Ecosyste.ms: Papers

10.1371/journal.pone.0069624

Transcriptomic Analysis of Insulin-Sensitive Tissues from Anti-Diabetic Drug Treated ZDF Rats, a T2DM Animal Model
Cited by: 4
Author(s): Yo Na Kim, Sangok Kim, Il Yong Kim, Jae Hoon Shin, Sooyoung Cho, Sun Shin Yi, Wankyu Kim, Kyung Sub Kim, Sanghyuk Lee, Je Kyung Seong
Software Mentions: 8
Published: over 11 years ago

10.1186/s13059-015-0815-x

The estrous cycle surpasses sex differences in regulating the transcriptome in the rat medial prefrontal cortex and reveals an underlying role of early growth response 1
Cited by: 48
Author(s): Florian Duclot, Mohamed Kabbaj
Software Mentions: 6
Published: almost 9 years ago

10.1186/s12985-017-0882-6

ZIKV infection effects changes in gene splicing, isoform composition and lncRNA expression in human neural progenitor cells
Cited by: 49
Author(s): Benxia Hu, Yongxia Huo, Liping Yang, Guijun Chen, Min‐Hua Luo, Jing Yang, Jumin Zhou
Software Mentions: 5
Published: about 7 years ago

10.1186/s12974-020-1706-y

Neonatal hypoxia-ischemia in rat elicits a region-specific neurotrophic response in SVZ microglia
Cited by: 14
Author(s): Urs Fisch, Catherine Brégère, Florian Geier, Laurie Chicha, Raphael Guzman
Software Mentions: 5
Published: almost 5 years ago

10.3389/fimmu.2020.02129

Transcriptome Profiling of Human Monocyte-Derived Macrophages Upon CCL2 Neutralization Reveals an Association Between Activation of Innate Immune Pathways and Restriction of HIV-1 Gene Expression
Cited by: 7
Author(s): Daniela Angela Covino, Karolina Elżbieta Kaczor‐Urbanowicz, Jing Lü, Maria Vincenza Chiantore, Gianna Fiorucci, Maria Fenicia Vescio, Laura Catapano, Cristina Purificato, Clementina Maria Galluzzo, Roberta Amici, Mauro Andreotti, Maria Cristina Gauzzi, Matteo Pellegrini, Laura Fantuzzi
Software Mentions: 5
Published: about 4 years ago

10.1002/ece3.4518

Ecological patterns in the skin microbiota of frogs from tropical Australia
Cited by: 15
Author(s): Keith A. Christian, Chava L. Weitzman, Alea Rose, Mirjam Kaestli, Karen S. Gibb
Software Mentions: 5
Published: about 6 years ago

10.1186/s13041-021-00835-1

Altered hippocampal transcriptome dynamics following sleep deprivation
Cited by: 14
Author(s): Marie E. Gaine, Ethan Bahl, Snehajyoti Chatterjee, Jacob J. Michaelson, Ted Abel, Lisa C. Lyons
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0159093

Molecular Mechanism for Stress-Induced Depression Assessed by Sequencing miRNA and mRNA in Medial Prefrontal Cortex
Cited by: 57
Author(s): Ke Ma, Li Guo, Aiping Xu, Shan Cui, Jinhui Wang
Software Mentions: 5
Published: over 8 years ago

10.1186/s12864-015-2174-0

Extensive variation between tissues in allele specific expression in an outbred mammal
Cited by: 67
Author(s): Amanda J. Chamberlain, Christy J. Vander Jagt, Ben J. Hayes, Majid Khansefid, L. C. Marett, Catriona A. Millen, Thuy Thi Thu Nguyen, Michael E. Goddard
Software Mentions: 5
Published: almost 9 years ago

10.1186/s12931-020-01368-2

IRF4 and STAT3 activities are associated with the imbalanced differentiation of T-cells in responses to inhalable particulate matters
Cited by: 2
Author(s): Jinzhun Wu, Dongyu Ge, Taoling Zhong, Zuojia Chen, Ying Zhou, Lingyun Hou, Xinhua Lin, Jiaxu Hong, Kuai Liu, Hui Qi, Chaoying Wang, Yulin Zhou, Cheng Li, Chuan Wu, Shi Wu, Zuguo Liu, Qiyuan Li
Software Mentions: 4
Published: over 4 years ago

10.3390/cancers12123847

The YAP/TEAD Axis as a New Therapeutic Target in Osteosarcoma: Effect of Verteporfin and CA3 on Primary Tumor Growth
Cited by: 25
Author(s): Sarah Morice, Mathilde Mullard, Régis Brion, Maryne Dupuy, Sarah Renault, Robel Tesfaye, Bénédicte Brounais-Le Royer, Benjamin Ory, Françoise Rédini, Franck Verrecchia
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pgen.1009802

Endothelial lipase mediates efficient lipolysis of triglyceride-rich lipoproteins
Cited by: 12
Author(s): Sumeet A. Khetarpal, Cecilia Vitali, Michael G. Levin, Derek Klarin, Joseph Park, Akhil Pampana, John S. Millar, Takashi Kuwano, Dhavamani Sugasini, Papasani V. Subbaiah, Jeffrey T. Billheimer, Pradeep Natarajan, Daniel J. Rader
Software Mentions: 4
Published: about 3 years ago

10.1002/ece3.3248

Spatial patterns of hypolithic cyanobacterial diversity in Northern Australia
Cited by: 5
Author(s): Keith A. Christian, Mirjam Kaestli, Karen S. Gibb
Software Mentions: 4
Published: over 7 years ago

10.3390/toxins12040219

Plastics in Cyanobacterial Blooms—Genotoxic Effects of Binary Mixtures of Cylindrospermopsin and Bisphenols in HepG2 Cells
Cited by: 11
Author(s): Klara Hercog, Alja Štern, Sara Maisanaba, Metka Filipič, Bojana Žegura
Software Mentions: 4
Published: over 4 years ago

10.3390/genes11070789

Transcriptional Profiling of Normal, Stenotic, and Regurgitant Human Aortic Valves
Cited by: 13
Author(s): Christina L. Greene, Kevin J Jaatinen, Hanjay Wang, Tiffany Koyano, Mary Sheridan Bilbao, Y. Joseph Woo
Software Mentions: 4
Published: over 4 years ago

10.3390/ijns7030059

First Year of TREC-Based National SCID Screening in Sweden
Cited by: 7
Author(s): Christina Göngrich, Olov Ekwall, Mikael Sundin, Nicholas Brodszki, Anders Fasth, Per Marits, Sam Dysting, Susanne Jönsson, Michela Barbaro, Anna Wedell, Ulrika von Döbeln, Rolf Zetterström
Software Mentions: 3
Published: about 3 years ago

10.3390/ijms22147312

Structure, Distribution, Chemical Composition, and Gene Expression Pattern of Glandular Trichomes on the Leaves of Rhus potaninii Maxim
Cited by: 1
Author(s): Qin Lu, Nawaz Haider Bashir, Haixia Wu, Weiwei Wang, Zhang Jin-wen, Yongzhong Cui, Hang Chen
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0086787

Effects of Sulforaphane and 3,3′-Diindolylmethane on Genome-Wide Promoter Methylation in Normal Prostate Epithelial Cells and Prostate Cancer Cells
Cited by: 90
Author(s): Carmen P. Wong, Anna Hsu, Alex Buchanan, Zoraya Palomera-Sánchez, Laura M. Beaver, E. Andrés Houseman, David E. Williams, Roderick H. Dashwood, Emily Ho
Software Mentions: 3
Published: almost 11 years ago

10.3390/ijms22189719

Genome-Wide Analysis of LncRNA in Bovine Mammary Epithelial Cell Injuries Induced by Escherichia Coli and Staphylococcus Aureus
Cited by: 11
Author(s): Changjie Lin, Yifan Zhu, Zhiyu Hao, Haojun Xu, Ting Li, Jinghan Yang, Xi Chen, Yingyu Chen, Aizhen Guo, Changmin Hu
Software Mentions: 3
Published: about 3 years ago

10.1371/journal.ppat.1006476

Innate immunity restricts Citrobacter rodentium A/E pathogenesis initiation to an early window of opportunity
Cited by: 14
Author(s): Stefanie Buschor, Miguelangel Cuenca, Stephanie S. Uster, Olivier P. Schären, Maria L. Balmer, Miguel A. Terrazos, Christian M. Schürch, Siegfried Hapfelmeier
Software Mentions: 3
Published: over 7 years ago

10.1152/physiolgenomics.00123.2014

Identification of conserved hepatic transcriptomic responses to 17β-estradiol using high-throughput sequencing in brown trout
Cited by: 14
Author(s): Tamsyn M. Uren Webster, Janice A. Shears, Karen Moore, Eduarda M. Santos
Software Mentions: 3
Published: about 9 years ago

10.1186/s13041-020-00702-5

Translational changes induced by acute sleep deprivation uncovered by TRAP-Seq
Cited by: 17
Author(s): Lisa C. Lyons, Snehajyoti Chatterjee, Yann Vanrobaeys, Marie E. Gaine, Ted Abel
Software Mentions: 3
Published: almost 4 years ago

10.1007/s00401-019-01976-3

Loss of DPP6 in neurodegenerative dementia: a genetic player in the dysfunction of neuronal excitability
Cited by: 33
Author(s): Rita Cacace, Bavo Heeman, Sara Van Mossevelde, Arne De Roeck, Julie Hoogmartens, Peter De Rijk, Helena Gossye, Kristof De Vos, Wouter De Coster, Mojca Stražišar, Greet De Baets, Joost Schymkowitz, Frédéric Rousseau, Nathalie Geerts, Tim De Pooter, Karin Peeters, Anne Sieben, Jean‐Jacques Martin, Sebastiaan Engelborghs, Eric Salmon, Patrick Santens, Rik Vandenberghe, Patrick Cras, Peter Paul De Deyn, John C. van Swieten, Cornelia M. van Duijn, Julie van der Zee, Kristel Sleegers, Christine Van Broeckhoven
Software Mentions: 3
Published: over 5 years ago

10.7150/thno.42345

PRMT1 is a novel molecular therapeutic target for clear cell renal cell carcinoma
Cited by: 26
Author(s): Jianfeng Wang, Chen Wang, Pan Xu, Xiao Li, Yongning Lu, Di Jin, Xiaomao Yin, Hao Jiang, Jing Huang, Huan Xiong, Fei Ye, Junhong Jin, Yu Chen, Yiqian Xie, Zhifeng Chen, Hong Ding, Hao Zhang, Rongfeng Liu, Hualiang Jiang, Kaixian Chen, Zhiyi Yao, Cheng Luo, Yiran Huang, Yuanyuan Zhang, Jin Zhang
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12912-016-0147-5

Expanding access to pain care for frail, older people in primary care: a cross-sectional study
Cited by: 9
Author(s): Maaike Muntinga, A.P.D. Jansen, François G. Schellevis, Giel Nijpels
Software Mentions: 3
Published: over 8 years ago

10.1534/g3.117.300382

Identifying Genetic Differences Between Dongxiang Blue-Shelled and White Leghorn Chickens Using Sequencing Data
Cited by: 7
Author(s): Qi Zhao, Rongrong Liao, Hao Sun, Zhe Zhang, Qishan Wang, Changsuo Yang, Xiangzhe Zhang, Yuchun Pan
Software Mentions: 3
Published: almost 7 years ago

10.1107/S2053230X20001466

Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization
Cited by: 4
Author(s): A.N. Mitropoulou, Tom Ceska, James T. Heads, Andrew J. Beavil, Alistair J. Henry, James M. McDonnell, Brian J. Sutton, Anna M. Davies
Software Mentions: 3
Published: over 4 years ago

10.18632/aging.103272

Age-related cognitive decline in baboons: modeling the prodromal phase of Alzheimer's disease and related dementias
Cited by: 8
Author(s): Stephanny Lizarraga, Etienne W. Daadi, Gourav Roy-Choudhury, Marcel M. Daadi
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0187891

ChIP-Seq analysis identifies p27(Kip1)-target genes involved in cell adhesion and cell signalling in mouse embryonic fibroblasts
Cited by: 11
Author(s): Atilla Biçer, Serena Orlando, Abul B.M.M.K. Islam, Edurne Gallastegui, Arnaud Besson, Rosa Aligué, Oriol Bachs, María Jesús Pujol
Software Mentions: 3
Published: about 7 years ago

10.1186/1476-4598-13-27

RNAi-mediated silencing of MLL-AF9 reveals leukemia-associated downstream targets and processes
Cited by: 29
Author(s): Katrin K. Fleischmann, Philipp Pagel, Irene Schmid, Adelbert A. Roscher
Software Mentions: 3
Published: almost 11 years ago

10.1186/s12864-015-1254-5

Global transcriptomic profiling demonstrates induction of oxidative stress and of compensatory cellular stress responses in brown trout exposed to glyphosate and Roundup
Cited by: 85
Author(s): Tamsyn M. Uren Webster, Eduarda M. Santos
Software Mentions: 3
Published: almost 10 years ago

10.1523/ENEURO.0252-21.2021

Cre Recombinase Driver Mice Reveal Lineage-Dependent and -Independent Expression of Brs3 in the Mouse Brain
Cited by: 1
Author(s): Allison S. Mogul, Colleen K. Hadley, Haley S. Province, Jordan L Pauli, Оксана Гаврилова, Cuiying Xiao, Richard D. Palmiter, Ramón A. Piñol, Marc L. Reitman
Software Mentions: 3
Published: over 3 years ago

10.3390/ijms21165743

Premature Activation of Immune Transcription Programs in Autoimmune-Predisposed Mouse Embryonic Stem Cells and Blastocysts
Cited by: 0
Author(s): Oktay Kirak, Eugene Ke, Kevin Yi Yang, Anna Schwarz, Lars Plate, Amy Nham, Justin R. Abadejos, Anna Valencia, R. Luke Wiseman, Kathy O. Lui, Manching Ku
Software Mentions: 3
Published: over 4 years ago

10.3390/ijms22073626

Distinct miRNA Signatures and Networks Discern Fetal from Adult Erythroid Differentiation and Primary from Immortalized Erythroid Cells
Cited by: 12
Author(s): Panayiota Papasavva, Nikoletta Papaioannou, Petros Patsali, Ryo Kurita, Yukio Nakamura, Maria Sitarou, Soteroulla Christou, Marina Kleanthous, Carsten W. Lederer
Software Mentions: 3
Published: over 3 years ago

10.1186/s12998-021-00374-5

Chiropractic case reports: a review and bibliometric analysis
Cited by: 19
Author(s): Robert J. Trager, Jeffery A. Dusek
Software Mentions: 3
Published: over 3 years ago

10.1186/1471-2229-11-63

OryzaPG-DB: Rice Proteome Database based on Shotgun Proteogenomics
Cited by: 62
Author(s): Mohamed Helmy, Masaru Tomita, Yasushi Ishihama
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0202770

Charting the onset of Parkinson-like motor and non-motor symptoms in nonhuman primate model of Parkinson’s disease
Cited by: 34
Author(s): Gourav Roy Choudhury, Marcel M. Daadi
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0132296

Lung Transcriptomics during Protective Ventilatory Support in Sepsis-Induced Acute Lung Injury
Cited by: 20
Author(s): Marialbert Acosta‐Herrera, Fabián Lorenzo-Díaz, Maria Pino‐Yanes, Almudena Corrales, Francisco Valladares, Tilman E. Klassert, Basilio Valladares, Hortense Slevogt, Shwu‐Fan Ma, Jesús Villar, Carlos Flores
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0197546

Performance of four crop model for simulations of wheat phenology, leaf growth, biomass and yield across planting dates
Cited by: 42
Author(s): Jasmin Hussain, Tasneem Khaliq, Ashfaq Ahmad, Javaid Akhtar
Software Mentions: 2
Published: over 6 years ago

10.1016/j.molmet.2018.03.003

Epoxygenase inactivation exacerbates diet and aging-associated metabolic dysfunction resulting from impaired adipogenesis
Cited by: 15
Author(s): Antoni Olona, Ximena Terra, Jeong‐Hun Ko, Carme Grau-Bové, Montserrat Pinent, Anna Ardèvol, Ana García Díaz, Aida Moreno‐Moral, Matthew L. Edin, David Bishop‐Bailey, Darryl C. Zeldin, Timothy J. Aitman, Enrico Petretto, Mayte Blay, Jacques Behmoaras
Software Mentions: 2
Published: over 6 years ago

10.1038/srep37197

A novel ENU-induced ankyrin-1 mutation impairs parasite invasion and increases erythrocyte clearance during malaria infection in mice
Cited by: 8
Author(s): Huiyan Huang, Denis C. Bauer, Patrick M. Lelliott, Andreas Greth, Brendan J. McMorran, Simon J. Foote, Gaétan Burgio
Software Mentions: 2
Published: about 8 years ago

10.1523/ENEURO.0103-18.2018

Estradiol Drives the Anorexigenic Activity of Proopiomelanocortin Neurons in Female Mice
Cited by: 34
Author(s): Todd L. Stincic, Pasha Grachev, Martha A. Bosch, Oline K. Rønnekleiv, Martin J. Kelly
Software Mentions: 2
Published: over 6 years ago

10.1186/s12931-021-01762-4

Lung macrophages drive mucus production and steroid-resistant inflammation in chronic bronchitis
Cited by: 8
Author(s): Kristina Andelid, Karolina Öst, Anders Andersson, Esha Mohamed, Zala Jevnikar, Lowie E.G.W. Vanfleteren, Melker Göransson
Software Mentions: 2
Published: over 3 years ago

10.12688/hrbopenres.13042.1

The diagnostic and predictive accuracy of the PRISMA-7 screening tool for frailty in older adults: A systematic review protocol
Cited by: 4
Author(s): O Higginbotham, Aoife O’Neill, Louise Barry, Aoife Leahy, Katie Robinson, Margaret O’Connor, Rose Galvin
Software Mentions: 2
Published: over 4 years ago

10.1523/ENEURO.0166-21.2021

SCD Inhibition Protects from α-Synuclein-Induced Neurotoxicity But Is Toxic to Early Neuron Cultures
Cited by: 7
Author(s): Justin W. Nicholatos, Joost Groot, Shekhar Dhokai, David Tran, Lori Hrdlicka, Thomas M. Carlile, Melissa Bennion, Isin Dalkilic-Liddle, Warren D. Hirst, Andreas Weihofen
Software Mentions: 2
Published: over 3 years ago

10.1038/s42003-021-02541-z

Optimising PHBV biopolymer production in haloarchaea via CRISPRi-mediated redirection of carbon flux
Cited by: 13
Author(s): Lin Lin, Junyu Chen, Ruchira Mitra, Quanxiu Gao, Feiyue Cheng, Tong Xu, Zhenqiang Zuo, Hua Xiang, Jing Han
Software Mentions: 2
Published: about 3 years ago

10.1038/s41598-017-07236-2

Integration of miRNA and mRNA expression profiles reveals microRNA-regulated networks during muscle wasting in cardiac cachexia
Cited by: 37
Author(s): Leonardo Nazário de Moraes, Geysson Javier Fernández, Ivan J. Vechetti, Paula Paccielli Freire, Rodrigo Wagner Alves de Souza, Rolando A R Villacis, Sílvia Regina Rogatto, Patrícia P. Reis, Maeli Dal-Pai-Silva, Robson Francisco Carvalho
Software Mentions: 2
Published: over 7 years ago

10.1186/1471-2164-10-570

Metagenomic islands of hyperhalophiles: the case of Salinibacter ruber
Cited by: 54
Author(s): Lejla Pašić, Beltran Rodriguez-Mueller, Ana-Belén Martín-Cuadrado, Álex Mira, Forest Rohwer, Francisco Rodrı́guez-Valera
Software Mentions: 2
Published: almost 15 years ago

10.3390/microorganisms9050884

Bovine Milk Oligosaccharides and Human Milk Oligosaccharides Modulate the Gut Microbiota Composition and Volatile Fatty Acid Concentrations in a Preclinical Neonatal Model
Cited by: 10
Author(s): Mei Wang, Marcia H. Monaco, Jonas Hauser, Jian Yan, Ryan N. Dilger, Sharon M. Donovan
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0039123

Temporal Network Based Analysis of Cell Specific Vein Graft Transcriptome Defines Key Pathways and Hub Genes in Implantation Injury
Cited by: 21
Author(s): Manoj Bhasin, Zhongyan Huang, Leena Pradhan-Nabzdyk, Janet Malek, Philip J. LoGerfo, Mauricio Contreras, Paul D. Guthrie, Eva Csizmadia, Nicholas D. Andersen, Olivier Kocher, Christiane Ferran, Frank W. LoGerfo
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0104911

Dynamic Modularity of Host Protein Interaction Networks in Salmonella Typhi Infection
Cited by: 6
Author(s): Paltu Kumar Dhal, Ranjan Kumar Barman, Sudipto Saha, Santasabuj Das
Software Mentions: 2
Published: over 10 years ago

10.1002/ece3.1997

Structure and function of gene regulatory networks associated with worker sterility in honeybees
Cited by: 13
Author(s): Julia A. Sobotka, Mark Daley, Sriram Chandrasekaran, Benjamin D. Rubin, Graham Thompson
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0016807

Microgenomic Analysis in Skeletal Muscle: Expression Signatures of Individual Fast and Slow Myofibers
Cited by: 89
Author(s): Francesco Chemello, Camilla Bean, Pasqua Cancellara, Paolo Laveder, Carlo Reggiani, Gerolamo Lanfranchi
Software Mentions: 2
Published: over 13 years ago

10.1111/acel.12835

Targeting the phospholipase A2 receptor ameliorates premature aging phenotypes
Cited by: 28
Author(s): Audrey Griveau, Clotilde Wiel, Benjamin Le Calvé, Dorian V. Ziegler, Sophia Djebali, Marine Warnier, Nadine Martin, Jacqueline Marvel, David Vindrieux, Martin O. Bergö, David Bernard
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0160172

Variation in Human Cytochrome P-450 Drug-Metabolism Genes: A Gateway to the Understanding of Plasmodium vivax Relapses
Cited by: 51
Author(s): Ana Carolina Rios Silvino, Gabriel Luíz Costa, Flávia Carolina Faustino de Araújo, David B. Ascher, Douglas E V Pires, Cor Jésus Fernandes Fontes, Luzia H. Carvalho, Cristiana Ferreira Alves de Brito, Taís Nóbrega de Sousa
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0130625

The Relationship between Cranial Structure, Biomechanical Performance and Ecological Diversity in Varanoid Lizards
Cited by: 34
Author(s): Matthew R. McCurry, Michael Mahony, Philip Clausen, Michelle R. Quayle, Christopher W. Walmsley, Tim S. Jessop, Stephen Wroe, Heather S. Richards, Colin R. McHenry
Software Mentions: 2
Published: over 9 years ago

10.1002/msb.134766

Acetylation dynamics and stoichiometry in <i> <scp>S</scp> accharomyces cerevisiae </i>
Cited by: 216
Author(s): Brian T. Weinert, Vytautas Iešmantavičius, Tarek Moustafa, Christian Schölz, Sebastian Wagner, Christoph Magnes, Rudolf Zechner, Chunaram Choudhary
Software Mentions: 2
Published: almost 11 years ago

10.1155/2018/2767129

Manipulability Inclusive Principle for Assistive Result Evaluation of Assistive Mechanism
Cited by: 0
Author(s): Wenyuan Liang, Yong Yu
Software Mentions: 2
Published: about 6 years ago

10.3390/ijerph16193626

Comparison of Frailty Screening Instruments in the Emergency Department
Cited by: 61
Author(s): Rónán Ó’Caoimh, Maria Costello, Cliona Small, Lynn Spooner, Antoinette Flannery, Liam O’Reilly, Laura Heffernan, Edel Mannion, A.D. Maughan, Alma Joyce, D. William Molloy, John J. O’Donnell
Software Mentions: 2
Published: about 5 years ago

10.1016/j.bbalip.2020.158776

Palmitoleic acid reduces high fat diet-induced liver inflammation by promoting PPAR-γ-independent M2a polarization of myeloid cells
Cited by: 22
Author(s): Camila Oliveira de Souza, Andreza Corrêa Teixeira, Luana Amorim Biondo, Loreana Sanches Silveira, Cristiane Naffah de Souza Breda, Tárcio Teodoro Braga, Niels Olsen Saraiva Câmara, Thiago Belchior, William T. Festuccia, Tiego Aparecido Diniz, Gláucio Monteiro Ferreira, Mário Hiroyuki Hirata, Adriano B. Chaves‐Filho, Marcos Yukio Yoshinaga, Sayuri Miyamoto, Philip C. Calder, J. Sethi, José Cesar Rosa Neto
Software Mentions: 2
Published: about 4 years ago

10.1186/s12876-021-01648-1

Development of a novel model of cholecystectomy in subsequently ovariectomized mice and characterization of metabolic and gastrointestinal phenotypes: a pilot study
Cited by: 1
Author(s): Celeste Alexander, Tzu Wen L. Cross, Anne H Lee, Lindsey K. Ly, Miranda D. Vieson, Jason M. Ridlon, Erik R. Nelson, Kelly S. Swanson
Software Mentions: 2
Published: almost 4 years ago

10.3390/ijms20163907

Significantly Elevated FMR1 mRNA and Mosaicism for Methylated Premutation and Full Mutation Alleles in Two Brothers with Autism Features Referred for Fragile X Testing
Cited by: 12
Author(s): Michael Field, Tracy Dudding‐Byth, Marta Arpone, Emma K. Baker, Solange Aliaga, Carolyn Rogers, Chriselle Hickerton, David Francis, Dean Phelan, Elizabeth E. Palmer, David J. Amor, Howard R. Slater, Lesley Bretherton, Ling Ling, David E. Godler
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2164-15-421

Expression-based network biology identifies immune-related functional modules involved in plant defense
Cited by: 36
Author(s): Joel P. Tully, Aubrey E. Hill, Hadia Ahmed, Ryan Whitley, Anthony Skjellum, M. Shahid Mukhtar
Software Mentions: 2
Published: over 10 years ago

10.1007/s40520-020-01551-x

Frailty, walking ability and self-rated health in predicting institutionalization: an 18-year follow-up study among Finnish community-dwelling older people
Cited by: 16
Author(s): Anna Viljanen, Marika Salminen, Kerttu Irjala, Petri Korhonen, Maarit Wuorela, Raimo Isoaho, Sirkka‐Liisa Kivelä, Tero Vahlberg, Matti Viitanen, Minna Löppönen, Laura Viikari
Software Mentions: 2
Published: over 4 years ago

10.1186/1742-2094-11-73

Peripheral inflammation is associated with remote global gene expression changes in the brain
Cited by: 92
Author(s): Christine E. Thomson, Alison McColl, Jonathan Cavanagh, Gerard J. Graham
Software Mentions: 2
Published: over 10 years ago

10.1096/fj.202001145R

Maresin 1 resolves aged‐associated macrophage inflammation to improve bone regeneration
Cited by: 25
Author(s): Huang Ron, Linda Vi, Xiao-Hua Zong, Gurpreet S. Baht
Software Mentions: 1
Published: over 4 years ago

10.3389/fbioe.2019.00334

An Easy and Efficient Strategy for the Enhancement of Epothilone Production Mediated by TALE-TF and CRISPR/dcas9 Systems in Sorangium cellulosum
Cited by: 11
Author(s): Wei Ye, Taomei Liu, Muzi Zhu, Weimin Zhang, Zilei Huang, Saini Li, Haohua Li, Yali Kong, Yuchan Chen
Software Mentions: 1
Published: almost 5 years ago

10.3389/fgene.2019.00699

Discovery of Genomic Characteristics and Selection Signatures in Korean Indigenous Goats Through Comparison of 10 Goat Breeds
Cited by: 21
Author(s): Jaeyoon Kim, Seongmun Jeong, Kyoung Hyoun Kim, Won-Jun Lim, Hoyeon Lee, Namshin Kim
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2019.00443

Cernunnos/Xlf Deficiency Results in Suboptimal V(D)J Recombination and Impaired Lymphoid Development in Mice
Cited by: 14
Author(s): Benoît Roch, Vincent Abramowski, Julie Chaumeil, Jean‐Pierre de Villartay
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2019.01554

Cdk5 Deletion Enhances the Anti-inflammatory Potential of GC-Mediated GR Activation During Inflammation
Cited by: 15
Author(s): Pauline Pfänder, Miray Fidan, Ute Burret, Lena Lipinski, Sabine Vettorazzi
Software Mentions: 1
Published: over 5 years ago

10.3389/fimmu.2019.00068

The Autoimmune Disorder Susceptibility Gene CLEC16A Restrains NK Cell Function in YTS NK Cell Line and Clec16a Knockout Mice
Cited by: 17
Author(s): Rahul Pandey, Marina Bakay, Heather S. Hain, Bryan Strenkowski, Anastasiya Yermakova, Jake A. Kushner, Jordan S. Orange, Hákon Hákonarson
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2018.00036

‘TIME’: A Web Application for Obtaining Insights into Microbial Ecology Using Longitudinal Microbiome Data
Cited by: 38
Author(s): Krishanu Das Baksi, Bhusan K. Kuntal, Sharmila S. Mande
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmolb.2020.00199

Glutamate-Cysteine Ligase Catalytic Subunit Attenuated Hepatitis C Virus-Related Liver Fibrosis and Suppressed Endoplasmic Reticulum Stress
Cited by: 3
Author(s): Na Fu, Dongdong Li, Wencong Li, Wen Zhao, Siyu Zhang, Lingdi Liu, Suxian Zhao, Jinghua Du, Lingbo Kong, Rongqi Wang, Yuguo Zhang, Yuemin Nan
Software Mentions: 1
Published: over 4 years ago

10.3389/fnins.2020.00024

Metabolic, Molecular, and Behavioral Effects of Western Diet in Serotonin Transporter-Deficient Mice: Rescue by Heterozygosity?
Cited by: 12
Author(s): Ekaterina Veniaminova, Raymond Cespuglio, И. М. Чернуха, Angelika G. Schmitt-Boehrer, С. В. Морозов, Allan V. Kalueff, Oxana Kuznetsova, Daniel C. Anthony, Klaus‐Peter Lesch, Tatyana Strekalova
Software Mentions: 1
Published: almost 5 years ago

10.3389/fphys.2018.00208

Real-Time Rotational Activity Detection in Atrial Fibrillation
Cited by: 12
Author(s): Gonzalo R. Ríos-Muñoz, Ángel Arenal, Antonio Artés-Rodrı́guez
Software Mentions: 1
Published: over 6 years ago

10.3389/fpsyt.2015.00178

Plasma Inflammatory Factors Are Associated with Anxiety, Depression, and Cognitive Problems in Adults with and without Methamphetamine Dependence: An Exploratory Protein Array Study
Cited by: 33
Author(s): Marilyn Huckans, Bret E. Fuller, Alison L. N. Chalker, Madeleine Adams, Jennifer M. Loftis
Software Mentions: 1
Published: almost 9 years ago

10.3389/fnsys.2017.00040

Inactivation of the Lateral Entorhinal Area Increases the Influence of Visual Cues on Hippocampal Place Cell Activity
Cited by: 9
Author(s): Kristin M. Scaplen, Rohan N. Ramesh, Negin Nadvar, Omar J. Ahmed, Rebecca D. Burwell
Software Mentions: 1
Published: over 7 years ago

10.1534/g3.116.030379

Placental Hypomethylation Is More Pronounced in Genomic Loci Devoid of Retroelements
Cited by: 30
Author(s): Aniruddha Chatterjee, Erin C. Macaulay, Euan J. Rodger, Peter A. Stockwell, Matthew Parry, Hester E. Roberts, Tania L. Slatter, Noelyn Hung, Celia Devenish, Ian M. Morison
Software Mentions: 1
Published: over 8 years ago

10.1186/s13073-016-0278-z

Molecular subtyping and improved treatment of neurodevelopmental disease
Cited by: 17
Author(s): Holly A.F. Stessman, Tychele N. Turner, Evan E. Eichler
Software Mentions: 1
Published: over 8 years ago

10.1186/s12955-018-0876-0

Validation of the adapted Leeds sleep evaluation questionnaire in Ethiopian university students
Cited by: 15
Author(s): Dilshad Manzar, Mohammed Salahuddin, Tarekegn Tesfaye Maru, Ahmad H. Alghadir, Shahnawaz Anwer, Ahmed S. BaHammam, Seithikurippu R. Pandi-Perumal
Software Mentions: 1
Published: over 6 years ago

10.1074/jbc.RA120.014709

4-Phenylbutyric acid enhances the mineralization of osteogenesis imperfecta iPSC-derived osteoblasts
Cited by: 9
Author(s): Shinji Takeyari, Takuo Kubota, Yasuhisa Ohata, M. Fujiwara, Taichi Kitaoka, Yuki Taga, Kazunori Mizuno, Keiichi Ozono
Software Mentions: 1
Published: almost 4 years ago

10.7150/jca.32656

High NRBP1 expression promotes proliferation and correlates with poor prognosis in bladder cancer
Cited by: 12
Author(s): Qi Wu, Xin Zhou, Peng Li, Wei Wang, Jun Wang, Mingyue Tan, Tao Le, Jianxin Qiu
Software Mentions: 1
Published: almost 6 years ago

10.1111/jcmm.13103

Tyrphostin AG556 increases the activity of large conductance Ca²⁺-activated K⁺channels by inhibiting epidermal growth factor receptor tyrosine kinase
Cited by: 5
Author(s): Yan Wang, Hai‐Ying Sun, Yingguang Liu, Zheng Song, Gang She, Guosheng Xiao, Yan Wang, Gui-Rong Li, Xingming Deng
Software Mentions: 1
Published: over 7 years ago

10.1210/clinem/dgaa347

An Intronic HCP5 Variant Is Associated With Age of Onset and Susceptibility to Graves Disease in UK and Polish Cohorts
Cited by: 11
Author(s): Laura C Lane, Aleksander Kuś, Tomasz Bednarczuk, Artur Bossowski, Jacek Daroszewski, Beata Jurecka‐Lubieniecka, Heather J. Cordell, Simon H. S. Pearce, Timothy Cheetham, Anna L. Mitchell
Software Mentions: 1
Published: over 4 years ago

10.3390/jcm10102191

Prognostic Role of Immune Checkpoint Regulators in Cholangiocarcinoma: A Pilot Study
Cited by: 5
Author(s): Lu Cao, Prashanth Prithviraj, Ritu Shrestha, Revati Sharma, Matthew Anaka, Kim R. Bridle, George Kannourakis, Darrell H. G. Crawford, Aparna Jayachandran
Software Mentions: 1
Published: over 3 years ago

10.3390/polym13111849

Radiation-Induced Graft Immobilization (RIGI): Covalent Binding of Non-Vinyl Compounds on Polymer Membranes
Cited by: 7
Author(s): Martin Schmidt, Stefan Zahn, Florian Gehlhaar, Andrea Prager, Jan Griebel, Axel Kahnt, Wolfgang Knolle, Robert Konieczny, Roger Gläser, Agnes Schulze
Software Mentions: 1
Published: over 3 years ago

10.21203/rs.3.rs-926789/v1

Zoonotic potential of a novel bat morbillivirus
Cited by: 6
Author(s): Benhur Lee, Satoshi Ikegame, Jillian C. Carmichael, Heather L. Wells, Robert L. Furler, Joshua A. Acklin, Hsiu‐Hui Chiu, Kasopefoluwa Y. Oguntuyo, Robert Cox, Aum R. Patel, Shreyas Kowdle, Christian S. Stevens, Miles Eckley, Shijun Zhan, Jean K. Lim, Takao Hanabusa, Edison L. Durigon, Tony Schountz, Jonathan H. Epstein, Richard K. Plemper, Peter Daszak, Simon J. Anthony
Software Mentions: 1
Published: about 3 years ago

10.1186/s12931-017-0629-3

Transcriptomic analysis comparing mouse strains with extreme total lung capacities identifies novel candidate genes for pulmonary function
Cited by: 8
Author(s): Leema George, Ankita Mitra, Tania A. Thimraj, Martin Irmler, Sangeetha Vishweswaraiah, Lars Lunding, D. Huhn, Alicia Madurga, Johannes Beckers, Heinz Fehrenbach, Swapna Upadhyay, Holger Schulz, George D. Leikauf, Koustav Ganguly
Software Mentions: 1
Published: over 7 years ago

10.1186/s12931-020-01425-w

Host DNA released by NETosis in neutrophils exposed to seasonal H1N1 and highly pathogenic H5N1 influenza viruses
Cited by: 13
Author(s): Louisa Chan, John M. Nicholls, Jsm Peiris, Yu Lung Lau, Michael C. W. Chan, Renee W. Y. Chan
Software Mentions: 1
Published: over 4 years ago

10.1038/srep17151

TGFβ3 (TGFB3) polymorphism is associated with male infertility
Cited by: 12
Author(s): Marek Droździk, Maciej Kaczmarek, Damian Malinowski, Urszula Broś, Anna Kazienko, Rafał Kurzawa, Mateusz Kurzawski
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep19529

Assessing cellular and circulating miRNA recovery: the impact of the RNA isolation method and the quantity of input material
Cited by: 132
Author(s): Victoria El-Khoury, Sandrine Pierson, Tony Kaoma, François Bernardin, Guy Berchem
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep32192

Prevalence and Abundance of Florfenicol and Linezolid Resistance Genes in Soils Adjacent to Swine Feedlots
Cited by: 56
Author(s): Qin Zhao, Yang Wang, Shaolin Wang, Zheng Wang, Xiang-Dang Du, Haiyang Jiang, Xi Xia, Zhangqi Shen, Shuangyang Ding, Congming Wu, Bo Zhou, Yongning Wu, Jianzhong Shen
Software Mentions: 1
Published: about 8 years ago

10.1038/srep36804

Contribution of sleep to the repair of neuronal DNA double-strand breaks: evidence from flies and mice
Cited by: 52
Author(s): Michele Bellesi, Daniel Bushey, Mattia Chini, Giulio Tononi, Chiara Cirelli
Software Mentions: 1
Published: about 8 years ago

10.1038/srep40144

Predictive screening of M1 and M2 macrophages reveals the immunomodulatory effectiveness of post spinal cord injury azithromycin treatment
Cited by: 114
Author(s): John C. Gensel, Timothy J. Kopper, Bei Zhang, Michael B. Orr, William M. Bailey
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41598-017-07513-0

MicroRNA-132 promotes fibroblast migration via regulating RAS p21 protein activator 1 in skin wound healing
Cited by: 32
Author(s): Xi Li, Dongqing Li, Jakob D. Wikström, Andor Pivarcsi, Enikö Sonkoly, Mona Ståhle, Ning Xu Landén
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-017-08422-y

Isoliquiritigenin modulates miR-374a/PTEN/Akt axis to suppress breast cancer tumorigenesis and metastasis
Cited by: 44
Author(s): Peng Fu, Hailin Tang, Peng Liu, Jiangang Shen, Xin‐Yuan Guan, Xing Xie, Jihai Gao, Liang Xiong, Lei Jia, Jianping Chen, Cheng Peng
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-21004-w

Inactivation of TRPM7 kinase in mice results in enlarged spleens, reduced T-cell proliferation and diminished store-operated calcium entry
Cited by: 39
Author(s): Pavani Beesetty, Krystyna Blanka Wieczerzak, Jennifer N. Gibson, Taku Kaitsuka, Charles Tuan Luu, Masayuki Matsushita, J. Ashot Kozak
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-018-26129-6

Knockdown of RNA interference pathway genes impacts the fitness of western corn rootworm
Cited by: 20
Author(s): Courtney Davis-Vogel, Ángel R. Ortíz, Lisa Procyk, Jonathan Robeson, Adane Kassa, Yiwei Wang, Emily Huang, Carl Walker, Amit Sethi, Mark E. Nelson, Dipali G. Sashital
Software Mentions: 1
Published: over 6 years ago

10.1038/s41598-019-49850-2

Magnetic Resonance Imaging as a Biomarker in Rodent Peripheral Nerve Injury Models Reveals an Age-Related Impairment of Nerve Regeneration
Cited by: 18
Author(s): E. Giorgetti, Michael Obrecht, Marie Ronco, Moh Panesar, Christian Lambert, Nathalie Accart, Arno Doelemeyer, Mark S. Nash, Michael Bidinosti, Nicolau Beckmann
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-019-51618-7

Abnormally Methylated FMR1 in Absence of a Detectable Full Mutation in a U.S.A Patient Cohort Referred for Fragile X Testing
Cited by: 8
Author(s): Charles H. Hensel, Rena Vanzo, Megan M. Martin, Ling Ling, Solange Aliaga, Minh Bui, David Francis, Hope Twede, Michael Field, Jonathon W. Morison, David J. Amor, David E. Godler
Software Mentions: 1
Published: about 5 years ago