pypi projects 9,932
Very Likely Science (100)
pypi: calc
A simple module with the basic functions of a calculator and the calculator itself.Papers that mentioned: 22
Very Likely Science (65)
pypi: chewBBACA
A complete suite for gene-by-gene schema creation and strain identification.Papers that mentioned: 22
Very Likely Science (100)
pypi: fcs
A simple, powerful, and open-source time tracker from the command linePapers that mentioned: 22
Very Likely Science (65)
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pypi: Pluto
Interactive IPython kernel for Jupyter with a built in Vulkan graphics enginePapers that mentioned: 22
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pypi: Gentle
Gentle is a help you quickly submit code to the test environment tools.Papers that mentioned: 22
Very Likely Science (65)
pypi: illumina-utils
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.8+).Papers that mentioned: 22
Very Likely Science (100)
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Very Likely Science (100)
Very Likely Science (65)
pypi: stacks
Build scripts, applications and servers using the concept of facilities operating in a stackPapers that mentioned: 22
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pypi: XAS
Papers that mentioned: 21
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pypi: pam
Papers that mentioned: 21
Very Likely Science (65)
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Very Likely Science (100)
Very Likely Science (65)
pypi: ARIC
ARIC: Accurate and robust inference of cell type proportions from bulk gene expression or DNA methylation dataPapers that mentioned: 21
Very Likely Science (100)
pypi: SPDE
Utilities for geostatistics based on stochastic partial differential equationsPapers that mentioned: 21
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Very Likely Science (100)
pypi: GMMA
Papers that mentioned: 21
Very Likely Science (65)
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pypi: platinum
Frequently used google chrome commands mappings. A User-Agent generator. All for automation.Papers that mentioned: 20
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pypi: labelImg
LabelImg is a graphical image annotation tool and label object bounding boxes in imagesPapers that mentioned: 20
Very Likely Science (100)
pypi: Lasagne
A lightweight library to build and train neural networks in TheanoPapers that mentioned: 20
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pypi: dryad
A pipeline to construct reference free core-genome or SNP phylogenetic trees for examining prokaryote relatedness in outbreaks.Papers that mentioned: 20
Very Likely Science (100)
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pypi: Differential
a Python script for easy uploading torrents to varies PT sites.Papers that mentioned: 20
Very Likely Science (65)
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Very Likely Science (100)
pypi: skyline
Papers that mentioned: 20
Unlikely Science (0)
Very Likely Science (65)
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pypi: NanoStat
Calculate statistics for Oxford Nanopore sequencing data and alignmentsPapers that mentioned: 20
Very Likely Science (100)
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pypi: pyGenomeTracks
Command-line tool to make beautiful and reproducible genome browser snapshotsPapers that mentioned: 20
Very Likely Science (80)
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Very Likely Science (65)
pypi: bespoke
Papers that mentioned: 20
Very Likely Science (65)
Very Likely Science (65)
pypi: LigParGen
Python script to provide BOSS generated OPLS-AA/CM1A(-LBCC) parameters for organic molecules and ligands.Papers that mentioned: 20
Very Likely Science (100)
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pypi: cftool
Get inputs and outputs from Codeforces and others online judgesPapers that mentioned: 20
Very Likely Science (65)
pypi: overlap
Exact calculation of the overlap volume and area of spheres and mesh elementsPapers that mentioned: 20
Very Likely Science (100)
pypi: SLC
A tool that allows you to connect to and run SQL commands to an SQLite3 database easily.Papers that mentioned: 19
Very Likely Science (65)
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Unlikely Science (15)
Very Likely Science (65)
pypi: gprofiler
Python port of the R wrapper for the g:Profiler functional enrichment tool.Papers that mentioned: 19
Very Likely Science (100)
Very Likely Science (100)
pypi: repDNA
a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effectsPapers that mentioned: 19
Very Likely Science (80)
pypi: MUSiCC
MUSICC: A marker genes based framework for metagenomic normalization and accurate profiling of gene abundances in the microbiome.Papers that mentioned: 19
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Very Likely Science (100)
Very Likely Science (100)