Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: service
https://packages.ecosyste.ms/registries/pypi.org/packages/service
Easy Implementation of Background Services
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Latest release: over 5 years ago
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Papers Mentioning service 21
10.1128/mBio.02684-19
Contextual Flexibility in Pseudomonas aeruginosa Central Carbon Metabolism during Growth in Single Carbon SourcesCited by: 49
Author(s): Stephen K. Dolan, Michael Kohlstedt, Stephen Trigg, Pedro P. Vallejo Ramirez, Clemens F. Kaminski, Christoph Wittmann, Martin Welch
Software Mentions: 3
Published: over 4 years ago
10.1186/1756-3305-7-443
Prevalence and phylogenetic analysis of tick-borne encephalitis virus (TBEV) in field-collected ticks (Ixodes ricinus) in southern SwitzerlandCited by: 29
Author(s): Nadia Rieille, Stéphane Bressanelli, Caio Castro Freire, Séverine Arcioni, Lise Gern, Olivier Péter, Maarten J. Voordouw
Software Mentions: 3
Published: over 10 years ago
10.3389/fmicb.2015.01297
Particle-Associated Differ from Free-Living Bacteria in Surface Waters of the Baltic SeaCited by: 132
Author(s): Angelika Rieck, Daniel P. R. Herlemann, Klaus Jürgens, Hans‐Peter Grossart
Software Mentions: 3
Published: almost 9 years ago
10.1371/journal.ppat.1009786
Cuban history of CRF19 recombinant subtype of HIV-1Cited by: 4
Author(s): Anna Zhukova, Jakub Voznica, Miraine Dávila Felipe, Thu‐Hien To, Lissette Pérez, Yenisleidys Martínez, Yanet Pintos, M. L. Rodríguez Méndez, Olivier Gascuel, Vivian Kourí
Software Mentions: 3
Published: about 3 years ago
10.3390/ijms21228420
Methods and Applications of In Silico Aptamer Design and ModelingCited by: 59
Author(s): Andrey A. Buglak, А. В. Самохвалов, Anatoly V. Zherdev, Boris B. Dzantiev
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0162828
The Pre-Eclampsia Ontology: A Disease Ontology Representing the Domain Knowledge Specific to Pre-EclampsiaCited by: 6
Author(s): Satoshi Mizuno, Soichi Ogishima, Hidekazu Nishigori, Daniel Jamieson, Karin Verspoor, Hiroshi Tanaka, Nobuo Yaegashi, Jun Nakaya
Software Mentions: 2
Published: almost 8 years ago
10.1186/s12866-018-1255-z
Delftia sp. LCW, a strain isolated from a constructed wetland shows novel properties for dimethylphenol isomers degradationCited by: 15
Author(s): Mónica Andrea Vásquez-Piñeros, Paula Martinez Lavanchy, Nico Jehmlich, Dietmar H. Pieper, Carlos Arturo Peña Rincón, Hauke Harms, Howard Junca, Hermann J. Heipieper
Software Mentions: 2
Published: about 6 years ago
10.3390/molecules24203798
A Chemosensory GPCR as a Potential Target to Control the Root-Knot Nematode Meloidogyne incognita Parasitism in PlantsCited by: 7
Author(s): Emmanuel Bresso, Diana Fernandez, Deisy Xavier Amora, Philippe Noel, Anne Sophie Petitot, Maria Eugênia Lisei de, Érika Valéria Saliba Albuquerque, Etienne G. J. Danchin, Bernard Maigret, N. F. Martins
Software Mentions: 2
Published: almost 5 years ago
10.3389/fpubh.2020.00085
AQVx—An Interactive Visual Display System for Air Pollution and Public HealthCited by: 6
Author(s): Grant J. Williamson, Christopher Lucani
Software Mentions: 2
Published: over 4 years ago
10.1038/s41598-021-92981-8
Holocene life and microbiome profiling in ancient tropical Lake Chalco, MexicoCited by: 4
Author(s): Bárbara Moguel, Liseth Pérez, Luis David Alcaraz, Jazmín Blaz, Margarita Caballero, Israel Muñoz‐Velasco, Arturo Becerra, Juan Pedro Laclette, Beatriz Ortega‐Guerrero, Claudia Romero-Oliva, Luis Herrera‐Estrella, Socorro Lozano‐García
Software Mentions: 2
Published: about 3 years ago
10.1128/mSphere.00512-20
Sediment Metagenomes as Time Capsules of Lake MicrobiomesCited by: 15
Author(s): Rebecca E. Garner, Irene Gregory‐Eaves, David A. Walsh
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0017613
Transcriptome Phase Distribution Analysis Reveals Diurnal Regulated Biological Processes and Key Pathways in Rice Flag Leaves and Seedling LeavesCited by: 29
Author(s): Wenying Xu, Rendong Yang, Meina Li, Zhuo Xing, Wenqiang Yang, Guang Chen, Han Guo, Xiaofeng Gong, Zhou Du, Zhenhai Zhang, Xueyuan Hu, Dong Wang, Qian Qian, Tai Wang, Zhen Su, Yongbiao Xue
Software Mentions: 1
Published: over 13 years ago
10.5005/jp-journals-10005-1256
A Comparison of Canal-centering ability of Two Nickel-Titanium Rotary Systems with Nickel Hand Instrumentation with Stainless Steel Hand Instrumentation in 10 to 25° Curved Canals using Kuttler\'s CubeCited by: 2
Author(s): Anupama Swarnkar
Software Mentions: 1
Published: over 10 years ago
10.1186/1471-2164-14-129
Neurocarta: aggregating and sharing disease-gene relations for the neurosciencesCited by: 22
Author(s): Élodie Portales-Casamar, Carolyn Ch’ng, Frances Lui, Nicolas St-Georges, Anton Zoubarev, Artemis Y Lai, Mark Lee, Cathy Kwok, Willie Kwok, Luchia Tseng, Paul Pavlidis
Software Mentions: 1
Published: over 11 years ago
10.7150/ijms.50782
MRPL27 contributes to unfavorable overall survival and disease-free survival from cholangiocarcinoma patientsCited by: 3
Author(s): Liping Zhuang, Zhiqiang Meng, Zongguo Yang
Software Mentions: 1
Published: over 3 years ago
10.3390/s150715799
Augmented Robotics Dialog System for Enhancing Human–Robot InteractionCited by: 19
Author(s): Fernándo Alonso-Martín, Álvaro Castro‐González, Francisco Luengo, Miguel Á. Salichs
Software Mentions: 1
Published: about 9 years ago
10.1186/s12864-016-2411-1
Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFACited by: 42
Author(s): Inmaculada García‐Romero, Antonio J. Pérez-Pulido, Yolanda Elisabet González-Flores, Francisca Reyes‐Ramírez, Eduardo Santero, Belén Floriano
Software Mentions: 1
Published: over 8 years ago
10.1186/1471-2148-7-204
Post-duplication charge evolution of phosphoglucose isomerases in teleost fishes through weak selection on many amino acid sitesCited by: 21
Author(s): Yukuto Sato, Mutsumi Nishida
Software Mentions: 1
Published: over 17 years ago
10.1371/journal.pone.0222654
‘Fat’s chances’: Loci for phenotypic dispersion in plasma leptin in mouse models of diabetes mellitusCited by: 1
Author(s): Guy M. L. Perry
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0015356
Tiling Array Analysis of UV Treated Escherichia coli Predicts Novel Differentially Expressed Small PeptidesCited by: 14
Author(s): Gard Thomassen, Ragnhild Weel-Sneve, Alexander D. Rowe, James A. Booth, Jessica M. Lindvall, Karin Lagesen, Knut Ivan Kristiansen, Magnar Bjørås, Torbjørn Rognes
Software Mentions: 1
Published: over 13 years ago
10.1186/s12859-017-1782-x
Improving fold resistance prediction of HIV-1 against protease and reverse transcriptase inhibitors using artificial neural networksCited by: 24
Author(s): Olivier Sheik Amamuddy, Nigel T. Bishop, Özlem Tastan Bishop
Software Mentions: 1
Published: about 7 years ago