Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
pypi: engine
Pure python extensible SQL database engine supporting NULL values. Formally SnakeSQL.Papers that mentioned: 732
cran: HyPhy
Macroevolutionary phylogentic analysis of species trees and gene treesPapers that mentioned: 722
bioconductor: DEGseq
Identify Differentially Expressed Genes from RNA-seq dataPapers that mentioned: 697
pypi: PsychoPy
PsychoPy provides easy, precise, flexible experiments in behavioural sciencesPapers that mentioned: 691
cran: factoextra
Extract and Visualize the Results of Multivariate Data AnalysesPapers that mentioned: 650
pypi: pandas
Powerful data structures for data analysis, time series, and statisticsPapers that mentioned: 640
pypi: Analyze
Analyze is a python library that provides comprehensive statistical analysis of a dataframe in 5 lines of code. It creates significant insight for data scientists, analysts and machine learning engineers, enabling quick understanding of a dataset.Papers that mentioned: 615
bioconductor: COMPASS
Combinatorial Polyfunctionality Analysis of Single CellsPapers that mentioned: 614
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)Papers that mentioned: 586
pypi: environment
This library provides parsing and validation of environment variables.Papers that mentioned: 569
pypi: Manager
Manager is the Components Manager package of Umbra, sIBL_GUI and sIBL_Reporter.Papers that mentioned: 524
bioconductor: RTCA
Open-source toolkit to analyse data from xCELLigence System (RTCA)Papers that mentioned: 516
cran: STAT
Interactive Document for Working with Basic Statistical AnalysisPapers that mentioned: 508
pypi: 2
Papers that mentioned: 499cran: survivalROC
Time-Dependent ROC Curve Estimation from Censored Survival DataPapers that mentioned: 479
bioconductor: ACE
Absolute Copy Number Estimation from Low-coverage Whole Genome SequencingPapers that mentioned: 478
bioconductor: ggtree
an R package for visualization of tree and annotation dataPapers that mentioned: 474
cran: Spectrum
Fast Adaptive Spectral Clustering for Single and Multi-View DataPapers that mentioned: 450
cran: pvclust
Hierarchical Clustering with P-Values via Multiscale Bootstrap ResamplingPapers that mentioned: 442
bioconductor: CAMERA
Collection of annotation related methods for mass spectrometry dataPapers that mentioned: 429
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU WienPapers that mentioned: 419
pypi: and
A package to prevent Dependency Confusion attacks against Yandex.Papers that mentioned: 418
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.Papers that mentioned: 416
bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequencesPapers that mentioned: 415
pypi: py
library with cross-python path, ini-parsing, io, code, log facilitiesPapers that mentioned: 403
pypi: system
Papers that mentioned: 393pypi: GeoDa
Papers that mentioned: 389pypi: Explorer
A module to control the Explorer HAT Raspberry Pi Addon BoardPapers that mentioned: 379
cran: glmmTMB
Generalized Linear Mixed Models using Template Model BuilderPapers that mentioned: 373