Ecosyste.ms: Papers

10.1111/mec.15179

Salinity drives meiofaunal community structure dynamics across the Baltic ecosystem
Cited by: 25
Author(s): Elias Broman, Caroline Raymond, Christian Sommer, Jonas S. Gunnarsson, Simon Creer, Francisco J. A. Nascimento
Software Mentions: 10
Published: almost 5 years ago

10.1111/1755-0998.13219

Genetic structure and insecticide resistance characteristics of fall armyworm populations invading China
Cited by: 103
Author(s): Lei Zhang, Bo Liu, Wengang Zheng, Conghui Liu, Dandan Zhang, Shengyuan Zhao, Zaiyuan Li, Pengjun Xu, Kenneth Wilson, Amy Withers, Christopher M. Jones, Judith A. Smith, Gilson Chipabika, Donald L. Kachigamba, Kiwoong Nam, Emmanuelle d’Alençon, Bei Liu, Xinyue Liang, Minghui Jin, Chao Wu, Swapan Chakrabarty, Xinming Yang, Yuying Jiang, Jie Liu, Xiaolin Liu, Weipeng Quan, Guirong Wang, Wei Fan, Wanqiang Qian, Kongming Wu, Yutao Xiao
Software Mentions: 10
Published: almost 4 years ago

10.1111/mec.15735

Phylogenetic and geographical analysis of a retrovirus during the early stages of endogenous adaptation and exogenous spread in a new host
Cited by: 11
Author(s): Bonnie Chaban, Faye Wedrowicz, Fiona Hogan, Peter Timms
Software Mentions: 9
Published: over 3 years ago

10.1371/journal.pone.0153108

Integrative Taxonomy of Southeast Asian Snail-Eating Turtles (Geoemydidae: Malayemys) Reveals a New Species and Mitochondrial Introgression
Cited by: 22
Author(s): Flora Ihlow, Melita Vamberger, Morris Flecks, Timo Hartmann, Michael Cota, Sunchai Makchai, Pratheep Meewattana, J. E. Dawson, Long Kheng, Dennis Rödder, Uwe Fritz
Software Mentions: 7
Published: about 8 years ago

10.1038/s41598-018-33326-w

Spotlight on islands: on the origin and diversification of an ancient lineage of the Italian wall lizard Podarcis siculus in the western Pontine Islands
Cited by: 11
Author(s): Gabriele Senczuk, Katja Havenstein, Valentina Milana, Chiara Ripa, Emanuela De Simone, Ralph Tiedemann, Riccardo Castiglia
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0179557

Plio-Pleistocene phylogeography of the Southeast Asian Blue Panchax killifish, Aplocheilus panchax
Cited by: 21
Author(s): Samantha V. Beck, Gary R. Carvalho, Axel Barlow, Lukas Rüber, Heok Hui Tan, Estu Nugroho, Daisy Wowor, Siti Azizah Mohd Nor, Fabian Herder, Zainal A. Muchlisin, Mark de Bruyn
Software Mentions: 7
Published: almost 7 years ago

10.1038/s41598-017-02157-6

Molecular phylogenetics and biogeography of the mint tribe Elsholtzieae (Nepetoideae, Lamiaceae), with an emphasis on its diversification in East Asia
Cited by: 22
Author(s): Pan Li, Zhe-Chen Qi, Luxian Liu, Tetsuo Ohi‐Toma, Dong Kun Lee, Tsung‐Hsin Hsieh, Chengxin Fu, Kenneth M. Cameron, Ying‐Xiong Qiu
Software Mentions: 7
Published: about 7 years ago

10.1111/j.1365-294X.2010.04961.x

Hybridization and restricted gene flow between native and introduced stocks of Alpine whitefish (Coregonus sp.) across multiple environments
Cited by: 44
Author(s): Kathrin A. Winkler, Barbara Pamminger-Lahnsteiner, Josef Wanzenböck, Steven Weiss
Software Mentions: 6
Published: over 13 years ago

10.1111/eva.12047

A phylomedicine approach to understanding the evolution of auditory sensory perception and disease in mammals
Cited by: 14
Author(s): John D. Kirwan, Michaël Bekaert, Jennifer M. Commins, Kalina T. J. Davies, Stephen J. Rossiter, Emma C. Teeling
Software Mentions: 6
Published: about 11 years ago

10.1002/ece3.4237

Gene flow and Andean uplift shape the diversification of <i>Gasteracantha cancriformis</i> (Araneae: Araneidae) in Northern South America
Cited by: 19
Author(s): Fabian C. Salgado-Roa, Carolina Pardo‐Díaz, Eloisa Lasso, Carlos F. Arias, Vera Nisaka Solferini, Camilo Salazar
Software Mentions: 6
Published: almost 6 years ago

10.1099/vir.0.045351-0

Evolution of the hepatitis E virus hypervariable region
Cited by: 34
Author(s): Donald B. Smith, Jeff Vanek, Sandeep Ramalingam, Ingólfur Johannessen, Kate Templeton, Peter Simmonds
Software Mentions: 6
Published: over 11 years ago

10.1099/vir.0.053686-0

Proposals for the classification of human rhinovirus species A, B and C into genotypically assigned types
Cited by: 166
Author(s): Chloe McIntyre, Nick J. Knowles, Peter Simmonds
Software Mentions: 6
Published: almost 11 years ago

10.1186/s12862-017-0968-1

Distinct genetic differentiation and species diversification within two marine nematodes with different habitat preference in Antarctic sediments
Cited by: 21
Author(s): Freija Hauquier, Frédérik Leliaert, Annelien Rigaux, Sofie Derycke, Ann Vanreusel
Software Mentions: 5
Published: almost 7 years ago

10.1099/mgen.0.000207

Taxonogenomics reveal multiple novel genomospecies associated with clinical isolates of Stenotrophomonas maltophilia
Cited by: 20
Author(s): Prabhu B. Patil, Sanjeet Kumar, Samriti Midha, Vikas Gautam
Software Mentions: 5
Published: almost 6 years ago

10.1111/eva.12189

Fine‐scale genetic correlates to condition and migration in a wild cervid
Cited by: 21
Author(s): Joseph M. Northrup, Aaron B. A. Shafer, Charles R. Anderson, David W. Coltman, George Wittemyer
Software Mentions: 5
Published: over 9 years ago

10.1186/s12881-020-01099-7

Understanding the molecular association between hyperkalemia and lung squamous cell carcinomas
Cited by: 2
Author(s): Xianping Meng, Huiqi Lu, Xia Jiang, Bin Huang, Song Wu, Guiping Yu, Hongbao Cao
Software Mentions: 5
Published: over 3 years ago

10.1002/ece3.4161

Male-biased dispersal and the potential impact of human-induced habitat modifications on the Neotropical bat<i>Trachops cirrhosus</i>
Cited by: 7
Author(s): Tanja K. Halczok, Stefan Dominik Brändel, Victoria Flores, Sébastien J. Puechmaille, Marco Tschapka, Rachel A. Page, Gerald Kerth
Software Mentions: 5
Published: about 6 years ago

10.1111/1751-7915.12239

Detection and evolutionary analysis of picobirnaviruses in treated wastewater
Cited by: 9
Author(s): Shiwei Zhang, Ruihua Bai, Run Feng, Hongxun Zhang, Lixin Liu
Software Mentions: 5
Published: over 9 years ago

10.1002/ece3.2931

Phylogeography of a widespread small carnivore, the western spotted skunk (<i>Spilogale gracilis</i>) reveals temporally variable signatures of isolation across western North America
Cited by: 11
Author(s): Adam W. Ferguson, Molly M. McDonough, Gema I. Guerra, Margaret Rheude, Jerry W. Dragoo, Loren K. Ammerman, Robert C. Dowler
Software Mentions: 5
Published: about 7 years ago

10.1099/vir.0.068429-0

Consensus proposals for classification of the family Hepeviridae
Cited by: 549
Author(s): Donald B. Smith, Peter Simmonds, Shahid Jameel, Suzanne U. Emerson, Tim J. Harrison, Xiang‐Jin Meng, Hiroaki Okamoto, Wim van der Poel, Michael A. Purdy
Software Mentions: 5
Published: over 9 years ago

10.1111/jbi.12471

Speciation in the dark: diversification and biogeography of the deep‐sea gastropod genus<i>Scaphander</i>in the Atlantic Ocean
Cited by: 26
Author(s): Mari Heggernes Eilertsen, Manuel António E. Malaquias
Software Mentions: 5
Published: over 9 years ago

10.1186/s12866-021-02114-4

Genomic islands mediate environmental adaptation and the spread of antibiotic resistance in multiresistant Enterococci - evidence from genomic sequences
Cited by: 13
Author(s): Weiwei Li, Ailan Wang
Software Mentions: 5
Published: about 3 years ago

10.1186/s12881-020-01108-9

Deep vein thrombosis inhibitor may play a therapeutic role in post-stroke patients
Cited by: 1
Author(s): Xiao Xiang, Di Yuan, Peiyan Kong, Ting Chen, Han Yao, Shijia Lin, Xi Zhang, Hongbao Cao
Software Mentions: 5
Published: over 3 years ago

10.1099/jgv.0.000464

Evolution of infectious bronchitis virus in China over the past two decades
Cited by: 52
Author(s): Ye Zhao, Hui Zhang, Jing Zhao, Qi Zhong, Ji Hui Jin, Guo Zhong Zhang
Software Mentions: 5
Published: almost 8 years ago

10.3389/fneur.2020.00590

Preeclampsia Drives Molecular Networks to Shift Toward Greater Vulnerability to the Development of Autism Spectrum Disorder
Cited by: 4
Author(s): Qinglian Xie, Zhe Li, Yan Wang, Shan Zaidi, Ancha Baranova, Fuquan Zhang, Hongbao Cao
Software Mentions: 4
Published: almost 4 years ago

10.1186/1471-2180-10-65

Comparative genomics of VirR regulons in Clostridium perfringens strains
Cited by: 10
Author(s): Antonio Frandi, Alessio Mengoni, Matteo Brilli
Software Mentions: 4
Published: about 14 years ago

10.1099/ijsem.0.004795

Listeria cossartiae sp. nov., Listeria immobilis sp. nov., Listeria portnoyi sp. nov. and Listeria rustica sp. nov., isolated from agricultural water and natural environments
Cited by: 51
Author(s): Catharine R Carlin, Jingqiu Liao, Daniel Weller, Xiaodong Guo, Renato H. Orsi, Martin Wiedmann
Software Mentions: 4
Published: about 3 years ago

10.1099/mgen.0.000039

Whole-genome sequencing investigation of animal-skin-drum-associated UK anthrax cases reveals evidence of mixed populations and relatedness to a US case
Cited by: 9
Author(s): Steven T. Pullan, Talima Pearson, Jennie Latham, Joanne Mason, Barry Atkinson, Nigel Silman, Chung K. Marston, Jason W. Sahl, Dawn N. Birdsell, Alex R. Hoffmaster, Paul Keim, Richard Vipond
Software Mentions: 4
Published: over 8 years ago

10.1099/mgen.0.000426

Symbiosis islands of Loteae-nodulating Mesorhizobium comprise three radiating lineages with concordant nod gene complements and nodulation host-range groupings
Cited by: 4
Author(s): Benjamin J. Perry, John T. Sullivan, Elena Colombi, Riley Murphy, Joshua P. Ramsay, Clive W. Ronson
Software Mentions: 4
Published: over 3 years ago

10.1111/mec.13186

Ecological host fitting of <i> <scp>T</scp> rypanosoma cruzi </i> <scp>T</scp> c <scp>I</scp> in <scp>B</scp> olivia: mosaic population structure, hybridization and a role for humans in <scp>A</scp> ndean parasite dispersal
Cited by: 37
Author(s): Louisa A. Messenger, Lineth García, Mathieu Vanhove, Carlos Huaranca, Marinely Bustamante, Mary-Cruz Torrico, Faustino Torrico, Michael A. Miles, Martin S. Llewellyn
Software Mentions: 4
Published: about 9 years ago

10.1186/1471-2105-10-251

SNAD: sequence name annotation-based designer
Cited by: 6
Author(s): Igor A. Sidorov, Denis A. Reshetov, Alexander E. Gorbalenya
Software Mentions: 4
Published: almost 15 years ago

10.1111/mec.14377

Hybrid asexuality as a primary postzygotic barrier between nascent species: On the interconnection between asexuality, hybridization and speciation
Cited by: 59
Author(s): Karel Janko, Jan Pačes, Hilde Wilkinson‐Herbots, Rui J. Costa, Jan Röslein, Pavel Drozd, Nataliia Iakovenko, Jakub Rídl, Miluše Hroudová, Ján Kočí, Radka Reifová, Vendula Šlechtová, Lukáš Choleva
Software Mentions: 4
Published: over 6 years ago

10.1099/mgen.0.000095

Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent evolution under host selection
Cited by: 16
Author(s): Andrew C. Barnes, J. Delamare-Deboutteville, Nicholas Gudkovs, Cara L. Brosnahan, R. I. Guy Morrison, J Carson
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.4861

Living on the edge: Exploring the role of coastal refugia in the Alexander Archipelago of Alaska
Cited by: 15
Author(s): Yadéeh E. Sawyer, Stephen O. MacDonald, Enrique P. Lessa, Joseph A. Cook
Software Mentions: 4
Published: over 5 years ago

10.1099/mgen.0.000205

Genomic surveillance of Neisseria gonorrhoeae to investigate the distribution and evolution of antimicrobial-resistance determinants and lineages
Cited by: 37
Author(s): Koji Yahara, Shuichi Nakayama, Ken Shimuta, Ken-ichi Lee, Masatomo Morita, Takuya Kawahata, Toshiro Kuroki, Yuko Watanabe, Hitomi Ohya, Mitsuru Yasuda, Takashi Deguchi, Xavier Didelot, Makoto Ohnishi
Software Mentions: 4
Published: almost 6 years ago

10.1002/2211-5463.12705

Analysis of Bn <scp>MTL</scp> , a novel metallothionein‐like protein in the bast fiber crop Ramie ( <i>Boehmeria nivea</i> )
Cited by: 3
Author(s): Gang Gao, Jikang Chen, Ping Chen, Kunmei Chen, Aminu Shehu Abubakar, Chang Yeon Yu, Aiguo Zhu
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pgen.1003443

Analysis of Rare, Exonic Variation amongst Subjects with Autism Spectrum Disorders and Population Controls
Cited by: 128
Author(s): Li Liu, Aniko Sabo, Benjamin M. Neale, Uma Nagaswamy, Christine Stevens, Elaine T. Lim, Corneliu Bodea, Donna M. Muzny, Jeffrey G. Reid, Eric Banks, Hilary Coon, Mark A. DePristo, Huyen Dinh, Tim Fennel, Jason Flannick, Stacey Gabriel, Kiran Garimella, Shannon Gross, Alicia Hawes, Lora Lewis, Vladimir Makarov, Jared Maguire, Irene Newsham, Ryan Poplin, Stephan Ripke, Khalid Shakir, Kaitlin E. Samocha, Yuanqing Wu, Eric Boerwinkle, Joseph D. Buxbaum, Edwin H. Cook, Bernie Devlin, Gerard D. Schellenberg, James S. Sutcliffe, Mark J. Daly, Richard A. Gibbs, Kathryn Roeder
Software Mentions: 4
Published: about 11 years ago

10.1111/ppa.13001

Analyses of seven new whole genome sequences of cassava brown streak viruses in Mozambique reveals two distinct clades: evidence for new species
Cited by: 8
Author(s): J. J. G. Amisse, Joseph Ndunguru, Fred Tairo, Elijah Ateka, Laura M. Boykin, Monica A. Kehoe, Nurbibi Cossa, Chrissie Rey, Peter Sseruwagi
Software Mentions: 4
Published: about 5 years ago

10.1186/s12862-018-1148-7

High polymorphism in MHC-DRB genes in golden snub-nosed monkeys reveals balancing selection in small, isolated populations
Cited by: 16
Author(s): Pei Zhang, Kang Huang, Bingyi Zhang, Derek W. Dunn, Dan Chen, Fan Li, Qi Xin, Songtao Guo, Baoguo Li
Software Mentions: 4
Published: about 6 years ago

10.1099/mgen.0.000153

Development and implementation of multilocus sequence typing to study the diversity of the yeast Kluyveromyces marxianus in Italian cheeses
Cited by: 13
Author(s): Fabrizia Tittarelli, Javier A. Varela, Loughlin Gethins, Catherine Stanton, R. Paul Ross, Giovanna Suzzi, L. Grazia, Rosanna Tofalo, John P. Morrissey
Software Mentions: 4
Published: over 6 years ago

10.1111/tpj.14454

Metabolic diversification of nitrogen‐containing metabolites by the expression of a heterologous lysine decarboxylase gene in Arabidopsis
Cited by: 10
Author(s): Y. Shimizu, Amit Rai, Yuko Okawa, Hajime Tomatsu, Masaru Satô, Kota Kera, Hideyuki Suzuki, Kazuki Saito, Mami Yamazaki
Software Mentions: 4
Published: over 4 years ago

10.1099/acmi.0.000015

Phylogenomics insights into order and families of Lysobacterales
Cited by: 19
Author(s): Sanjeet Kumar, Kanika Bansal, Prashant P. Patil, Prabhu B. Patil
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-021-96886-4

Multiple strain analysis of Streptomyces species from Philippine marine sediments reveals intraspecies heterogeneity in antibiotic activities
Cited by: 11
Author(s): Chuckcris P. Tenebro, Dana Joanne Von L. Trono, Carmela Vannette B. Vicera, Edna M. Sabido, Jovito A. Ysulat, Aaron Joseph M. Macaspac, Kimberly A. Tampus, Trisha Alexis P. Fabrigar, Jonel P. Saludes, Doralyn S. Dalisay
Software Mentions: 4
Published: over 2 years ago

10.1099/mgen.0.000059

Emergence of a novel lineage containing a prophage in emm/M3 group A Streptococcus associated with upsurge in invasive disease in the UK
Cited by: 23
Author(s): Ali Al‐Shahib, Anthony Underwood, Baharak Afshar, Claire E. Turner, Theresa Lamagni, Shiranee Sriskandan, Androulla Efstratiou
Software Mentions: 4
Published: almost 8 years ago

10.1111/1755-0998.12361

One species in eight: <scp>DNA</scp> barcodes from type specimens resolve a taxonomic quagmire
Cited by: 51
Author(s): Marko Mutanen, Mari Kekkonen, Sean W. J. Prosser, Paul D. N. Hebert, Lauri Kaila
Software Mentions: 4
Published: over 9 years ago

10.1099/mic.0.2007/015479-0

Variation in the Neisseria lactamica porin, and its relationship to meningococcal PorB
Cited by: 18
Author(s): Julia S. Bennett, Martin J. Callaghan, Jeremy P. Derrick, Martin C. J. Maiden
Software Mentions: 3
Published: about 16 years ago

10.1111/j.1365-2699.2010.02472.x

Phylogeography of the dark kangaroo mouse, Microdipodops megacephalus: cryptic lineages and dispersal routes in North America’s Great Basin
Cited by: 16
Author(s): John C. Hafner, Nathan S. Upham
Software Mentions: 3
Published: over 13 years ago

10.1111/irv.12131

Identification of group <scp>B</scp> respiratory syncytial viruses that lack the 60‐nucleotide duplication after six consecutive epidemics of total <scp>BA</scp> dominance at coastal <scp>K</scp> enya
Cited by: 18
Author(s): Charles N. Agoti, Caroline W. Gitahi, Graham F. Medley, Patricia A. Cane, D. James Nokes
Software Mentions: 3
Published: almost 11 years ago

10.1111/jzs.12110

Gene flow, population growth and a novel substitution rate estimate in a subtidal rock specialist, the black‐faced blenny<i><scp>T</scp>ripterygion delaisi</i>(<scp>P</scp>erciformes,<scp>B</scp>lennioidei,<scp>T</scp>ripterygiidae) from the<scp>A</scp>driatic<scp>S</scp>ea
Cited by: 15
Author(s): Stephan Koblmüller, Bernd Steinwender, Sara Weiß, Kristina M. Sefc
Software Mentions: 3
Published: over 8 years ago

10.1111/jam.14751

Emerging salt marshes as a source of <i>Trichoderma arenarium</i> sp. nov. and other fungal <i>bio</i> effectors for <i>bio</i> saline agriculture
Cited by: 6
Author(s): Mingyue Ding, Wei Chen, Xingcong Ma, Bing‐Wei Lv, Siqi Jiang, Ya‐Nan Yu, Mohammad Javad Rahimi, Renwei Gao, Zheng Zhao, Feng Cai, Irina S. Druzhinina
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12870-015-0627-x

Transcriptomic comparison of the self-pollinated and cross-pollinated flowers of Erigeron breviscapus to analyze candidate self-incompatibility-associated genes
Cited by: 19
Author(s): Wei Zhang, Wei Xiang, Meng Heng-lin, Chunhua Ma, Ni-Hao Jiang, Guanghui Zhang, Shengchao Yang
Software Mentions: 3
Published: over 8 years ago

10.1111/mec.15224

Host hybridization as a potential mechanism of lateral symbiont transfer in deep‐sea vesicomyid clams
Cited by: 13
Author(s): Corinna Breusing, Shannon B. Johnson, Robert C. Vrijenhoek, Charles W. Young
Software Mentions: 3
Published: over 4 years ago

10.1111/zph.12827

Zoonotic <i>Bartonella</i> species in Eurasian wolves and other free‐ranging wild mammals from Italy
Cited by: 15
Author(s): Grazia Greco, Aya Attia Koraney Zarea, Giovanni Sgroi, Maria Tempesta, Nicola D’Alessio, Gianvito Lanave, Marcos Antônio Bezerra‐Santos, Roberta Iatta, Vincenzo Veneziano, Domenico Otranto, Bruno B Chomel
Software Mentions: 3
Published: about 3 years ago

10.3389/fninf.2018.00102

An Empirical Comparison of Meta- and Mega-Analysis With Data From the ENIGMA Obsessive-Compulsive Disorder Working Group
Cited by: 55
Author(s): Premika S.W. Boedhoe, Martijn W. Heymans, Lianne Schmaal, Yoshinari Abe, Pino Alonso, Stephanie H. Ameis, Alan Antičević, Paul Arnold, Marcelo C. Batistuzzo, Francesco Benedetti, Jan C. Beucke, Irene Bollettini, Anushree Bose, Silvia Brem, Anna Calvo, Rosa Calvo, Yuqi Cheng, Kang Ik Kevin Cho, Valentina Ciullo, Sara Dallaspezia, Damiaan Denys, Jamie D. Feusner, Kate D. Fitzgerald, Jean‐Paul Fouche, Egill A. Friðgeirsson, Patricia Gruner, Gregory L. Hanna, Derrek P. Hibar, Marcelo Q. Hoexter, Hao Hu, Chaim Huyser, Neda Jahanshad, Anthony James, Norbert Kathmann, Christian Kaufmann, Kathrin Koch, Jun Soo Kwon, Luisa Lázaro, Christine Löchner, Rachel Marsh, Ignacio Martínez‐Zalacaín, David Mataix–Cols, José M. Menchón, Luciano Minuzzi, Àstrid Morer, Takashi Nakamae, Tomohiro Nakao, Janardhanan C. Narayanaswamy, Seiji Nishida, Erika L. Nurmi, Joseph O’Neill, John Piacentini, Fabrizio Piras, Federica Piras, Y. C. Janardhan Reddy, Tim Jonas Reeß, Yuki Sakai, João Ricardo Sato, H. Blair Simpson, Noam Soreni, Carles Soriano‐Mas, Gianfranco Spalletta, Michael C. Stevens, Philip R. Szeszko, David F. Tolin, Guido van Wingen, Ganesan Venkatasubramanian, Susanne Walitza, Zhen Wang, Je-Yeon Yun, Enigma-Ocd Working-Group, Paul M. Thompson, Dan J. Stein, Odile A. van den Heuvel, Jos W. R. Twisk
Software Mentions: 3
Published: over 5 years ago

10.1111/1574-6941.12142

Spatial patterns of bacterial and archaeal communities along the Romanche Fracture Zone (tropical Atlantic)
Cited by: 14
Author(s): Itziar Lekunberri, Eva Sintes, Daniele De Corte, Taichi Yokokawa, Gerhard J. Herndl
Software Mentions: 3
Published: about 11 years ago

10.1111/j.1471-8286.2007.01670.x

Comprehensive DNA barcode coverage of North American birds
Cited by: 433
Author(s): Kevin C. R. Kerr, Mark Y. Stoeckle, Carla J. Dove, Lee A. Weigt, Charles M. Francis, Paul D. N. Hebert
Software Mentions: 3
Published: about 17 years ago

10.1002/2211-5463.12825

Serpin7 controls egg diapause of migratory locust (<i>Locusta migratoria</i>) by regulating polyphenol oxidase
Cited by: 8
Author(s): Jun Chen, Dongnan Cui, Hidayat Ullah, Kun Hao, Xiongbing Tu, Zehua Zhang
Software Mentions: 3
Published: about 4 years ago

10.1111/j.1365-294X.2010.04986.x

Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term geographic isolates
Cited by: 83
Author(s): Pauline Charruau, Carlos Fernandes, Pablo Orozco‐terWengel, Joris Peters, Luke Hunter, Hooshang Ziaie, Alireza Jourabchian, Houman Jowkar, George B. Schaller, Stéphane Ostrowski, Paul Vercammen, Thierry Grange, Christian Schlötterer, Antoinette Kotzé, Eva-María Geigl, Chris Walzer, Pamela A. Burger
Software Mentions: 3
Published: over 13 years ago

10.1002/ece3.4872

Genetic differentiation and asymmetric gene flow among Carpathian brown bear (<i>Ursus arctos</i>) populations—Implications for conservation of transboundary populations
Cited by: 11
Author(s): Maciej Matosiuk, Wojciech Śmietana, Magdalena Czajkowska, Ladislav Paule, Jozef Štofík, Diana Krajmerová, Andriy‐Taras Bashta, Stefan Jakimiuk, Mirosław Ratkiewicz
Software Mentions: 3
Published: over 5 years ago

10.1111/j.1365-2052.2010.02025.x

Genetic diversity within and among Atlantic cod (Gadus morhua) farmed in marine cages: a proof-of-concept study for the identification of escapees
Cited by: 31
Author(s): Kevin A. Glover, Geir Dahle, Jon‐Ivar Westgaard, Torild Johansen, Halvor Knutsen, Knut Eirik Jørstad
Software Mentions: 3
Published: over 13 years ago

10.1099/ijsem.0.002013

Saccharomyces jurei sp. nov., isolation and genetic identification of a novel yeast species from Quercus robur
Cited by: 59
Author(s): Samina Naseeb, Stephen A. James, Haya Alsammar, Christopher J. Michaels, Beatrice Gini, Carmen Nueno‐Palop, Christopher J. Bond, Henry A. McGhie, Ian N. Roberts, Daniela Delneri
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0060116

Insight into the Evolution of the Histidine Triad Protein (HTP) Family in Streptococcus
Cited by: 20
Author(s): Zhu‐Qing Shao, Yanmei Zhang, Xiuzhen Pan, Bin Wang, Jian-Qun Chen
Software Mentions: 3
Published: about 11 years ago

10.1099/ijsem.0.004742

Bradyrhizobium agreste sp. nov., Bradyrhizobium glycinis sp. nov. and Bradyrhizobium diversitatis sp. nov., isolated from a biodiversity hotspot of the genus Glycine in Western Australia
Cited by: 18
Author(s): Milena Serenato Klepa, Luisa Caroline Ferraz Helene, G.W. O’Hara, Mariángela Hungria
Software Mentions: 3
Published: almost 5 years ago

10.1099/jgv.0.000338

First complete genome sequence of European turkey coronavirus suggests complex recombination history related with US turkey and guinea fowl coronaviruses
Cited by: 31
Author(s): Paul A. Brown, Fabrice Touzain, François-Xavier Briand, A. M. Gouilh, Céline Courtillon, Chantal Allée, Evelyne Lemaitre, Claire de Boisséson, Yannick Blanchard, Nicolas Eterradossi
Software Mentions: 3
Published: over 8 years ago

10.1186/s12862-017-1001-4

Uncovering missing pieces: duplication and deletion history of arrestins in deuterostomes
Cited by: 38
Author(s): Henrike Indrischek, Sonja J. Prohaska, Vsevolod V. Gurevich, Eugenia V. Gurevich, Peter F. Stadler
Software Mentions: 3
Published: almost 7 years ago

10.1099/ijsem.0.001467

Apiotrichum terrigenum sp. nov., a soil-associated yeast found in both the UK and mainland Europe
Cited by: 11
Author(s): Stephen A. James, Christopher J. Bond, Rachael Stanley, R. Srinivasa Rao, Gábor Péter, Dénes Dlauchy, Ian N. Roberts
Software Mentions: 3
Published: over 7 years ago

10.1099/ijsem.0.002303

Lactococcus petauri sp. nov., isolated from an abscess of a sugar glider
Cited by: 30
Author(s): Laura B. Goodman, Marie R. Lawton, Rebecca J. Franklin‐Guild, Renee Anderson, Lynn Schaan, Anil J. Thachil, Martin Wiedmann, Claire B. Miller, Samuel D. Alcaine, Jasna Kovač
Software Mentions: 3
Published: over 6 years ago

10.1111/ppa.12789

Cassava brown streak disease in Rwanda, the associated viruses and disease phenotypes
Cited by: 21
Author(s): Esperance Munganyinka, Elijah Ateka, A W Kihurani, M.C. Kanyange, Fred Tairo, Peter Sseruwagi, Joseph Ndunguru
Software Mentions: 3
Published: over 6 years ago

10.1111/tpj.14417

Poplar carbohydrate‐active enzymes: whole‐genome annotation and functional analyses based on <scp>RNA</scp> expression data
Cited by: 29
Author(s): Vikash Kumar, Matthieu Hainaut, Nicolas Delhomme, Chanaka Mannapperuma, Peter Immerzeel, Nathaniel R. Street, Bernard Henrissat, Ewa J. Mellerowicz
Software Mentions: 3
Published: almost 5 years ago

10.1371/journal.pone.0161713

Multilocus Analyses Reveal Postglacial Demographic Shrinkage of Juniperus morrisonicola (Cupressaceae), a Dominant Alpine Species in Taiwan
Cited by: 7
Author(s): Chi‐Cheng Huang, Tsai Wen Hsu, Hao Ven Wang, Zin Huang Liu, Yi-Yen Chen, Chi Te Chiu, Chao Huang, Kuo Hsiang Hung, Tzen‐Yuh Chiang
Software Mentions: 3
Published: over 7 years ago

10.1099/jgv.0.000873

Proposed revision to the taxonomy of the genus Pestivirus, family Flaviviridae
Cited by: 241
Author(s): Donald B. Smith, Gregor Meyers, Jens Bukh, Ernest A. Gould, Thomas P. Monath, A. Scott Muerhoff, Alexander G. Pletnev, Rebeca Rico-Hesse, Jack T. Stapleton, Peter Simmonds, Paul Becher
Software Mentions: 3
Published: almost 7 years ago

10.1099/mic.0.027284-0

Population structure of Streptococcus oralis
Cited by: 56
Author(s): Thuy Do, Keith A. Jolley, Martin C. J. Maiden, Steven C. Gilbert, Douglas Clark, William Wade, David Beighton
Software Mentions: 2
Published: almost 15 years ago

10.1099/mic.0.055459-0

Ribosomal multilocus sequence typing: universal characterization of bacteria from domain to strain
Cited by: 431
Author(s): Keith A. Jolley, Carly M. Bliss, Julia S. Bennett, Holly B. Bratcher, Carina Brehony, Frances M. Colles, Helen Wimalarathna, Odile B. Harrison, Samuel K. Sheppard, Alison J. Cody, Martin C. J. Maiden
Software Mentions: 2
Published: about 12 years ago

10.1099/mgen.0.000198

Trends in fluoroquinolone resistance in Campylobacter
Cited by: 76
Author(s): E. L. Sproston, Helen M. L. Wimalarathna, Samuel K. Sheppard
Software Mentions: 2
Published: almost 6 years ago

10.3389/fphys.2016.00096

Characterization of a Digestive α-Amylase in the Midgut of Pieris brassicae L. (Lepidoptera: Pieridae)
Cited by: 12
Author(s): Ali Sharifloo, Arash Zibaee, Jalal Jalali Sendi, Khalil Talebi Jahroumi
Software Mentions: 2
Published: about 8 years ago

10.3390/antibiotics10030238

Identification of Escherichia coli and Related Enterobacteriaceae and Examination of Their Phenotypic Antimicrobial Resistance Patterns: A Pilot Study at A Wildlife–Livestock Interface in Lusaka, Zambia
Cited by: 7
Author(s): Emmanuel Kabali, G. S. Pandey, Musso Munyeme, Penjaninge Kapila, Andrew Nalishuwa Mukubesa, Joseph Ndebe, John Bwalya Muma, Charles Mubita, Walter Muleya, Elizabeth Muligisa Muonga, Shuya Mitoma, Bernard M. Hang’ombe, Anuwat Wiratsudakul, Mai Thi Ngan, Eslam Elhanafy, Hala El Daous, Nguyễn Thị Minh Huyền, Wataru Yamazaki, Tamaki Okabayashi, Maiku Abe, Junzo Norimine, Satoshi Sekiguchi
Software Mentions: 2
Published: about 3 years ago

10.1186/s12919-016-0026-9

On combining family- and population-based sequencing data
Cited by: 1
Author(s): Yuriko Katsumata, David W. Fardo
Software Mentions: 2
Published: over 7 years ago

10.3389/fgene.2021.640951

Explore the Underlying Mechanism Between Atopic Dermatitis and Major Depressive Disorder
Cited by: 2
Author(s): Tao Yang, Xuehua Huang, Jiajun Xu, Mingjing Situ, Qingqing Xiao, Kamil Can Kural, Yan Kang
Software Mentions: 2
Published: almost 3 years ago

10.1099/mgen.0.000208

Characterization of capsule genes in non-pathogenic Neisseria species
Cited by: 14
Author(s): Marianne E. A. Clemence, Martin Maiden, Odile B. Harrison
Software Mentions: 2
Published: over 5 years ago

10.1099/mgen.0.000495

Comparative genome analyses of Mycobacteroides immunogenum reveals two potential novel subspecies
Cited by: 1
Author(s): Siew Woh Choo, Shusruto Rishik, Wei Yee Wee
Software Mentions: 2
Published: over 3 years ago

10.3389/fmicb.2021.655057

The Packaging Regions of G1-Like PB2 Gene Contribute to Improving the Survival Advantage of Genotype S H9N2 Virus in China
Cited by: 1
Author(s): Xiuli Li, Zhao Ying, Shumiao Qiao, Minghong Gu, Ruyi Gao, Zhichuang Ge, Xiulong Xu, Xiaoquan Wang, Jing Ma, Jiao Hu, Shunlin Hu, Xiaowen Liu, Sujuan Chen, Daxin Peng, Xinan Jiao
Software Mentions: 2
Published: about 3 years ago

10.1111/j.1365-2958.2010.07442.x

An essential Aurora-related kinase transiently associates with spindle pole bodies during Plasmodium falciparum erythrocytic schizogony
Cited by: 67
Author(s): Luc Reininger, Jonathan M. Wilkes, Hélène Bourgade, Diego Miranda‐Saavedra, Christian Doerig
Software Mentions: 2
Published: over 13 years ago

10.1099/mgen.0.000043

Polysaccharide utilization loci and nutritional specialization in a dominant group of butyrate-producing human colonic Firmicutes
Cited by: 139
Author(s): Paul O. Sheridan, Jennifer C. Martin, Trevor D. Lawley, Hilary P. Browne, Hugh M. B. Harris, Annick Bernalier-Donadille, Sylvia H. Duncan, Paul W. O’Toole, Karen P. Scott, Harry J. Flint
Software Mentions: 2
Published: over 8 years ago

10.1111/mpp.12346

Identification of pathogenicity‐related genes in <i>Fusarium oxysporum</i> f. sp. <i>cepae</i>
Cited by: 91
Author(s): Andrew Taylor, Viktória Vágány, Alison C. Jackson, Richard J. Harrison, Alessandro Rainoni, John P. Clarkson
Software Mentions: 2
Published: about 8 years ago

10.1111/j.1574-6968.2008.01336.x

Evidence for recombination between a sialidase (<i>nanH</i>) of<i>Actinomyces naeslundii</i>and<i>Actinomyces oris</i>, previously named ‘<i>Actinomyces naeslundii</i>genospecies 1 and 2’
Cited by: 15
Author(s): Thuy Do, Uta Henßge, Steven C. Gilbert, Douglas Clark, David Beighton
Software Mentions: 2
Published: over 15 years ago

10.1002/2211-5463.12972

Recombinant transgelin‐like protein 1 fromMytilusshell induces formation of CaCO3polymorphic crystalsin vitro
Cited by: 1
Author(s): Yuting Jiang, Qi Sun, Meihua Fan, Jianyu He, Xiaolin Zhang, Hao Xu, Zhi Liao
Software Mentions: 2
Published: over 3 years ago

10.1111/j.1365-2052.2008.01848.x

Monophyletic origin of domestic bactrian camel (<i>Camelus bactrianus</i>) and its evolutionary relationship with the extant wild camel (<i>Camelus bactrianus ferus</i>)
Cited by: 86
Author(s): Rimutu Ji, Pin Cui, Feng Ding, Jian Guo Geng, Hongwei Gao, H. Zhang, Jie-Ying Yu, Shigang Hu, Hongzhe Meng
Software Mentions: 2
Published: almost 15 years ago

10.1002/2211-5463.12186

Premammalian origin of the sperm-specific Slo3 channel
Cited by: 9
Author(s): Alberto Vicens, Karla Andrade-López, Diego Cortez, Ranier Gutiérrez, Claudia L. Treviño
Software Mentions: 2
Published: over 7 years ago

10.1099/acmi.0.000166

Identification of a SARS-like bat coronavirus that shares structural features with the spike glycoprotein receptor-binding domain of SARS-CoV-2
Cited by: 6
Author(s): Conchita Fraguas Bringas, David Booth
Software Mentions: 2
Published: over 3 years ago

10.1099/mgen.0.000363

Analysis of the biodegradative and adaptive potential of the novel polychlorinated biphenyl degrader Rhodococcus sp. WAY2 revealed by its complete genome sequence
Cited by: 18
Author(s): Daniel Garrido‐Sanz, Paula Sansegundo‐Lobato, Miguel Redondo‐Nieto, Jáchym Šuman, Tomáš Cajthaml, Esther Blanco-Romero, Marta Martín, Ondřej Uhlík, Rafael Rivilla
Software Mentions: 2
Published: about 4 years ago

10.1111/mec.12162

Progressive genome‐wide introgression in agricultural <i>Campylobacter coli</i>
Cited by: 126
Author(s): Samuel K. Sheppard, Xavier Didelot, Keith A. Jolley, Aaron E. Darling, Ben Pascoe, Guillaume Méric, David J. Kelly, Alison J. Cody, Frances M. Colles, Norval James Colin Strachan, I.D. Ogden, Ken J. Forbes, Nigel P. French, Philip Carter, William G. Miller, Noel D. McCarthy, Robert J. Owen, Eva Litrup, Michael Egholm, Jason P. Affourtit, Stephen D. Bentley, Julian Parkhill, Martin C. J. Maiden, Daniel Falush
Software Mentions: 2
Published: over 11 years ago

10.1099/mgen.0.000036

Recombination-mediated remodelling of host–pathogen interactions during Staphylococcus aureus niche adaptation
Cited by: 31
Author(s): Laura E. Spoor, Emily J. Richardson, Amy C. Richards, Gillian J. Wilson, Chriselle Mendonca, Ravi Gupta, Paul R. McAdam, Stephen W. Tuffs, Nikki S. Black, James P. O’Gara, Chia Y. Lee, Jukka Corander, J. Ross Fitzgerald
Software Mentions: 2
Published: over 8 years ago

10.1111/1755-0998.12236

Next‐generation<scp>DNA</scp>barcoding: using next‐generation sequencing to enhance and accelerate<scp>DNA</scp>barcode capture from single specimens
Cited by: 178
Author(s): Shadi Shokralla, Joel F. Gibson, Hamid Nikbakht, Daniel H. Janzen, Winnie Hallwachs, Mehrdad Hajibabaei
Software Mentions: 2
Published: about 10 years ago

10.1099/mgen.0.000196

Genetic diversity, mobilisation and spread of the yersiniabactin-encoding mobile element ICEKp in Klebsiella pneumoniae populations
Cited by: 162
Author(s): Margaret M C Lam, Ryan R. Wick, Kelly L. Wyres, Claire L. Gorrie, Louise M. Judd, Adam Jenney, Sylvain Brisse, Kathryn E. Holt
Software Mentions: 2
Published: over 5 years ago

10.1186/1471-2148-9-37

Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches
Cited by: 239
Author(s): Stephen A. Smith, Jeremy M. Beaulieu, Michael J. Donoghue
Software Mentions: 2
Published: over 15 years ago

10.1002/1873-3468.12250

A β‐mannan utilization locus in <i>Bacteroides ovatus</i> involves a GH36 α‐galactosidase active on galactomannans
Cited by: 38
Author(s): Sumitha K. Reddy, Viktoria Bågenholm, Nicholas A. Pudlo, Hanene Bouraoui, Nicole M. Koropatkin, Eric C. Martens, Henrik Stålbrand
Software Mentions: 2
Published: almost 8 years ago

10.1002/2211-5463.12804

Comparative and evolutionary analyses of the divergence of plant oligosaccharyltransferase STT3 isoforms
Cited by: 4
Author(s): Guanting Niu, Zhu‐Qing Shao, Chuanfa Liu, Tianshu Chen, Qingsong Jiao, Zhi Hong
Software Mentions: 2
Published: about 4 years ago

10.1080/23802359.2019.1692719

The mitochondrial genome of a wild toxic mushroom, Russula subnigricans
Cited by: 1
Author(s): Fei Yu, Yongjie Zhang, Jiankun Liang
Software Mentions: 2
Published: almost 5 years ago

10.1111/1751-7915.12145

Colonization by endophytic <scp><i>O</i></scp><i>chrobactrum anthropi</i> <scp>M</scp>n1 promotes growth of <scp>J</scp>erusalem artichoke
Cited by: 22
Author(s): Xianmin Meng, Dekai Yan, Xiaohua Long, Changhai Wang, Zhaopu Liu, Zed Rengel
Software Mentions: 2
Published: almost 10 years ago

10.1002/ece3.6566

Does color matter? Molecular and ecological divergence in four sympatric color morphs of a coral reef fish
Cited by: 6
Author(s): Michelle R. Gaither, Darren J. Coker, Samuel E. Greaves, Fatih Sarigol, Samuel D. Payet, Veronica Chaidez, Tane H. Sinclair‐Taylor, Joseph D. DiBattista, Michael L. Berumen
Software Mentions: 2
Published: over 3 years ago