Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
pypi projects 9,932
pypi: GSA
Python Package to implement Gravitational Search Algorithm. Documentation at:https://github.com/deepanshu1999/GSAPapers that mentioned: 285
pypi: SE
A Python stream editor for command-line calls or integration into Python programs.Papers that mentioned: 268
pypi: Turk
A framework for interfacing applications and devices with the webPapers that mentioned: 261
pypi: sp
Quickly find out which directories / files are hogging your disk space.Papers that mentioned: 258
pypi: lattice
A framework for developing data models, including schema development and documentation.Papers that mentioned: 251
pypi: PREDICT
Predict: a Radiomics Extensive Digital Interchangable Classification Toolkit.Papers that mentioned: 249
pypi: Theano
Optimizing compiler for evaluating mathematical expressions on CPUs and GPUs.Papers that mentioned: 248
pypi: BioVenn
BioVenn: Create Area-Proportional Venn Diagrams from Biological ListsPapers that mentioned: 247
pypi: finder
Command line interface for searching a given pattern in the given directory/file pathsPapers that mentioned: 236
pypi: analyzer
python project for finance: realtime data collection, analyze, algorithmic tradingPapers that mentioned: 230
pypi: image
Django application that provides cropping, resizing, thumbnailing, overlays and masking for images and videos with the ability to set the center of attention,Papers that mentioned: 212
pypi: BioID
A python package for autonomously identifying Bioinformatic file formats.Papers that mentioned: 208
pypi: ViennaRNA
A library for the prediction and comparison of RNA secondary structures.Papers that mentioned: 200
pypi: NEMO
NEMO is a laboratory logistics web application. Use it to schedule reservations, control tool access, track maintenance issues, and more.Papers that mentioned: 193
pypi: Interactive
A package to interact with any program with a command line console.Papers that mentioned: 187
pypi: MDAnalysis
An object-oriented toolkit to analyze molecular dynamics trajectories.Papers that mentioned: 182
pypi: PhyloSuite
A desktop platform for streamlined molecular sequence data management and state of the art evolutionary phylogenetics studies.Papers that mentioned: 179
pypi: QSAR
Python library for QSAR model from Juvena Machine Learning Team.Papers that mentioned: 176
pypi: pipeline
Easy shell-like pipelines, with input from a file-like objectPapers that mentioned: 175
pypi: COS
Utilities for data taken with the Cosmic Origins Spectrograph on the Hubble Space TelescopePapers that mentioned: 171
pypi: IM
IM is a tool to manage virtual infrastructures on Cloud deploymentsPapers that mentioned: 168
pypi: java
Papers that mentioned: 165pypi: xia2
An expert system for automated reduction of X-Ray diffraction data from macromolecular crystalsPapers that mentioned: 165
pypi: plotly
An open-source, interactive data visualization library for PythonPapers that mentioned: 163
pypi: CNVkit
Copy number variation toolkit for high-throughput sequencing.Papers that mentioned: 161
pypi: Navigator
A framework to create simple, interactive command line tools.Papers that mentioned: 161
pypi: velvet
Beautiful signal processing and communications algorithms in PythonPapers that mentioned: 156
pypi: SurveyGizmo
A Python Wrapper for SurveyGizmo's restful API service.Papers that mentioned: 156
pypi: Django
A high-level Python web framework that encourages rapid development and clean, pragmatic design.Papers that mentioned: 155
pypi: LoRaWAN
Implementation of the LoRaWAN intended to connect to the Things Network Stack (V2-V3)Papers that mentioned: 152
pypi: Swarm
Swarm is a strategy rouge-like space simulator game written with `pygame/python3`.Papers that mentioned: 151
pypi: Assembly
Assembly is a pythonic object-oriented, mid stack, batteries included framework built on Flask, that adds structure to your Flask application, and group your routes by class.Assembly allows developers to build web applications in much the same way they would build any other object-oriented Python program.Assembly Makes Flask Great Again!Papers that mentioned: 147
pypi: PhyloPhlAn
Precise phylogenetic analysis of microbial isolates and genomes from metagenomesPapers that mentioned: 144
pypi: workbench
A scalable framework for security research and development teams.Papers that mentioned: 139