pypi: image | Projects | Ecosyste.ms: Papers

10.1186/s40679-016-0031-0

Analyzing microtomography data with Python and the scikit-image library
Cited by: 22
Author(s): Emmanuelle Gouillart, Juan Nunez-Iglesias, Stéfan van der Walt
Software Mentions: 14
Published: almost 8 years ago

10.7554/eLife.42448

Respiratory syncytial virus co-opts host mitochondrial function to favour infectious virus production
Cited by: 40
Author(s): Mengjie Hu, Keith E. Schulze, Reena Ghildyal, Darren C. Henstridge, Jacek L. Kolanowski, Elizabeth J. New, Yuning Hong, Alan Hsu, Philip M. Hansbro, Peter Wark, Marie A. Bogoyevitch, David A. Jans
Software Mentions: 8
Published: over 5 years ago

10.15252/msb.20199071

Measuring glycolytic flux in single yeast cells with an orthogonal synthetic biosensor
Cited by: 30
Author(s): Francisca Monteiro, Georg Hubmann, Vakil Takhaveev, Silke R. Vedelaar, Justin Norder, Johan Hekelaar, Joana Saldida, Athanasios Litsios, Hein J. Wijma, Alexander Schmidt, Matthias Heinemann
Software Mentions: 8
Published: almost 5 years ago

10.1099/mgen.0.000303

Comparative genomic analysis identifies X-factor (haemin)-independent Haemophilus haemolyticus: a formal re-classification of 'Haemophilus intermedius'
Cited by: 5
Author(s): Tegan M. Harris, Erin P. Price, Derek S. Sarovich, Niels Nørskov‐Lauritsen, Jemima Beissbarth, Anne B. Chang, Heidi Smith‐Vaughan
Software Mentions: 7
Published: almost 5 years ago

10.15252/embj.2020105565

The RNA polymerase II subunit RPB‐9 recruits the integrator complex to terminate Caenorhabditis elegans piRNA transcription
Cited by: 13
Author(s): Ahmet C. Berkyurek, Giulia Furlan, Lisa Lampersberger, Toni Beltran, Eva-Maria Weick, Emily Nischwitz, Isabela Cunha Navarro, Fabian Braukmann, Alper Akay, Jonathan Price, Falk Butter, Peter Sarkies, Eric A. Miska
Software Mentions: 7
Published: almost 4 years ago

10.1002/2211-5463.13211

Prognostic biomarker identification and tumor classification in breast cancer patients by methylation and transcriptome analysis
Cited by: 4
Author(s): Xiongdong Zhong, Guoying Zhong
Software Mentions: 6
Published: over 3 years ago

10.15252/msb.20199146

Mammalian gene expression variability is explained by underlying cell state
Cited by: 85
Author(s): Robert T. Foreman, Roy Wollman
Software Mentions: 6
Published: almost 5 years ago

10.1107/S2059798318007726

Electron diffraction data processing with DIALS
Cited by: 96
Author(s): Max T. B. Clabbers, Tim Gruene, James M. Parkhurst, Jan Pieter Abrahams, David Waterman
Software Mentions: 5
Published: over 6 years ago

10.1186/s12974-021-02206-y

Acute pre-operative ibuprofen improves cognition in a rat model for postoperative cognitive dysfunction
Cited by: 14
Author(s): Klaske Oberman, Iris B. Hovens, Jacco J. de Haan, Joana Falcao-Salles, Barbara L. van Leeuwen, Regien G. Schoemaker
Software Mentions: 4
Published: over 3 years ago

10.7554/eLife.48964

Fibronectin is a smart adhesive that both influences and responds to the mechanics of early spinal column development
Cited by: 18
Author(s): Emilie Guillon, Debapratim Das, Dörthe Jülich, Abdel-Rahman Hassan, Hannah Geller, Scott A. Holley
Software Mentions: 3
Published: over 4 years ago

10.1002/1878-0261.12426

<scp>ADAM</scp> 9 contributes to vascular invasion in pancreatic ductal adenocarcinoma
Cited by: 32
Author(s): Victor Oginga Oria, Paul Lopatta, Tatjana Schmitz, Bogdan‐Tiberius Preca, Alexander Nyström, Catharina Conrad, Jörg W. Bartsch, Birte Kulemann, Jens Hoeppner, Jochen Maurer, Peter Bronsert, Oliver Schilling
Software Mentions: 3
Published: almost 6 years ago

10.1111/febs.15233

Fusobacterium nucleatum promotes epithelial‐mesenchymal transiton through regulation of the lncRNA MIR4435‐2HG/miR‐296‐5p/Akt2/SNAI1 signaling pathway
Cited by: 64
Author(s): Shuwei Zhang, Chen Li, Junchao Liu, Fei Geng, Xiaoting Shi, Qian Li, Ze Lu, Yaping Pan
Software Mentions: 3
Published: almost 5 years ago

10.1107/S1600576718009500

Serial electron crystallography for structure determination and phase analysis of nanocrystalline materials
Cited by: 45
Author(s): Stef Smeets, Xiaodong Zou, Wei Wan
Software Mentions: 3
Published: over 6 years ago

10.1002/aps3.11380

Digitally deconstructing leaves in 3D using X‐ray microcomputed tomography and machine learning
Cited by: 20
Author(s): Guillaume Théroux‐Rancourt, Matthew R. Jenkins, Craig R. Brodersen, Andrew J. McElrone, Elisabeth J. Forrestel, J. Mason Earles
Software Mentions: 3
Published: over 4 years ago

10.7554/eLife.65151

Misic, a general deep learning-based method for the high-throughput cell segmentation of complex bacterial communities
Cited by: 29
Author(s): Swapnesh Panigrahi, Dorothée Murat, Antoine Le Gall, Eugénie Martineau, Kelly Goldlust, Jean-Bernard Fiche, Sara Rombouts, Marcelo Nöllmann, Léon Espinosa, Tâm Mignot
Software Mentions: 3
Published: about 3 years ago

10.1111/ejn.12548

A spatiotemporal study of gliosis in relation to depth electrode tracks in drug-resistant epilepsy
Cited by: 20
Author(s): Joanna Goc, Joan Liu, Sanjay M. Sisodiya, Maria Thom
Software Mentions: 3
Published: over 10 years ago

10.1007/s10456-015-9466-5

AECHL-1, a novel triterpenoid, targets tumor neo-vasculature and impairs the endothelial cell cytoskeleton
Cited by: 13
Author(s): Aparajita Dasgupta, Mithila A. Sawant, Manish S Lavhale, Lakshmi-Surekha Krishnapati, Surendra Ghaskadbi, Sandhya L. Sitasawad
Software Mentions: 3
Published: over 9 years ago

10.1111/febs.14780

Long noncoding <scp>RNA</scp> Crnde attenuates cardiac fibrosis via Smad3‐Crnde negative feedback in diabetic cardiomyopathy
Cited by: 52
Author(s): Dezhi Zheng, Yong Zhang, Yonghe Hu, Jing Guan, Lianbin Xu, Wenjing Xiao, Qinyue Zhong, Chao Ling Ren, Jinfeng Lü, Jiali Liang, Jun Hou
Software Mentions: 3
Published: over 5 years ago

10.1111/cpr.12692

IL‐37b alleviates inflammation in the temporomandibular joint cartilage via IL‐1R8 pathway
Cited by: 24
Author(s): Ping Luo, Chi Kuang Feng, Chao Jiang, Xiaochun Ren, Liming Gou, Ping Ji, Jie Xu
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-021-96995-0

The human type 2 diabetes-specific visceral adipose tissue proteome and transcriptome in obesity
Cited by: 26
Author(s): Nicholas J. Carruthers, Clarissa Strieder‐Barboza, Joseph A. Caruso, Carmen G. Flesher, Nicki A. Baker, Samuel A. Kerk, Alexander Ky, Anne P. Ehlers, Oliver A. Varban, Costas A. Lyssiotis, Carey N. Lumeng, Paul M. Stemmer, Robert W. O’Rourke
Software Mentions: 3
Published: about 3 years ago

10.1111/tra.12290

Vaccinia Virus Infection Requires Maturation of Macropinosomes
Cited by: 43
Author(s): Zaira Rizopoulos, Giuseppe Balistreri, Samuel Kilcher, Caroline Martin, Mohammedyaseen Syedbasha, Ari Helenius, Jason Mercer
Software Mentions: 3
Published: over 9 years ago

10.1002/advs.202001600

A High Throughput and Unbiased Machine Learning Approach for Classification of Graphene Dispersions
Cited by: 8
Author(s): M.J. Abedin, Titon Barua, Mahdokht Shaibani, Mainak Majumder
Software Mentions: 2
Published: about 4 years ago

10.1038/srep32154

TGEV infection up-regulates FcRn expression via activation of NF-κB signaling
Cited by: 23
Author(s): Jianming Guo, Fēi Li, Shaoju Qian, Dingren Bi, Qigai He, Hui Jin, Rui Luo, Shaowen Li, Xianrong Meng, Zili Li
Software Mentions: 2
Published: about 8 years ago

10.1099/mgen.0.000117

Whole-genome sequencing to investigate a non-clonal melioidosis cluster on a remote Australian island
Cited by: 10
Author(s): Derek S. Sarovich, Stephanie N. J. Chapple, Erin P. Price, Mark Mayo, Matthew T. G. Holden, Sharon J. Peacock, Bart J. Currie
Software Mentions: 2
Published: over 7 years ago

10.1111/acel.12923

Elimination of senescent osteoclast progenitors has no effect on the age‐associated loss of bone mass in mice
Cited by: 46
Author(s): Ha‐Neui Kim, Jianhui Chang, Srividhya Iyer, Li Han, Judith Campisi, Stavros C. Manolagas, Daohong Zhou, Maria Almeida
Software Mentions: 2
Published: almost 6 years ago

10.1107/S1600577518004873

A convolutional neural network-based screening tool for X-ray serial crystallography
Cited by: 36
Author(s): Tsung Wei Ke, Aaron S. Brewster, Stella X. Yu, Daniela Ushizima, Chao Yang, Nicholas K. Sauter
Software Mentions: 2
Published: over 6 years ago

10.1186/s40659-021-00331-9

LncRNA MALAT1 aggravates oxygen‐glucose deprivation/reoxygenation-induced neuronal endoplasmic reticulum stress and apoptosis via the miR-195a-5p/HMGA1 axis
Cited by: 13
Author(s): Ying Jia, Lian Yi, Qianqian Li, Tingjiao Liu, Shanshan Yang
Software Mentions: 2
Published: over 3 years ago

10.18632/oncotarget.20054

Regorafenib in combination with silybin as a novel potential strategy for the treatment of metastatic colorectal cancer
Cited by: 28
Author(s): Valentina Belli, Vincenzo Sforza, Claudia Cardone, Erika Martinelli, Giusi Barra, Nunzia Matrone, Stefania Napolitano, Floriana Morgillo, Concetta Tuccillo, Alessandro Di Federico, Marcello Dallio, Carmelina Loguercio, Antonietta Gerarda Gravina, Raffaele De Palma, Fortunato Ciardiello, Teresa Troiani
Software Mentions: 2
Published: over 7 years ago

10.1016/j.mito.2013.12.001

A mitochondrial location for haemoglobins—Dynamic distribution in ageing and Parkinson's disease
Cited by: 44
Author(s): Freya Shephard, Oliver Greville‐Heygate, Oliver Marsh, S. Haro Anderson, Lisa Chakrabarti
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0253666

celldeath: A tool for detection of cell death in transmitted light microscopy images by deep learning-based visual recognition
Cited by: 10
Author(s): Alejandro La Greca, Nelba Pérez, Sheila Castañeda, Paula Melania Milone, María Agustina Scarafía, Alan Miqueas Möbbs, Ariel Waisman, Lucía Moro, Gustavo Sevlever, Carlos Luzzani, Santiago Gabriel Miriuka
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.ppat.1009510

Colonization of the Caenorhabditis elegans gut with human enteric bacterial pathogens leads to proteostasis disruption that is rescued by butyrate
Cited by: 23
Author(s): Alyssa C Walker, Rohan Bhargava, Alfonso S. Vaziriyan-Sani, Christine Pourciau, Emily T. Donahue, Autumn S. Dove, Michael Gebhardt, Garrett L. Ellward, Tony Romeo, Daniel M. Czyż
Software Mentions: 2
Published: over 3 years ago

10.1002/2211-5463.12932

A new protocol for long‐term culture of a specific subpopulation of liver cancer stem cells enriched by cell surface markers
Cited by: 4
Author(s): Biao Zhang, Haiyang Wang, Dongxing Wang, Quan Zeng, Fan Zeng, Jiafei Xi, Xue Nan, Liyun He, Junnian Zhou, Xuetao Pei, Wen Yue
Software Mentions: 2
Published: over 4 years ago

10.3389/fvets.2020.611598

Allogeneic Embryos Disregulate Leukemia Inhibitory Factor (LIF) and Its Receptor in the Porcine Endometrium During Implantation
Cited by: 4
Author(s): Josep M. Cambra, Amaia Jauregi-Miguel, Manuel Álvarez‐Rodríguez, Inmaculada Parrilla, M.A. Gil, Emilio A. Martı́nez, C. Cuello, Heriberto Rodríguez-Martinez, Cristina A. Martínez
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0253777

Illuminating the effect of beneficial blue light and ROS-modulating enzymes in Dupuytren’s disease
Cited by: 0
Author(s): Carina Jaekel, Simon Thelen, Lisa Oezel, Marie H. Wohltmann, Julia Wille, Joachim Windolf, Vera Grotheer
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.18722

Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2
Cited by: 890
Author(s): Dari Kimanius, Björn Forsberg, Sjors H.W. Scheres, Erik Lindahl
Software Mentions: 2
Published: about 8 years ago

10.7554/eLife.53761

Fibrodysplasia ossificans progressiva mutant ACVR1 signals by multiple modalities in the developing zebrafish
Cited by: 21
Author(s): Robyn S. Allen, Benjamin Tajer, Eileen M. Shore, Mary C. Mullins
Software Mentions: 2
Published: about 4 years ago

10.18632/oncotarget.23654

Distinct histone modifications denote early stress-induced drug tolerance in cancer
Cited by: 51
Author(s): Abdullah Al Emran, Diego M. Marzese, Dinoop Ravindran Menon, Mitchell Stark, Joachim Torrano, Heinz Hammerlindl, Gao Zhang, Patricia Brafford, Matthew P. Salomon, Nellie Nelson, Sabrina Hammerlindl, Deepesh Gupta, Gordon B. Mills, Yiling Lu, Richard A. Sturm, Keith T. Flaherty, Dave S. B. Hoon, Brian Gabrielli, Meenhard Herlyn, Helmut Schaider
Software Mentions: 2
Published: almost 7 years ago

10.3390/ma10121346

The Effect of a Two-Stage Heat-Treatment on the Microstructural and Mechanical Properties of a Maraging Steel
Cited by: 20
Author(s): Thomas H. Simm, Lin Zhu Sun, D.R. Galvin, P. Hill, M. Rawson, S. Birosca, Elliot P. Gilbert, H. K. D. H. Bhadeshia, Karen Perkins
Software Mentions: 2
Published: almost 7 years ago

10.1186/s13046-019-1511-6

Exosomal transfer of miR-15b-3p enhances tumorigenesis and malignant transformation through the DYNLT1/Caspase-3/Caspase-9 signaling pathway in gastric cancer
Cited by: 67
Author(s): Shuchun Wei, Lei Peng, Jiajia Yang, Huaiming Sang, Duochen Jin, Xuan Li, Meihong Chen, Weifeng Zhang, Yini Dang, Guoxin Zhang
Software Mentions: 2
Published: almost 5 years ago

10.1186/s13020-016-0104-y

Assessing the quality of Smilacis Glabrae Rhizoma (Tufuling) by colormetrics and UPLC-Q-TOF-MS
Cited by: 11
Author(s): Xi-Cheng He, Tao Yi, Yiqun Tang, Jun Xu, Jianye Zhang, Yazhou Zhang, Lixin Dong, Hubiao Chen
Software Mentions: 2
Published: over 8 years ago

10.1002/brb3.1501

Sevoflurane postconditioning improves spatial learning and memory ability involving mitochondrial permeability transition pore in hemorrhagic shock and resuscitation rats
Cited by: 5
Author(s): Li Zhang, Li Huang, Jingxian Wang, Muchun Zhang, Ye Zhang, Xianwen Hu
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13068-017-0891-0

Thermotolerant genes essential for survival at a critical high temperature in thermotolerant ethanologenic Zymomonas mobilis TISTR 548
Cited by: 22
Author(s): Kannikar Charoensuk, Tomoko Sakurada, Amina Tokiyama, Masayuki Murata, Tomoyuki Kosaka, Pornthap Thanonkeo, Mamoru Yamada
Software Mentions: 1
Published: about 7 years ago

10.3390/antiox10020182

Phytogenic Fabrication of Ag–Fe Bimetallic Nanoparticles for Cell Cycle Arrest and Apoptosis Signaling Pathways in Candida auris by Generating Oxidative Stress
Cited by: 16
Author(s): Majid Rasool Kamli, Vartika Srivastava, Nahid H. Hajrah, Jamal S. M. Sabir, Arif Ali, Maqsood Ahmad Malik, Aijaz Ahmad
Software Mentions: 1
Published: almost 4 years ago

10.3390/biomedicines9050535

Leukotriene B4 Receptors Are Necessary for the Stimulation of NLRP3 Inflammasome and IL-1β Synthesis in Neutrophil-Dominant Asthmatic Airway Inflammation
Cited by: 6
Author(s): Dong Wook Kwak, Donghwan Park, Jae Hong Kim
Software Mentions: 1
Published: over 3 years ago

10.1155/2015/586290

Isolation, Culture, and Characterization of Chicken Cartilage Stem/Progenitor Cells
Cited by: 6
Author(s): Li Lü, Yuehui Ma, Xianglong Li, Xiangchen Li, Chunyu Bai, Jiao Meng, Shuang Zhang, Weijun Guan, Jun-Jie Liu
Software Mentions: 1
Published: almost 10 years ago

10.1002/ame2.12085

Quantitative examination of the inhibitory activation of molecular targeting agents in hepatocellular carcinoma patient‐derived cell invasion via a novel in vivo tumor model
Cited by: 17
Author(s): Hongbin Sun, Fan Feng, Hui Xie, Xiaojuan Li, Qiyu Jiang, Yantao Chai, Zhijie Wang, Ruihua Yang, Ruisheng Li, Jun Hou
Software Mentions: 1
Published: about 5 years ago

10.18632/aging.202678

Follistatin-like protein 1 functions as a potential target of gene therapy in proliferative diabetic retinopathy
Cited by: 4
Author(s): Rui Niu, Zetong Nie, Lin Liu, Yu-Wen E. Chang, Jian-Qun Shen, Qiong Chen, Lijie Dong, Bin‐Jie Hu
Software Mentions: 1
Published: over 3 years ago

10.1155/2018/8459193

Tumor-Associated CD204-Positive Macrophage Is a Prognostic Marker in Clinical Stage I Lung Adenocarcinoma
Cited by: 16
Author(s): Y. K. Sun, Shun Xu
Software Mentions: 1
Published: almost 7 years ago

10.3892/mmr.2014.2805

Tracking of mesenchymal stem cells labeled with gadolinium diethylenetriamine pentaacetic acid by 7T magnetic resonance imaging in a model of cerebral ischemia
Cited by: 22
Author(s): Kuan Geng, Zhong Yang, D. Huang, Meizi Yi, Yanlong Jia, Gen Yan, Xiaofang Cheng, Renhua Wu
Software Mentions: 1
Published: about 10 years ago

10.3390/molecules24030514

Therapeutic Effect of Chitooligosaccharide Tablets on Lipids in High-Fat Diets Induced Hyperlipidemic Rats
Cited by: 38
Author(s): Di Yang, Canji Hu, Xiaoyi Deng, Yan Bai, Hua Cao, Jiao Guo, Zhixing Su
Software Mentions: 1
Published: almost 6 years ago

10.1155/2020/3039184

ATP-Sensitive Potassium Channels Mediate the Cardioprotective Effect of Panax notoginseng Saponins against Myocardial Ischaemia–Reperfusion Injury and Inflammatory Reaction
Cited by: 12
Author(s): Ke Ning, Li Jiang, Ting Hu, Xingyu Wang, Aihua Liu, Yong Bao
Software Mentions: 1
Published: about 4 years ago

10.3390/molecules26040847

Photobiomodulation Therapy on the Guided Bone Regeneration Process in Defects Filled by Biphasic Calcium Phosphate Associated with Fibrin Biopolymer
Cited by: 15
Author(s): Bruna Botteon Della Coletta, Thiago Borges Jacob, Luana Aparecida de Carvalho Moreira, Karina Torres Pomini, Daniela Vieira Buchaim, Rachel Gomes Eleutério, Eliana de Souza Bastos Mazuqueli Pereira, Domingos Donizeti Roque, Marcelie Priscila de Oliveira Rosso, João Vitor Tadashi Cosin Shindo, Marco Antônio Húngaro Duarte, Murilo Priori Alcalde, Rui Seabra Ferreira Júnior, Benedito Barraviera, Jefferson Aparecido Dias, Jesús Carlos Andreo, Rogério Leone Buchaim
Software Mentions: 1
Published: almost 4 years ago

10.1186/1750-1326-7-8

Intraneuronal Aβ detection in 5xFAD mice by a new Aβ-specific antibody
Cited by: 132
Author(s): Katherine L. Youmans, Leon M. Tai, Takahisa Kanekiyo, W. Blaine Stine, Sara Claude Michon, Evelyn Nwabuisi-Heath, Arlene M. Manelli, Yifan Fu, Sean M. Riordan, William A. Eimer, Lester I. Binder, Guojun Bu, Chunjiang Yu, Dean M. Hartley, Mary Jo LaDu
Software Mentions: 1
Published: over 12 years ago

10.1002/1878-0261.12370

Preclinical evidence of the enhanced effectiveness of combined rapamycin and <scp>AICAR</scp> in reducing kidney cancer
Cited by: 9
Author(s): Sitai Liang, Edward A. Medina, Boajie Li, Samy L. Habib
Software Mentions: 1
Published: about 6 years ago

10.1155/2017/3801976

Naoxintong/PPAR<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" id="M1"><mml:mrow><mml:mi mathvariant="bold-italic">γ</mml:mi></mml:mrow></mml:math> Signaling Inhibits Cardiac Hypertrophy via Activation of Autophagy
Cited by: 13
Author(s): Shuping Yuan, Jianhua Jin, Lu Chen, Yongzhong Hou, Hong Wang
Software Mentions: 1
Published: almost 8 years ago

10.3390/molecules21050524

Forsythoside A Controls Influenza A Virus Infection and Improves the Prognosis by Inhibiting Virus Replication in Mice
Cited by: 30
Author(s): Li Deng, Ping Peng, Kui Zheng, Jing Nie, Huachong Xu, Sizhi Wu, Jia Chen, Xiaoyin Chen
Software Mentions: 1
Published: over 8 years ago

10.1111/mec.15230

Different as night and day: Behavioural and life history responses to varied photoperiods inDaphnia magna
Cited by: 10
Author(s): Kurt A. Gust, Alan J. Kennedy, Jennifer G. Laird, Mitchell S. Wilbanks, Natalie D. Barker, Xin Yuan Guan, Nicolas L. Melby, Lyle D. Burgoon, Michael E. Kjelland, Todd M. Swannack
Software Mentions: 1
Published: about 5 years ago

10.1186/1743-422X-8-471

DnaJ homolog Hdj2 Facilitates Japanese Encephalitis Virus Replication
Cited by: 21
Author(s): Chia Hui Wang, Yuru Huang, Ka-Man Chong, Chi Ren Hung, Zhi-Long Ke, Ruey-Yi Chang
Software Mentions: 1
Published: about 13 years ago

10.1186/1743-422X-9-89

Characterization of grass carp reovirus minor core protein VP4
Cited by: 23
Author(s): Liming Yan, Hongbo Guo, Xiaoyun Sun, Lingyun Shao, Fang Qin
Software Mentions: 1
Published: over 12 years ago

10.3390/pathogens10080962

Alpha Enolase 1 Ubiquitination and Degradation Mediated by Ehrlichia chaffeensis TRP120 Disrupts Glycolytic Flux and Promotes Infection
Cited by: 2
Author(s): Bing Zhu, Jere W. McBride
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pgen.1008143

Biallelic HEPHL1 variants impair ferroxidase activity and cause an abnormal hair phenotype
Cited by: 22
Author(s): Prashant Sharma, Marie C. Reichert, Yan Lu, Thomas C. Markello, David R. Adams, Peter Steinbach, Brie K. Fuqua, Xenia Parisi, Stephen G. Kaler, Christopher D. Vulpe, Gregory J. Anderson, William A. Gahl, May Christine V. Malicdan
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1008228

Actin assembly and non-muscle myosin activity drive dendrite retraction in an UNC-6/Netrin dependent self-avoidance response
Cited by: 17
Author(s): Lakshmi Sundararajan, Cody J. Smith, Joseph D. Watson, Bryan A. Millis, Matthew J. Tyska, David M. Miller
Software Mentions: 1
Published: over 5 years ago

10.1242/dmm.047589

Murine myeloid cell MCPIP1 suppresses autoimmunity by regulating B-cell expansion and differentiation
Cited by: 9
Author(s): Ewelina Dobosz, Georg Lorenz, Andrea Ribeiro, Vivian Würf, Marta Wadowska, Jerzy Kotlinowski, Christoph Schmaderer, Jan Potempa, Mingui Fu, Joanna Kozieł, Maciej Lech
Software Mentions: 1
Published: over 3 years ago

10.1186/1476-4598-12-49

Novel mechanism of regulation of fibrosis in kidney tumor with tuberous sclerosis
Cited by: 11
Author(s): Sitai Liang, Gabriela Cuevas, Shaza Tizani, Tiffanie Salas, Huijuan Liu, Baojie Li, Samy L. Habib
Software Mentions: 1
Published: over 11 years ago

10.1242/bio.20146577

Bug22 influences cilium morphology and the post-translational modification of ciliary microtubules
Cited by: 36
Author(s): Teresa Maia, Delphine Gogendeau, Carole Pennetier, Carsten Janke, Renata Basto
Software Mentions: 1
Published: almost 11 years ago

10.1111/acel.12473

NGF controls APP cleavage by downregulating APP phosphorylation at Thr668: relevance for Alzheimer's disease
Cited by: 47
Author(s): Viviana Triaca, Valentina Sposato, Giulia Bolasco, Maria Teresa Ciotti, PierGiuseppe Pelicci, Amalia C. Bruni, Chiara Cupidi, Raffaele Maletta, Marco Feligioni, Robert Nisticò, Nadia Canu, Pietro Calissano
Software Mentions: 1
Published: over 8 years ago

10.18632/aging.104104

TREM2 ameliorates neuroinflammatory response and cognitive impairment via PI3K/AKT/FoxO3a signaling pathway in Alzheimer&#x2019;s disease mice
Cited by: 53
Author(s): Yaping Wang, Lin Yc, Linhan Wang, Hongrui Zhan, Xiaoting Luo, Yanyan Zeng, Wen Wu, Xingmei Zhang, Fang Wang
Software Mentions: 1
Published: about 4 years ago

10.1186/s13041-019-0514-8

Pharmacological and chemogenetic orexin/hypocretin intervention ameliorates Hipp-dependent memory impairment in the A53T mice model of Parkinson’s disease
Cited by: 19
Author(s): Miloš Stanojlović, Jean Pierre Pallais, Michael K. Lee, Catherine M. Kotz
Software Mentions: 1
Published: about 5 years ago

10.1186/s13229-020-00394-7

The eIF4E homolog 4EHP (eIF4E2) regulates hippocampal long-term depression and impacts social behavior
Cited by: 7
Author(s): Sabrina Wiebe, Xiang Qi Meng, Sung Hoon Kim, Xu Zhang, Jean‐Claude Lacaille, Argel Aguilar‐Valles, Nahum Sonenberg
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12903-016-0240-x

Evaluation of oral keratinocyte progenitor and T-lymphocite cells response during early healing after augmentation of keratinized gingiva with a 3D collagen matrix - a pilot study
Cited by: 1
Author(s): Darian Rusu, Bogdan Calenic, Maria Greabu, Alexander Kralev, Marius Boariu, Florina Bojin, S. Anghel, Virgil Păunescu, Octavia Vela, Horia Călniceanu, Ştefan‐Ioan Stratul
Software Mentions: 1
Published: over 8 years ago

10.1002/cre2.26

Basic characteristics of plasma rich in growth factors (PRGF): blood cell components and biological effects
Cited by: 27
Author(s): Kazuhiko Nishiyama, Toshimitsu Okudera, Taisuke Watanabe, Kazushige Isobe, Masashi Suzuki, Hideo Masuki, Hajime Okudera, Kohya Uematsu, Koh Nakata, Tomoyuki Kawase
Software Mentions: 1
Published: over 8 years ago

10.1038/s41419-021-03713-9

Hypoxia-induced miR-210 modulates the inflammatory response and fibrosis upon acute ischemia
Cited by: 7
Author(s): Germana Zaccagnini, Simona Greco, Marialucia Longo, Biagina Maimone, Christine Voellenkle, Paola Fuschi, Matteo Carrara, Pasquale Creo, Davide Maselli, Mario Tirone, Massimiliano Mazzone, Carlo Gaetano, Gaia Spinetti, Fabio Martelli
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2180-12-174

Acid stress response and protein induction in Campylobacter jejuni isolates with different acid tolerance
Cited by: 34
Author(s): Tina Birk, Monica Takamiya Wik, René Lametsch, Susanne Knøchel
Software Mentions: 1
Published: over 12 years ago

10.1099/mgen.0.000067

Whole-genome sequencing of a quarter-century melioidosis outbreak in temperate Australia uncovers a region of low-prevalence endemicity
Cited by: 23
Author(s): Stephanie N. J. Chapple, Derek S. Sarovich, Matthew T. G. Holden, Sharon J. Peacock, Nicky Buller, C.L. Golledge, Mark Mayo, Bart J. Currie, Erin P. Price
Software Mentions: 1
Published: over 8 years ago

10.1099/mgen.0.000054

Response to ‘Refined analyses suggest that recombination is a minor source of genomic diversity in Pseudomonas aeruginosa chronic cystic fibrosis infections’ by Williams et al. (2016 )
Cited by: 0
Author(s): Sophie E. Darch, Alan McNally, Jukka Corander, Stephen P. Diggle
Software Mentions: 1
Published: over 8 years ago

10.1186/s12906-018-2123-y

Extract of Stellerachamaejasme L(ESC) inhibits growth and metastasis of human hepatocellular carcinoma via regulating microRNA expression
Cited by: 11
Author(s): Xiaoni Liu, Shuang Wang, Jianji Xu, Buxin Kou, Dexi Chen, Yajie Wang, Xiongwei Zhu
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0162641

Vimentin, a Novel NF-κB Regulator, Is Required for Meningitic Escherichia coli K1-Induced Pathogen Invasion and PMN Transmigration across the Blood-Brain Barrier
Cited by: 38
Author(s): Sheng Huang, Feng Chen, Liang Peng, Bo Tao, Zhenan Bao, Li Qun Liu, Xuedong Wang, Nirit Mor‐Vaknin, David M. Markovitz, Hong Cao, Yan Zhou
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0064658

A Genome-Wide Screen of CREB Occupancy Identifies the RhoA Inhibitors Par6C and Rnd3 as Regulators of BDNF-Induced Synaptogenesis
Cited by: 55
Author(s): Atom J. Lesiak, Carl Pelz, Hideaki Ando, Mingyan Zhu, Monika A. Davare, Talley J. Lambert, Katelin F. Hansen, Karl Obrietan, Suzanne M. Appleyard, Soren Impey, Gary A. Wayman
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0073693

Atypical E2fs Control Lymphangiogenesis through Transcriptional Regulation of Ccbe1 and Flt4
Cited by: 27
Author(s): Bart Weijts, Andreas van Impel, Stefan Schulte‐Merker, Alain de Bruin
Software Mentions: 1
Published: about 11 years ago

10.1155/2013/260464

Berberine Protects against Palmitate-Induced Endothelial Dysfunction: Involvements of Upregulation of AMPK and eNOS and Downregulation of NOX4
Cited by: 45
Author(s): Ming Zhang, Chunmei Wang, Jing Li, Zhaojie Meng, Shengnan Wei, Ji Li, Richard Bucala, Yulin Li, Li Chen
Software Mentions: 1
Published: almost 12 years ago

10.1186/1471-2121-9-41

New steroidal aromatase inhibitors: Suppression of estrogen-dependent breast cancer cell proliferation and induction of cell death
Cited by: 17
Author(s): Margarida Cepa, Georgina Correia-da-Silva, E. J. Tavares da Silva, Fernanda M.F. Roleira, Marisa Borges, Natércia Teixeira
Software Mentions: 1
Published: over 16 years ago

10.1371/journal.pone.0062426

Pepsin Digest of Wheat Gliadin Fraction Increases Production of IL-1β via TLR4/MyD88/TRIF/MAPK/NF-κB Signaling Pathway and an NLRP3 Inflammasome Activation
Cited by: 87
Author(s): Lenka Palová-Jelínková, Klára Dáňová, Hana Drašarová, M Dvorák, David P. Funda, Petra Fundová, Anna Kotrbová-Kozak, Marie Černá, Jana Kamanová, Stefan F. Martin, Marina A. Freudenberg, Ludmila Tučková
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0226538

Subcellular localization of glypican-5 is associated with dynamic motility of the human mesenchymal stem cell line U3DT
Cited by: 0
Author(s): Masao Takeuchi, Kikuko Takeuchi, Tomoyo Takai, Ritsuko Yamaguchi, Tetsushi Furukawa, Ken‐ichi Akagi, Jun Takeuchi
Software Mentions: 1
Published: almost 4 years ago

10.3390/cancers11050630

Tumour-Derived Laminin α5 (LAMA5) Promotes Colorectal Liver Metastasis Growth, Branching Angiogenesis and Notch Pathway Inhibition
Cited by: 46
Author(s): Alex Gordon-Weeks, Su Yin Lim, Arseniy E. Yuzhalin, Serena Lucotti, Jenny A.F. Vermeer, Keaton Jones, Jianzhou Chen, Ruth J. Muschel
Software Mentions: 1
Published: over 5 years ago

10.1038/s41419-020-02922-y

Cdk5-mediated Drp1 phosphorylation drives mitochondrial defects and neuronal apoptosis in radiation-induced optic neuropathy
Cited by: 34
Author(s): Rong Rong, Xiaobo Xia, Haiqin Peng, Haibo Li, Mengling You, Zhuotao Liang, Fei Yao, Xueyan Yao, Kun Xiong, Jufang Huang, Rongrong Zhou, Dan Ji
Software Mentions: 1
Published: about 4 years ago

10.1038/s41419-018-0989-8

Autophagy-independent induction of LC3B through oxidative stress reveals its non-canonical role in anoikis of ovarian cancer cells
Cited by: 50
Author(s): EM Satyavarapu, Ranjita Das, Chitra Mandal, A. N. Mukhopadhyay
Software Mentions: 1
Published: about 6 years ago

10.1111/acel.12498

Intranasal insulin alleviates cognitive deficits and amyloid pathology in young adult <scp>APP</scp> swe/ <scp>PS</scp> 1dE9 mice
Cited by: 85
Author(s): Yanfang Mao, Zhangyu Guo, Tingting Zheng, Yasi Jiang, Yaping Yan, Xinzhen Yin, Yanxing Chen, Baorong Zhang
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0149046

The Angiotensin Converting Enzyme Insertion/Deletion Polymorphism Modifies Exercise-Induced Muscle Metabolism
Cited by: 23
Author(s): David Vaughan, Michael Brogioli, Thomas Maier, Andy White, Sarah Waldron, Jörn Rittweger, Marco Toigo, Jessica Wettstein, Endre Laczkó, Martin Flück
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0029682

Long-Term Infection and Vertical Transmission of a Gammaretrovirus in a Foreign Host Species
Cited by: 5
Author(s): Toshie Sakuma, Jason M. Tonne, Jessica A. Malcolm, Tayaramma Thatava, Seiga Ohmine, Kah Whye Peng, Yasuhiro Ikeda
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0109926

A Novel Mutation in CLCN1 Associated with Feline Myotonia Congenita
Cited by: 16
Author(s): Barbara Gandolfi, Rob J. Daniel, Dennis P. O’Brien, Ling Guo, Melanie D. Youngs, Stacey B. Leach, B. R. Jones, G. Diane Shelton, Leslie A. Lyons
Software Mentions: 1
Published: about 10 years ago

10.3325/cmj.2013.54.171

Taurine attenuates oxidative stress and alleviates cardiac failure in type I diabetic rats
Cited by: 56
Author(s): Guo Guang Wang, Wei Li, Xiaohua Lü, Xue Zhang, Xu Liu
Software Mentions: 1
Published: over 11 years ago

10.1093/database/baaa003

HSPMdb: a computational repository of heat shock protein modulators
Cited by: 2
Author(s): Prashant Singh, Breezy Unik, Anuradhika Puri, Gandharva Nagpal, Balvinder Singh, Ankur Gautam, Deepak Sharma
Software Mentions: 1
Published: almost 5 years ago

10.1242/dev.186817

mRNA localization is linked to translation regulation in theCaenorhabditis elegansgerm lineage
Cited by: 25
Author(s): Dylan Parker, Lindsay P. Winkenbach, Samuel P. Boyson, Matthew N. Saxton, Camryn Daidone, Zainab A. Al-Mazaydeh, Marc T. Nishimura, Florian Mueller, Erin Osborne Nishimura
Software Mentions: 1
Published: almost 5 years ago

10.1242/dmm.030767

Noncanonical NF-κB signaling and the essential kinase NIK modulate crucial features associated with eosinophilic esophagitis pathogenesis
Cited by: 14
Author(s): Kristin Eden, Daniel E. Rothschild, Dylan K. McDaniel, Bettina Heid, Irving C. Allen
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0045841

Chronic Cladribine Administration Increases Amyloid Beta Peptide Generation and Plaque Burden in Mice
Cited by: 7
Author(s): Crystal D. Hayes, Debadeepta Dey, Juan Pablo Palavicini, Hongjie Wang, Wataru Araki, Madepalli K. Lakshmana
Software Mentions: 1
Published: about 12 years ago

10.3390/md15090268

The Red Algae Compound 3-Bromo-4,5-dihydroxybenzaldehyde Protects Human Keratinocytes on Oxidative Stress-Related Molecules and Pathways Activated by UVB Irradiation
Cited by: 14
Author(s): Mei Jing Piao, Kyoung Ah Kang, Yea Seong Ryu, Kristina Shilnikova, Jeong Eon Park, Yu Jae Hyun, Ao Xuan Zhen, Hee Kyoung Kang, Young Sang Koh, Meejung Ahn, Jin Won Hyun
Software Mentions: 1
Published: about 7 years ago

10.1080/22221751.2021.1925163

A real-time and high-throughput neutralization test based on SARS-CoV-2 pseudovirus containing monomeric infrared fluorescent protein as reporter
Cited by: 15
Author(s): Wen Yang Tsai, Lauren L. Ching, Szu Chia Hsieh, Marian E. Melish, Vivek R. Nerurkar, Wei‐Kung Wang
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12885-015-1850-4

Targeting glycolysis by 3-bromopyruvate improves tamoxifen cytotoxicity of breast cancer cell lines
Cited by: 29
Author(s): Yasmin M. Attia, Hanan S. El‐Abhar, Mahmoud M. Al Marzabani, Samia A. Shouman
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0208713

Mouse model of ocular hypertension with retinal ganglion cell degeneration
Cited by: 19
Author(s): Ryo Mukai, Dong Ho Park, Yoko Okunuki, Eiichi Hasegawa, Garrett Klokman, Clifford B. Kim, Anitha Krishnan, Meredith Gregory-Ksander, Deeba Husain, Joan W. Miller, Kip M. Connor
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0007935

Positive Regulatory Control Loop between Gut Leptin and Intestinal GLUT2/GLUT5 Transporters Links to Hepatic Metabolic Functions in Rodents
Cited by: 66
Author(s): Yassine Sakar, Corinne Nazaret, Philippe Lettéron, Amal Ait Omar, Mathilde Avenati, Benoı̂t Viollet, Robert Ducroc, André Bado
Software Mentions: 1
Published: almost 15 years ago

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