Ecosyste.ms: Papers

10.1371/journal.pone.0029018

Python as a Federation Tool for GENESIS 3.0
Cited by: 26
Author(s): Hugo Cornelis, Antony Rodríguez, Allan D Coop, James M. Bower
Software Mentions: 10
Published: almost 13 years ago

10.3390/s21134510

A Comprehensive Overview of TCP Congestion Control in 5G Networks: Research Challenges and Future Perspectives
Cited by: 13
Author(s): Josip Lörincz, Zvonimir Klarin, Julije Ožegović
Software Mentions: 6
Published: over 3 years ago

10.1534/g3.119.400273

DPAC: A Tool for Differential Poly(A)–Cluster Usage from Poly(A)–Targeted RNAseq Data
Cited by: 16
Author(s): Andrew Routh
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-017-17407-w

Activity-Dependent Regulation of Alternative Cleavage and Polyadenylation During Hippocampal Long-Term Potentiation
Cited by: 37
Author(s): Mariana Fontes, Ayşegül Güvenek, Riki Kawaguchi, Dinghai Zheng, Alden Huang, Victoria M. Ho, Patrick B. Chen, Xiaochuan Liu, Thomas J. O’Dell, Giovanni Coppola, Bin Tian, Kelsey C. Martin
Software Mentions: 6
Published: almost 7 years ago

10.3389/fgene.2016.00183

Large Scale Gene Expression Meta-Analysis Reveals Tissue-Specific, Sex-Biased Gene Expression in Humans
Cited by: 78
Author(s): Benjamin Mayne, Tina Bianco‐Miotto, Sam Buckberry, James Breen, Vicki L. Clifton, Cheryl Shoubridge, Claire T. Roberts
Software Mentions: 6
Published: about 8 years ago

10.1089/ast.2018.1912

Assessing the Acceptability of Science Operations Concepts and the Level of Mission Enhancement of Capabilities for Human Mars Exploration Extravehicular Activity
Cited by: 11
Author(s): K. Beaton, Steven P. Chappell, Andrew F. J. Abercromby, Matthew J. Miller, S. E. Kobs Nawotniak, A. L. Brady, Adam H. Stevens, Samuel J. Payler, S. S. Hughes, D. S. S. Lim
Software Mentions: 5
Published: over 5 years ago

10.1186/s12864-015-1374-y

Sequencing, identification and mapping of primed L1 elements (SIMPLE) reveals significant variation in full length L1 elements between individuals
Cited by: 29
Author(s): Vincent A. Streva, Vallmer E Jordan, Sara B. Linker, Dale J. Hedges, Prescott L. Deininger
Software Mentions: 4
Published: over 9 years ago

10.3390/s21113600

Development and Validation of an ISA100.11a Simulation Model for Accurate Industrial WSN Planning and Deployment
Cited by: 1
Author(s): Zoltan Padrah, Andra Pastrav, Tudor Palade, Ovidiu Ratiu, Emanuel Puşchiţă
Software Mentions: 4
Published: over 3 years ago

10.3390/s19081933

A Review of Remote Sensing Approaches for Monitoring Blue Carbon Ecosystems: Mangroves, Seagrassesand Salt Marshes during 2010–2018
Cited by: 83
Author(s): Tien Dat Pham, Junshi Xia, Nam Thang Ha, Dieu Tien Bui, Nga Nhu Le, Wataru Tekeuchi
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1000832

U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line
Cited by: 238
Author(s): Michael J. Clark, Nils Homer, Brian D. O’Connor, Zugen Chen, Ascia Eskin, Hane Lee, Barry Merriman, Stanley F. Nelson
Software Mentions: 4
Published: almost 15 years ago

10.1186/s12864-018-5393-3

A comparison between whole transcript and 3’ RNA sequencing methods using Kapa and Lexogen library preparation methods
Cited by: 55
Author(s): Feiyang Ma, Brie K. Fuqua, Yehudit Hasin, Clara Yukhtman, Chris D. Vulpe, Aldons J. Lusis, Matteo Pellegrini
Software Mentions: 4
Published: almost 6 years ago

10.3390/s20247289

On the Fidelity of NS-3 Simulations of Wireless Multipath TCP Connections
Cited by: 3
Author(s): Monika Prakash, Atef Abdrabou
Software Mentions: 4
Published: almost 4 years ago

10.3389/fmicb.2020.01725

Phylogenetic Relationships and Potential Functional Attributes of the Genus Parapedobacter: A Member of Family Sphingobacteriaceae
Cited by: 5
Author(s): Shekhar Nagar, Chandni Talwar, Shazia Haider, Akshita Puri, Kalaiarasan Ponnusamy, Madhuri Gupta, Utkarsh Sood, Abhay Bajaj, Rup Lal, Roshan Kumar
Software Mentions: 4
Published: about 4 years ago

10.3389/fmicb.2020.01979

Genomic Comparison and Spatial Distribution of Different Synechococcus Phylotypes in the Black Sea
Cited by: 11
Author(s): Andrea Di Cesare, Nina Dzhembekova, Pedro J. Cabello‐Yeves, Ester M. Eckert, Violeta Slabakova, Nataliya Slabakova, Elisaveta Peneva, Roberto Bertoni, Gianluca Corno, Michaela M. Salcher, Lyudmila Kamburska, Filippo Bertoni, Francisco Rodrı́guez-Valera, Snejana Moncheva, Cristiana Callieri
Software Mentions: 4
Published: about 4 years ago

10.3390/s21020430

WSN-SES/MB: System Entity Structure and Model Base Framework for Large-Scale Wireless Sensor Networks
Cited by: 6
Author(s): Su Man Nam, Hyung Jong Kim
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0069446

Embedding and Publishing Interactive, 3-Dimensional, Scientific Figures in Portable Document Format (PDF) Files
Cited by: 74
Author(s): David G. Barnes, Michail Vidiassov, Bernhard Ruthensteiner, C. J. Fluke, Michelle R. Quayle, Colin R. McHenry
Software Mentions: 3
Published: about 11 years ago

10.3390/s20113061

Performance of LoRaWAN for Handling Telemetry and Alarm Messages in Industrial Applications
Cited by: 10
Author(s): Francisco Helder C. dos S. Filho, Plínio S. Dester, Elvis M. G. Stancanelli, Paulo Cardieri, Pedro H. J. Nardelli, Dick Carrillo, Hirley Alves
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0241212

Insights into the genetic diversity, recombination, and systemic infections with evidence of intracellular maturation of hepadnavirus in cats
Cited by: 29
Author(s): Chutchai Piewbang, Sabrina Wahyu Wardhani, Surangkanang Chaiyasak, Jakarwan Yostawonkul, Poowadon Chai‐in, Suwimon Boonrungsiman, Tanit Kasantikul, Somporn Techangamsuwan
Software Mentions: 3
Published: about 4 years ago

10.3390/ijms22073393

MIAT Is an Upstream Regulator of NMYC and the Disruption of the MIAT/NMYC Axis Induces Cell Death in NMYC Amplified Neuroblastoma Cell Lines
Cited by: 5
Author(s): Barbara Feriančiková, Tereza Feglarová, Lenka Krsková, Tomáš Eckschlager, Aleš Vícha, Jan Hraběta
Software Mentions: 3
Published: over 3 years ago

10.1002/hbm.25159

Direct cortical thickness estimation using deep learning‐based anatomy segmentation and cortex parcellation
Cited by: 32
Author(s): Michael Rebsamen, Christian Rummel, Mauricio Reyes, Roland Wiest, Richard McKinley
Software Mentions: 3
Published: about 4 years ago

10.3390/s150304677

Symphony: A Framework for Accurate and Holistic WSN Simulation
Cited by: 4
Author(s): Laurynas Riliskis, Evgeny Osipov
Software Mentions: 3
Published: over 9 years ago

10.3389/fmicb.2019.00443

Comparative Genome and Transcriptome Study of the Gene Expression Difference Between Pathogenic and Environmental Strains of Prototheca zopfii
Cited by: 14
Author(s): Xuanhao Zeng, Timothy Kudinha, Fanrong Kong, Qiang Qiang Zhang
Software Mentions: 3
Published: over 5 years ago

10.1016/j.celrep.2020.108108

Malic Enzyme Couples Mitochondria with Aerobic Glycolysis in Osteoblasts
Cited by: 69
Author(s): Wen‐Chih Lee, Xing Ji, Itzhak Nissim, Fanxin Long
Software Mentions: 3
Published: about 4 years ago

10.1038/s41597-020-00667-z

Question-driven summarization of answers to consumer health questions
Cited by: 31
Author(s): Max E. Savery, Asma Ben Abacha, Soumya Gayen, Dina Demner‐Fushman
Software Mentions: 3
Published: about 4 years ago

10.3390/s140305392

Maestro: An Orchestration Framework for Large-Scale WSN Simulations
Cited by: 3
Author(s): Laurynas Riliskis, Evgeny Osipov
Software Mentions: 3
Published: over 10 years ago

10.1042/BSR20201087

Identification of an extracellular vesicle-related gene signature in the prediction of pancreatic cancer clinical prognosis
Cited by: 9
Author(s): Dafeng Xu, Yu Wang, Kailun Zhou, Junzhen Wu, Zhensheng Zhang, Jiachao Zhang, Zhiwei Yu, Luzheng Liu, Xiangmei Liu, Bidan Li, Jinfang Zheng
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12864-020-6478-3

3’Pool-seq: an optimized cost-efficient and scalable method of whole-transcriptome gene expression profiling
Cited by: 12
Author(s): Gabriel Sholder, Thomas A. Lanz, Robert Moccia, Jie Quan, Estel Aparicio-Prat, Robert V. Stanton, Hualin Simon Xi
Software Mentions: 3
Published: almost 5 years ago

10.1186/s13018-015-0154-3

Three-column osteotomy surgery versus standard surgical management for the correction of adult spinal deformity: a cohort study
Cited by: 8
Author(s): Xinran Ji, Hua Chen, Shujun Zhang, Lihai Zhang, Wei Zhang, Sigurd Berven, Peifu Tang
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0119118

Transcriptomic Analysis of the Underground Renewal Buds during Dormancy Transition and Release in ‘Hangbaishao’ Peony (Paeonia lactiflora)
Cited by: 15
Author(s): Jiaping Zhang, Yun Wu, Danqing Li, Guanqun Wang, Xin Li
Software Mentions: 2
Published: over 9 years ago

10.3390/s130506295

WEAMR — A Weighted Energy Aware Multipath Reliable Routing Mechanism for Hotline-Based WSNs
Cited by: 7
Author(s): Ali Tufail, Arslan Qamar, Adil Khan, Waleed Akram Baig, Ki-Hyung Kim
Software Mentions: 2
Published: over 11 years ago

10.3390/s130607454

A Proposal for Modeling Real Hardware, Weather and Marine Conditions for Underwater Sensor Networks
Cited by: 4
Author(s): Salvador Climent, J.V. Capella, Sara Clavero, Ángel Perles, Juan José Serrano
Software Mentions: 2
Published: over 11 years ago

10.3390/s151025176

A Context-Aware Model to Provide Positioning in Disaster Relief Scenarios
Cited by: 2
Author(s): Daniel Reinoso Moreno, Sergio F. Ochoa, Roc Meseguer
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0190222

Computational fluid dynamics (CFD) using porous media modeling predicts recurrence after coiling of cerebral aneurysms
Cited by: 32
Author(s): Yohtaro Umeda, Fujimaro Ishida, Motomu Tsuji, Kazuhiro Furukawa, Masato Shiba, Ryuta Yasuda, Naoki Toma, Hiroshi Sakaida, Hiroyoshi Suzuki
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0038413

Preserved Self-Awareness following Extensive Bilateral Brain Damage to the Insula, Anterior Cingulate, and Medial Prefrontal Cortices
Cited by: 99
Author(s): Carissa L. Philippi, Justin S. Feinstein, Sahib S. Khalsa, António R. Damásio, Daniel Tranel, Gregory Landini, Kenneth Williford, David Rudrauf
Software Mentions: 2
Published: about 12 years ago

10.3390/s18030907

How to Improve Fault Tolerance in Disaster Predictions: A Case Study about Flash Floods Using IoT, ML and Real Data
Cited by: 34
Author(s): Gustavo Furquim, Geraldo P. Rocha Filho, Roozbeh Jalali, Gustavo Pessin, Richard W. Pazzi, Jó Ueyama
Software Mentions: 2
Published: over 6 years ago

10.3390/insects12030233

Application of Remote Sensing Data for Locust Research and Management—A Review
Cited by: 28
Author(s): Igor Klein, Natascha Oppelt, Claudia Kuenzer
Software Mentions: 2
Published: over 3 years ago

10.3390/s19030550

A 5G V2X Ecosystem Providing Internet of Vehicles
Cited by: 99
Author(s): Carlos Renato Storck, Fátima de L. P. Duarte-Figueiredo
Software Mentions: 2
Published: almost 6 years ago

10.3390/s19132888

Using Linguistic Properties of Place Specification for Network Naming to Improve Mobility Performance
Cited by: 2
Author(s): Jairo E. Lopez, Quang Ngọc Nguyễn, Wen Zheng, Keping Yu, Toru Sato
Software Mentions: 2
Published: over 5 years ago

10.1002/acm2.12489

A dosimetric study on the use of 3D-printed customized boluses in photon therapy: A hydrogel and silica gel study
Cited by: 21
Author(s): Yuehong Kong, Tengfei Yan, Yubing Sun, Jianjun Qian, Gang Zhou, Shang Cai, Ye Tian
Software Mentions: 2
Published: almost 6 years ago

10.3390/s20051407

Event-Driven Data Gathering in Pure Asynchronous Multi-Hop Underwater Acoustic Sensor Networks
Cited by: 4
Author(s): Sara Clavero
Software Mentions: 2
Published: over 4 years ago

10.3390/s20185044

A Survey on Adaptive Data Rate Optimization in LoRaWAN: Recent Solutions and Major Challenges
Cited by: 86
Author(s): Rachel Kufakunesu, Gerhard P. Hancke, Adnan M. Abu‐Mahfouz
Software Mentions: 2
Published: about 4 years ago

10.1186/s12864-018-4903-7

Recurrent tumor-specific regulation of alternative polyadenylation of cancer-related genes
Cited by: 20
Author(s): Zhen‐Zhen Xue, René L. Warren, Ewan A. Gibb, Daniel MacMillan, Johnathan Wong, Readman Chiu, S. Austin Hammond, Chen Yang, Ka Ming Nip, Catherine A. Ennis, Abigail Hahn, Sheila M. Reynolds, İnanç Birol
Software Mentions: 2
Published: over 6 years ago

10.3390/s21072485

A Comprehensive Open-Source Simulation Framework for LiFi Communication
Cited by: 11
Author(s): Shakir Ullah, Saeed Ur Rehman, Peter Han Joo Chong
Software Mentions: 2
Published: over 3 years ago

10.3390/s21175737

Even Lower Latency in IIoT: Evaluation of QUIC in Industrial IoT Scenarios
Cited by: 6
Author(s): Fátima Fernández, Mihail Zverev, Pablo Garrido, J. R. Juárez, Josu Bilbao, Ramón Agüero
Software Mentions: 2
Published: about 3 years ago

10.1128/mSystems.00020-17

Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus <i>Novosphingobium</i>
Cited by: 45
Author(s): Roshan Kumar, Helianthous Verma, Shazia Haider, Abhay Bajaj, Utkarsh Sood, Kalaiarasan Ponnusamy, Shekhar Nagar, Mallikarjun Shakarad, Ram Krishan Negi, Yogendra Singh, Jitendra P. Khurana, Jack A. Gilbert, Rup Lal
Software Mentions: 2
Published: over 7 years ago

10.3390/ijerph17114007

An NS-3 Implementation and Experimental Performance Analysis of IEEE 802.15.6 Standard under Different Deployment Scenarios
Cited by: 12
Author(s): Beom-Su Kim, Tae-Eung Sung, Ki-Il Kim
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0126049

Bias in Ligation-Based Small RNA Sequencing Library Construction Is Determined by Adaptor and RNA Structure
Cited by: 138
Author(s): Ryan T. Fuchs, Zhiyi Sun, Fanglei Zhuang, G. Brett Robb
Software Mentions: 2
Published: over 9 years ago

10.1194/jlr.RA120000713

Gene networks and pathways for plasma lipid traits via multitissue multiomics systems analysis
Cited by: 7
Author(s): Montgomery Blencowe, In Sook Ahn, Zara Saleem, Helen Luk, Ingrid Cely, Ville Mäkinen, Yuqi Zhao, Xia Yang
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep20280

A semi-automatic computer-aided method for surgical template design
Cited by: 22
Author(s): Xiaojun Chen, Liang Xu, Yue Yang, Jan Egger
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-018-37173-7

Rosemary (Rosmarinus officinalis) extract causes ROS-induced necrotic cell death and inhibits tumor growth in vivo
Cited by: 46
Author(s): Almudena Pérez-Sánchez, Enrique Barrajón‐Catalán, Verónica Ruiz-Torres, Luz Agulló-Chazarra, María Herranz-López, Alberto Valdés, Alejandro Cifuentes, Vicente Micol
Software Mentions: 2
Published: almost 6 years ago

10.7717/peerj.5052

A new, three-dimensional geometric morphometric approach to assess egg shape
Cited by: 13
Author(s): Marie R. G. Attard, Emma Sherratt, Paul G. McDonald, Iain M. Young, Marta Vidal‐García, Stephen Wroe
Software Mentions: 2
Published: over 6 years ago

10.1186/s13072-019-0300-y

TH2BS11ph histone mark is enriched in the unsynapsed axes of the XY body and predominantly associates with H3K4me3-containing genomic regions in mammalian spermatocytes
Cited by: 4
Author(s): Iyer Aditya Mahadevan, Satyakrishna Pentakota, Raktim Roy, Utsa Bhaduri, Rao M
Software Mentions: 2
Published: about 5 years ago

10.1186/s12859-021-04349-4

RPocket: an intuitive database of RNA pocket topology information with RNA-ligand data resources
Cited by: 11
Author(s): Ting Zhou, Huiwen Wang, Chen Zeng, Yunjie Zhao
Software Mentions: 2
Published: about 3 years ago

10.1155/2019/5109285

Development of a Three-Dimensional Finite Element Model of Thoracolumbar Kyphotic Deformity following Vertebral Column Decancellation
Cited by: 9
Author(s): Tianhao Wang, Zhihua Cai, Yongfei Zhao, Guoyan Zheng, Wei Wang, Dengbin Qi, Diyu Song, Yan Wang
Software Mentions: 1
Published: over 5 years ago

10.1186/1472-6963-14-462

Pharmaceutical cost management in an ambulatory setting using a risk adjustment tool
Cited by: 12
Author(s): David Vivas-Consuelo, Ruth Usó-Talamantes, M. Natividad Guadalajara Olmeda, José-Luis Trillo-Mata, Carla Sancho-Mestre, Laia Buigues-Pastor
Software Mentions: 1
Published: about 10 years ago

10.1186/1755-8794-8-S2-S15

Parallelization of enumerating tree-like chemical compounds by breadth-first search order
Cited by: 2
Author(s): Morihiro Hayashida, Jira Jindalertudomdee, Yang Zhao, Tatsuya Akutsu
Software Mentions: 1
Published: over 9 years ago

10.1186/1471-2474-13-84

Embracing additive manufacture: implications for foot and ankle orthosis design
Cited by: 98
Author(s): Scott Telfer, Jari Pallari, Javier Munguia, Kenny Dalgarno, Martin McGeough, James Woodburn
Software Mentions: 1
Published: over 12 years ago

10.1186/s12891-020-03212-6

Reverse wedge effect following intramedullary nailing of a basicervical trochanteric fracture variant combined with a mechanically compromised greater trochanter
Cited by: 7
Author(s): Yu Zhang, Jun Hu, Xiang Li
Software Mentions: 1
Published: over 4 years ago

10.1186/s12891-015-0530-5

Comparison of microstructural and mechanical properties of trabeculae in femoral head from osteoporosis patients with and without cartilage lesions: a case–control study
Cited by: 9
Author(s): Houchen Lv, Licheng Zhang, Fei Yang, Zhe Zhao, Yanfei Qi, Lihai Zhang, Peifu Tang
Software Mentions: 1
Published: over 9 years ago

10.1186/s12891-020-03465-1

A 3D-printed, personalized, biomechanics-specific beta-tricalcium phosphate bioceramic rod system: personalized treatment strategy for patients with femoral shaft non-union based on finite element analysis
Cited by: 2
Author(s): Jian Lu, Qiyang Wang, Jiagen Sheng, Sheng Guo, Shi‐Cong Tao
Software Mentions: 1
Published: over 4 years ago

10.1186/s12883-021-02251-3

Wall shear stress gradient is independently associated with middle cerebral artery aneurysm development: a case-control CFD patient-specific study based on 77 patients
Cited by: 8
Author(s): Mikołaj Zimny, E. Kawlewska, Anna Hebda, W. Wolański, Piotr Ładziński, Wojciech Kaspera
Software Mentions: 1
Published: over 3 years ago

10.1136/bmjresp-2017-000264

Effect of idiopathic thoracic scoliosis on the tracheobronchial tree
Cited by: 17
Author(s): James J. Farrell, Enrique Garrido
Software Mentions: 1
Published: over 6 years ago

10.1007/s10237-019-01257-8

Statistical shape modelling of the first carpometacarpal joint reveals high variation in morphology
Cited by: 11
Author(s): W. M. R. Rusli, Angela E. Kedgley
Software Mentions: 1
Published: almost 5 years ago

10.1155/2018/1271762

Optimum Configuration of Cannulated Compression Screws for the Fixation of Unstable Femoral Neck Fractures: Finite Element Analysis Evaluation
Cited by: 23
Author(s): Jiantao Li, Menglin Wang, Jianfeng Zhou, Lin Han, Hao Zhang, Chen Li, Lianting Li, Ming Hao
Software Mentions: 1
Published: almost 6 years ago

10.1093/brain/awab033

Cortical involvement determines impairment 30 years after a clinically isolated syndrome
Cited by: 18
Author(s): Lukas Haider, Ferrán Prados, Karen Chung, Olivia Goodkin, Baris Kanber, Carole H. Sudre, Marios C. Yiannakas, R Samson, Stephanie Mangesius, Alan J. Thompson, C Wheeler-Kingshott, Olga Ciccarelli, Declan Chard, Frederik Barkhof
Software Mentions: 1
Published: over 3 years ago

10.5830/CVJA-2012-044

Doppler echocardiographic indices in aortic coarctation : a comparison of profiles before and after stenting : cardiovascular topic
Cited by: 6
Author(s): Shokoufeh Hajsadeghi, Seyed‐Mohammad Fereshtehnejad, M Ojaghi, Hossein Ali Bassiri, Mohammad Reza Keramati, Mitra Chitsazan, Somayeh Gholami
Software Mentions: 1
Published: about 12 years ago

10.3390/ma14164631

A Retrospective Study on the Transferring Accuracy of a Fully Guided Digital Template in the Anterior Zone
Cited by: 1
Author(s): Lirong Huang, Xiaoqing Zhang, Anchun Mo
Software Mentions: 1
Published: about 3 years ago

10.1038/s41385-019-0245-2

A combination of LCPUFA ameliorates airway inflammation in asthmatic mice by promoting pro-resolving effects and reducing adverse effects of EPA
Cited by: 19
Author(s): Daniela Fußbroich, Romain A. Colas, Olaf Eickmeier, Jordis Trischler, Silvija‐Pera Jerkic, Kurt Zimmermann, A. Göpel, T. Schwenger, Alexander Schaible, Dirk Henrich, Patrick C. Baer, Stefan Zielen, Jesmond Dalli, Christopher Beermann, Ralf Schubert
Software Mentions: 1
Published: over 4 years ago

10.7717/peerj.5779

Cancellous bone and theropod dinosaur locomotion. Part II—a new approach to inferring posture and locomotor biomechanics in extinct tetrapod vertebrates
Cited by: 19
Author(s): Peter J. Bishop, Scott Hocknull, Christofer J. Clemente, John R. Hutchinson, Rod Barrett, David G. Lloyd
Software Mentions: 1
Published: about 6 years ago

10.7717/peerj.7577

Testing the function of dromaeosaurid (Dinosauria, Theropoda) ‘sickle claws’ through musculoskeletal modelling and optimization
Cited by: 5
Author(s): Peter J. Bishop
Software Mentions: 1
Published: about 5 years ago

10.3390/plants9081010

The Application of a Commercially Available Citrus-Based Extract Mitigates Moderate NaCl-Stress in Arabidopsis thaliana Plants
Cited by: 7
Author(s): Johannes Loubser, P.N. Hills
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pbio.1002537

Epithelial Tumors Originate in Tumor Hotspots, a Tissue-Intrinsic Microenvironment
Cited by: 68
Author(s): Yoichiro Tamori, Emiko Suzuki, Wu-Min Deng
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0182029

The remnant of the European rabbit (Oryctolagus cuniculus) IgD gene
Cited by: 4
Author(s): Dennis Lanning, Pedro J. Esteves, Katherine L. Knight
Software Mentions: 1
Published: about 7 years ago

10.1371/journal.pone.0149968

Internal Variability-Generated Uncertainty in East Asian Climate Projections Estimated with 40 CCSM3 Ensembles
Cited by: 6
Author(s): Shuai‐Lei Yao, Jing‐Jia Luo, Gang Huang
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0218049

Targeting DNA-dependent protein kinase sensitizes hepatocellular carcinoma cells to proton beam irradiation through apoptosis induction
Cited by: 13
Author(s): Changhoon Choi, Arang Son, Ga Haeng Lee, Sung Won Shin, Sohee Park, Sang Hee Ahn, Yoonsun Chung, Jeong Ii Yu, Hee Chul Park
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0254380

Mapping Arctic cetaceans from space: A case study for beluga and narwhal
Cited by: 13
Author(s): Bertrand Charry, Emily Tissier, John Iacozza, Marianne Marcoux, Cortney A. Watt
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pone.0193663

Foveal light and dark adaptation in patients with glaucoma and healthy subjects: A case-control study
Cited by: 11
Author(s): Ronald A. J. M. Bierings, M. J. Kuiper, Casper M. van Berkel, Tom Overkempe, Nomdo M. Jansonius
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0214460

Design and basic research on accuracy of a novel individualized three-dimensional printed navigation template in atlantoaxial pedicle screw placement
Cited by: 11
Author(s): Xiaolong Chen, Yafen Xie, Jianxin Li, Wu Wu, Guannan Li, Huijing Hu, Xiaoyun Wang, Zhaojian Meng, Yihui Wen, Wenhua Huang
Software Mentions: 1
Published: over 5 years ago

10.1038/s41419-021-03431-2

Gasdermin E deficiency attenuates acute kidney injury by inhibiting pyroptosis and inflammation
Cited by: 63
Author(s): Weiwei Xia, Yuanyuan Li, Mengying Wu, Qianqian Jin, Qian Wang, Shuzhen Li, Songming Huang, Aihua Zhang, Yue Zhang, Zhanjun Jia
Software Mentions: 1
Published: almost 4 years ago

10.1007/s00018-014-1637-9

RNA sequencing: from tag-based profiling to resolving complete transcript structure
Cited by: 31
Author(s): Eleonora de Klerk, Johan T. den Dunnen, Peter A.C. ’t Hoen
Software Mentions: 1
Published: over 10 years ago

10.1002/chem.201903606

Potential Precursors for Terminal Methylidene Rare‐Earth‐Metal Complexes Supported by a Superbulky Tris(pyrazolyl)borato Ligand
Cited by: 6
Author(s): Verena M. Birkelbach, Renita Thim, Christoph Stuhl, Cäcilia Maichle‐Mößmer, Reiner Anwander
Software Mentions: 1
Published: about 5 years ago

10.1002/cre2.397

Validation of a novel method for canine eruption assessment in unilateral cleft lip and palate patients
Cited by: 3
Author(s): Khalid Alqahtani, Eman Shaheen, Sohaib Shujaat, Mostafa EzEldeen, Titiaan Dormaar, María Cadenas de Llano-Pérula, Constantinus Politis, Reinhilde Jacobs
Software Mentions: 1
Published: almost 4 years ago

10.7759/cureus.16235

Determination of the Gender-Related Differences on Native Femoral Anatomy Using Three-Dimensional Computerized Tomography Models in Caucasian Population
Cited by: 3
Author(s): Oğuzhan Tanoğlu
Software Mentions: 1
Published: over 3 years ago

10.3390/dj8030079

Comparative Evaluation of Digitization of Diagnostic Dental Cast (Plaster) Models Using Different Scanning Technologies
Cited by: 11
Author(s): Aalaa Emara, Neha Sharma, Florian S. Halbeisen, Bilal Msallem, Florian M. Thieringer
Software Mentions: 1
Published: over 4 years ago

10.1002/ece3.2585

Wind estimation based on thermal soaring of birds
Cited by: 29
Author(s): Rolf Weinzierl, Gil Bohrer, Bart Kranstauber, Wolfgang Fiedler, Martin Wikelski, Andrea Flack
Software Mentions: 1
Published: almost 8 years ago

10.1002/ecy.2656

Investigating old‐growth ponderosa pine physiology using tree‐rings, δ¹³C, δ¹⁸O, and a process‐based model
Cited by: 11
Author(s): Danielle Ulrich, Christopher J. Still, J. Renée Brooks, Young-il Kim, Frederick C. Meinzer
Software Mentions: 1
Published: over 5 years ago

10.3389/fcimb.2020.00488

Infection by the Protozoan Parasite Toxoplasma gondii Inhibits Host MNK1/2-eIF4E Axis to Promote Its Survival
Cited by: 2
Author(s): Louis‐Philippe Leroux, Visnú Chaparro, Maritza Jaramillo
Software Mentions: 1
Published: about 4 years ago

10.3389/fneur.2017.00131

Online Measurement of Microembolic Signal Burden by Transcranial Doppler during Catheter Ablation for Atrial Fibrillation—Results of a Multicenter Trial
Cited by: 7
Author(s): Christian von Bary, Thomas Deneke, Thomas Arentz, Anja Schade, Heiko Lehrmann, Sabine Fredersdorf, Dobri Baldaranov, Lars S. Maier, Felix Schlachetzki
Software Mentions: 1
Published: over 7 years ago

10.3389/fphar.2015.00189

Advances in optical imaging for pharmacological studies
Cited by: 48
Author(s): Alicia Arranz, Jorge Ripoll
Software Mentions: 1
Published: about 9 years ago

10.1534/g3.118.200194

Mean-Variance QTL Mapping Identifies Novel QTL for Circadian Activity and Exploratory Behavior in Mice
Cited by: 9
Author(s): Robert W. Corty, Vivek Kumar, Lisa M. Tarantino, Joseph S. Takahashi, William Valdar
Software Mentions: 1
Published: almost 6 years ago

10.1111/gcb.15011

Assessing the response of forest productivity to climate extremes in Switzerland using model–data fusion
Cited by: 50
Author(s): Volodymyr Trotsiuk, Florian Härtig, Maxime Cailleret, Flurin Babst, David I. Forrester, Andri Baltensweiler, Nina Buchmann, Harald Bugmann, Arthur Geßler, Mana Gharun, Francesco Minunno, Andreas Rigling, Brigitte Rohner, Jonas Stillhard, Esther Thürig, Peter Waldner, Marco Ferretti, Werner Eugster, Marcus Schaub
Software Mentions: 1
Published: over 4 years ago

10.1016/j.xhgg.2020.100015

Missense substitutions at a conserved 14-3-3 binding site in HDAC4 cause a novel intellectual disability syndrome.
Cited by: 5
Author(s): Emma Wakeling, Meriel McEntagart, Michael Bruccoleri, Charles Shaw‐Smith, Karen Stals, Matthew Wakeling, Angela Barnicoat, Clare E. Beesley, Andrea Hanson‐Kahn, Mary K. Kukolich, David A. Stevenson, Philippe M. Campeau, Sian Ellard, Sarah H. Elsea, Xiang-Jiao Yang, Richard Caswell
Software Mentions: 1
Published: almost 4 years ago

10.1038/s41438-020-0323-3

Deep learning image segmentation and extraction of blueberry fruit traits associated with harvestability and yield
Cited by: 47
Author(s): Xiaofeng Ni, Changying Li, Huanyu Jiang, Fumiomi Takeda
Software Mentions: 1
Published: over 4 years ago

10.1120/jacmp.v3i4.2556

An immobilization and localization technique for SRT and IMRT of intracranial tumors
Cited by: 2
Author(s): L. Leybovich, Anil Sethi, Nesrin Dogan, Edward Melian, Mathew J. Krasin, Bahman Emami
Software Mentions: 1
Published: about 22 years ago

10.1186/s12968-021-00742-3

Multivendor comparison of global and regional 2D cardiovascular magnetic resonance feature tracking strains vs tissue tagging at 3T
Cited by: 7
Author(s): Sebastian Militaru, Roman Panovský, Vincent Hanet, Mihaela Silvia Amzulescu, Hélène Langet, Mary Luz Mojica‐Pisciotti, Anne‐Catherine Pouleur, Jean-Louis J. Vanoverschelde, Bernhard Gerber
Software Mentions: 1
Published: over 3 years ago

10.1002/jcb.29143

Collaboration of MYC and RUNX2 in lymphoma simulates T‐cell receptor signaling and attenuates p53 pathway activity
Cited by: 5
Author(s): Jodie Hay, Kathryn Gilroy, Camille Huser, Anna Kilbey, Alma McDonald, Amanda MacCallum, Ailsa K. Holroyd, Ewan R. Cameron, James C. Neil
Software Mentions: 1
Published: over 5 years ago

10.3390/jcm9092818

Quality Characteristics and Clinical Relevance of In-House 3D-Printed Customized Polyetheretherketone (PEEK) Implants for Craniofacial Reconstruction
Cited by: 33
Author(s): Neha Sharma, Soheila Aghlmandi, Shuaishuai Cao, Christoph Kunz, Philipp Honigmann, Florian M. Thieringer
Software Mentions: 1
Published: about 4 years ago

10.1098/rspb.2011.2363

Genetic consequences of climate change for northern plants
Cited by: 162
Author(s): Inger Greve Alsos, Dorothée Ehrich, Wilfried Thuiller, Pernille Bronken Eidesen, Andreas Tribsch, Peter Schönswetter, Claire Lagaye, Pierre Taberlet, Christian Brochmann
Software Mentions: 1
Published: almost 13 years ago

10.1186/s40510-019-0274-0

Effect of micro-osteoperforation on the rate of canine retraction: a split-mouth randomized controlled trial
Cited by: 49
Author(s): Amira A. Aboalnaga, Mona M. Salah Fayed, Noha A El-Ashmawi, Sanaa Abou Zeid Soliman
Software Mentions: 1
Published: over 5 years ago

10.1038/sdata.2018.254

PaleoClim, high spatial resolution paleoclimate surfaces for global land areas
Cited by: 232
Author(s): Jason L. Brown, Daniel J. Hill, Aisling M. Dolan, Ana Carolina Carnaval, Alan M. Haywood
Software Mentions: 1
Published: almost 6 years ago