Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: hcluster
https://packages.ecosyste.ms/registries/pypi.org/packages/hcluster
A hierarchical clustering package for Scipy.
3 versions
Latest release: almost 16 years ago
80 downloads last month
Papers Mentioning hcluster 11
10.1038/s41598-018-34412-9
RNA-Seq transcriptomic profiling of primary murine microglia treated with LPS or LPS + IFNγCited by: 29
Author(s): Marta Pulido-Salgado, José M. Vidal-Taboada, Gerardo Garcıa-Dıaz Barriga, Carme Solà, Josep Saura
Software Mentions: 5
Published: almost 6 years ago
10.1186/s12974-017-0834-5
Myeloid C/EBPβ deficiency reshapes microglial gene expression and is protective in experimental autoimmune encephalomyelitisCited by: 17
Author(s): Marta Pulido-Salgado, José M. Vidal-Taboada, Gerardo Garcıa-Dıaz Barriga, Joan Serratosa, Tony Valente, Paola Castillo, Jonathan Matalonga, Marco Straccia, Josep M. Canals, Annabel F. Valledor, Carme Solà, Josep Saura
Software Mentions: 5
Published: over 7 years ago
10.1186/1471-2105-10-186
The development of a comparison approach for Illumina bead chips unravels unexpected challenges applying newest generation microarraysCited by: 6
Author(s): Daniela Eggle, Svenja Debey–Pascher, Marc Beyer, Joachim L. Schultze
Software Mentions: 4
Published: over 15 years ago
10.1093/gigascience/giy005
GeneSeqToFamily: a Galaxy workflow to find gene families based on the Ensembl Compara GeneTrees pipelineCited by: 9
Author(s): Anil Thanki, Nicola Soranzo, Wilfried Haerty, Robert P. Davey
Software Mentions: 4
Published: over 6 years ago
10.18632/oncotarget.17329
Identification of aberrantly expressed long non-coding RNAs in stomach adenocarcinomaCited by: 49
Author(s): Jianbin Gu, Yong Li, Li Fan, Qun Zhao, Bibo Tan, Kelei Hua, Guobin Wu
Software Mentions: 3
Published: over 7 years ago
10.1038/s41598-020-59110-3
The draft genome of mandrill (Mandrillus sphinx): An Old World monkeyCited by: 3
Author(s): Ye Yin, Ting Yang, Sunil Kumar Sahu, Ziheng Huang, Yaolei Zhang, Yue Song, Wenliang Wang, Xuanmin Guang, Sunil Kumar Sahu, Karsten Kristiansen
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-021-90710-9
Vocal universals and geographic variations in the acoustic repertoire of the common bottlenose dolphinCited by: 17
Author(s): Ana Rita Luís, Laura J. May‐Collado, Nikolina Rako‐Gospić, Tess Gridley, Elena Papale, Alexandre de Freitas Azevedo, Mónica Silva, Giuseppa Buscaino, Denise L. Herzing, Manuel Eduardo dos Santos
Software Mentions: 2
Published: over 3 years ago
10.3389/fphar.2018.00524
Bupleurum marginatum Wall.ex DC in Liver Fibrosis: Pharmacological Evaluation, Differential Proteomics, and Network PharmacologyCited by: 9
Author(s): Xiujie Liu, Yu Shi, Yinghui Hu, Ke Luo, Ying Guo, Weiwei Meng, Yulin Deng, Ruitong Dai
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2019.02101
Chitooligosaccharides Prevents the Development of Colitis-Associated Colorectal Cancer by Modulating the Intestinal Microbiota and MycobiotaCited by: 53
Author(s): Minna Wu, Jianmin Li, Yunying An, Puze Li, Wancheng Xiong, Jinsong Li, Dong Yan, Mingyong Wang, Genshen Zhong
Software Mentions: 1
Published: about 5 years ago
10.1186/1471-2180-12-302
Defining bacterial species in the genomic era: insights from the genus AcinetobacterCited by: 164
Author(s): Jacqueline Chan, Mihail Halachev, Nicholas J. Loman, Chrystala Constantinidou, Mark J. Pallen
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0030230
Two-Stage Clustering (TSC): A Pipeline for Selecting Operational Taxonomic Units for the High-Throughput Sequencing of PCR AmpliconsCited by: 18
Author(s): Xiaotao Jiang, Zhang Hai, Haoyue Sheng, Yu Wang, Yan He, Fei Zou, Hongwei Zhou
Software Mentions: 1
Published: over 12 years ago