited by: 3
Author(s): Asan M. S. H. Mohideen, Steinar Johansen, Igor Babiak
Software Mentions: 8
Published: over 4 years ago

The draft genome of a wild barley genotype reveals its enrichment in genes related to biotic and abiotic stresses compared to cultivated barley
Cited by: 39
Author(s): Miao Liu, Yan Li, Yanling Ma, Qiang Zhao, Jiri Stiller, Qi Feng, Qifeng Tian, Dengcai Liu, Bin Han, Chunji Liu
Software Mentions: 6
Published: about 5 years ago

10.1186/s12859-017-1663-3

“gnparser”: a powerful parser for scientific names based on Parsing Expression Grammar
Cited by: 10
Author(s): Dmitry Mozzherin, Alexander A. Myltsev, David J. Patterson
Software Mentions: 4
Published: over 7 years ago

10.1093/molbev/msaa315

HAPHPIPE: Haplotype Reconstruction and Phylodynamics for Deep Sequencing of Intrahost Viral Populations
Cited by: 9
Author(s): Matthew L. Bendall, Keylie M. Gibson, Margaret C. Steiner, Uzma Rentia, Marcos Pérez‐Losada, Keith A. Crandall
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2018.00251

Recovering Genomics Clusters of Secondary Metabolites from Lakes Using Genome-Resolved Metagenomics
Cited by: 27
Author(s): Rafael R. C. Cuadrat, Danny Ionescu, Alberto M. R. Dávila, Hans‐Peter Grossart
Software Mentions: 4
Published: over 6 years ago

10.3389/fgene.2021.639160

Exploring Common Therapeutic Targets for Neurodegenerative Disorders Using Transcriptome Study
Cited by: 10
Author(s): S. Akila Parvathy Dharshini, Sherlyn Jemimah, Y-h. Taguchi, M. Michael Gromiha
Software Mentions: 3
Published: over 3 years ago

10.1186/s40064-016-2809-x

SentiHealth: creating health-related sentiment lexicon using hybrid approach
Cited by: 46
Author(s): Muhammad Zubair Asghar, Shakeel Ahmad, Maria Qasim, Syeda Rabail Zahra, Fazal Masud Kundi
Software Mentions: 2
Published: about 8 years ago

10.1186/1752-0509-6-67

PathCase-SB: integrating data sources and providing tools for systems biology research
Cited by: 5
Author(s): Sarp A Coskun, Xin Qi, Ali Çakmak, En Cheng, A. Ercüment Çiçek, Lei Yang, Rishiraj Jadeja, Ranjan K. Dash, Nicola Lai, Gültekin Özsoyoǧlu, Z. Meral Özsoyoǧlu
Software Mentions: 2
Published: over 12 years ago

10.1111/pbi.13230

Extreme resistance to Potato virus Y in potato carrying the Rysto gene is mediated by a <scp>TIR</scp>‐<scp>NLR</scp> immune receptor
Cited by: 46
Author(s): Marta Grech‐Baran, Kamil Witek, Katarzyna Szajko, Agnieszka Witek, Karolina Morgiewicz, Iwona Wasilewicz‐Flis, H. Jakuczun, Waldemar Marczewski, Jonathan D. G. Jones, Jacek Hennig
Software Mentions: 1
Published: about 5 years ago

10.1186/gb-2007-8-5-r75

cis-Decoder discovers constellations of conserved DNA sequences shared among tissue-specific enhancers
Cited by: 25
Author(s): Theodore M. Brody, Wayne Rasband, Kevin Baler, A. Kuzin, Mukta Kundu, Ward F. Odenwald
Software Mentions: 1
Published: over 17 years ago

10.1038/s41598-020-79905-8

Unraveling cardiolipin-induced conformational change of cytochrome c through H/D exchange mass spectrometry and quartz crystal microbalance
Cited by: 0
Author(s): Sin-Cih Sun, Hung-Wei Huang, Yi-Ting Lo, Min‐Chieh Chuang, Yuan-Hao Hsu
Software Mentions: 1
Published: over 3 years ago

10.1186/s12911-020-01352-2

Natural language processing (NLP) tools in extracting biomedical concepts from research articles: a case study on autism spectrum disorder
Cited by: 10
Author(s): Jacqueline Peng, Mengge Zhao, James M Havrilla, Cong Liu, Chunhua Weng, W. Spencer Guthrie, Robert T. Schultz, Kai Wang, Yunyun Zhou
Software Mentions: 1
Published: almost 4 years ago