Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: ACE

https://packages.ecosyste.ms/registries/bioconductor.org/packages/ACE

Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing
1 version
Latest release: about 1 year ago
7,022 downloads total

Papers Mentioning ACE 478

10.1186/s40425-018-0422-y
33rd Annual Meeting & Pre-Conference Programs of the Society for Immunotherapy of Cancer (SITC 2018)
Cited by: 36
Author(s):
Software Mentions: 9
Published: about 6 years ago
10.7717/peerj.6746
Deterministic processes dominate soil microbial community assembly in subalpine coniferous forests on the Loess Plateau
Cited by: 19
Author(s): Pengyu Zhao, Jiabing Bao, Xue Wang, Yi Liu, Cui Li, Bo Chai
Software Mentions: 9
Published: over 5 years ago
10.3390/s20051500
Towards IoT-Aided Human–Robot Interaction Using NEP and ROS: A Platform-Independent, Accessible and Distributed Approach
Cited by: 15
Author(s): Enrique Coronado, Gentiane Venture
Software Mentions: 9
Published: over 4 years ago
10.1371/journal.pcbi.1008742
Wide range of metabolic adaptations to the acquisition of the Calvin cycle revealed by comparison of microbial genomes
Cited by: 11
Author(s): Johannes Asplund-Samuelsson, Elton P. Hudson
Software Mentions: 9
Published: almost 4 years ago
10.3389/fimmu.2018.00462
Analyzing Immunoglobulin Repertoires
Cited by: 77
Author(s): Neha Chaudhary, Duane R. Wesemann
Software Mentions: 8
Published: over 6 years ago
10.1371/journal.pone.0000737
ADaCGH: A Parallelized Web-Based Application and R Package for the Analysis of aCGH Data
Cited by: 26
Author(s): Ramón Díaz‐Uriarte, Oscar M. Rueda
Software Mentions: 8
Published: over 17 years ago
10.1038/s41396-018-0159-0
Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom
Cited by: 346
Author(s): Yuanyuan Xue, Huihuang Chen, Jun Yang, Min Liu, Bangqin Huang, Jun Yang
Software Mentions: 7
Published: over 6 years ago
10.7717/peerj.4233
­Comparative spigot ontogeny across the spider tree of life
Cited by: 11
Author(s): Rachael E. Alfaro, Charles E. Griswold, Kelly B. Miller
Software Mentions: 7
Published: almost 7 years ago
10.1038/s41598-020-67221-0
Diversity hotspot and unique community structure of foraminifera in the world’s deepest marine blue hole – Sansha Yongle Blue Hole
Cited by: 13
Author(s): Qingxia Li, Yanli Lei, Raphaёl Morard, Tiegang Li, Baodong Wang
Software Mentions: 7
Published: over 4 years ago
10.1371/journal.pone.0191781
Large-scale climatic phenomena drive fluctuations in macroinvertebrate assemblages in lowland tropical streams, Costa Rica: The importance of ENSO events in determining long-term (15y) patterns
Cited by: 23
Author(s): Pablo E. Gutiérrez‐Fonseca, Alonso Ramírez, Catherine M. Pringle
Software Mentions: 6
Published: almost 7 years ago
10.1038/srep33555
The Tara Oceans voyage reveals global diversity and distribution patterns of marine planktonic ciliates
Cited by: 65
Author(s): Anna Gimmler, Ralf Korn, Colomban de Vargas, Stéphane Audic, Thorsten Stoeck
Software Mentions: 6
Published: about 8 years ago
10.1186/s13029-015-0042-6
PyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols
Cited by: 3
Author(s): Alexandros Kanterakis, Joël Kuiper, George Potamias, Morris A. Swertz
Software Mentions: 6
Published: about 9 years ago
10.1371/journal.pbio.2004356
Antibiotic combination efficacy (ACE) networks for a Pseudomonas aeruginosa model
Cited by: 68
Author(s): Camilo Barbosa, Robert Beardmore, Hinrich Schulenburg, Gunther Jansen
Software Mentions: 5
Published: over 6 years ago
10.1186/1471-2164-11-571
Comparing de novo assemblers for 454 transcriptome data
Cited by: 240
Author(s): Sujai Kumar, Mark Blaxter
Software Mentions: 5
Published: about 14 years ago
10.1155/2014/748750
The Preventable Risk Integrated ModEl and Its Use to Estimate the Health Impact of Public Health Policy Scenarios
Cited by: 45
Author(s): Peter Scarborough, Richard Harrington, Anja Mizdrak, Lijuan Zhou, Aiden Doherty
Software Mentions: 5
Published: almost 11 years ago
10.7717/peerj-cs.207
Event-driven industrial robot control architecture for the Adept V+ platform
Cited by: 3
Author(s): Oleksandr Semeniuta, Petter Falkman
Software Mentions: 5
Published: over 5 years ago
10.1371/journal.pcbi.1006767
The intrinsic dimension of protein sequence evolution
Cited by: 14
Author(s): Elena Facco, Andrea Pagnani, Elena Tea Russo, Alessandro Laio
Software Mentions: 5
Published: over 5 years ago
10.4056/sigs.1353455
Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9
Cited by: 4
Author(s): Tanja Davidsen, Ramana Madupu, Peter J. Sterk, Dawn Field, George M Garrity, Jack A. Gilbert, Frank Oliver Glöckner, Lynette Hirschman, Eugene Kolker, Renzo Kottmann, Nikos C. Kyrpides, Patrick Meyer, Norman Morrison, Lynn M. Schriml, Tatiana Tatusova, John Wooley
Software Mentions: 5
Published: almost 15 years ago
10.3389/fmed.2021.646710
Dietary and Pharmacologic Manipulations of Host Lipids and Their Interaction With the Gut Microbiome in Non-human Primates
Cited by: 3
Author(s): Jennifer M. Lang, Leslie R. Sedgeman, Lei Cai, Joseph D. Layne, Zhen Wang, Calvin Pan, Richard Lee, Ryan E. Temel, Aldons J. Lusis
Software Mentions: 4
Published: about 3 years ago
10.1002/ece3.7037
FastD: Fast detection of insecticide target‐site mutations and overexpressed detoxification genes in insect populations from RNA‐Seq data
Cited by: 1
Author(s): Longfei Chen, Kun Lang, Mei Yang, Zhanghong Shi, Kang He, Fei Li, Huamei Xiao, Gōngyín Yè, Zhaojun Han
Software Mentions: 4
Published: about 4 years ago
10.3389/fmicb.2017.01943
An Investigation into Rumen Fungal and Protozoal Diversity in Three Rumen Fractions, during High-Fiber or Grain-Induced Sub-Acute Ruminal Acidosis Conditions, with or without Active Dry Yeast Supplementation
Cited by: 38
Author(s): Suzanne L. Ishaq, Ousama AlZahal, Nicola Walker, B.W. McBride
Software Mentions: 4
Published: about 7 years ago
10.1371/journal.pntd.0007741
Endemic Disease Control Agents’ perception on the fight against Aedes aegypti and the prevention of arbovirus infections in Brazil
Cited by: 2
Author(s): Cíntia Pereira Donateli, Ariadne Barbosa do Nascimento Einloft, André Luiz Coutinho, Rosângela Minardi Mitre Cotta, Glauce Dias da Costa
Software Mentions: 4
Published: about 5 years ago
10.1186/1471-2164-15-37
Comparison of different assembly and annotation tools on analysis of simulated viral metagenomic communities in the gut
Cited by: 74
Author(s): Jorge F. Vázquez-Castellanos, Rodrigo García-López, Vicente Pérez‐Brocal, Miguel Pignatelli, Andrés Moya
Software Mentions: 4
Published: almost 11 years ago
10.1371/journal.pone.0158496
The Evolution of Diapsid Reproductive Strategy with Inferences about Extinct Taxa
Cited by: 16
Author(s): Jason R. Moore, David J. Varricchio
Software Mentions: 4
Published: over 8 years ago
10.1371/journal.pone.0044185
Sequencing and Characterization of Striped Venus Transcriptome Expand Resources for Clam Fishery Genetics
Cited by: 23
Author(s): Alessandro Coppe, Stefania Bortoluzzi, Giulia Murari, Ilaria A. M. Marino, Lorenzo Zane, Chiara Papetti
Software Mentions: 4
Published: about 12 years ago
10.1186/1471-2164-9-S2-S17
Array CGH data modeling and smoothing in Stationary Wavelet Packet Transform domain
Cited by: 15
Author(s): Heng Huang, Nha Nguyen, S. Oraintara, An Vo
Software Mentions: 4
Published: almost 17 years ago
10.1080/20013078.2018.1461450
ISEV2018 abstract book
Cited by: 157
Author(s): Clotilde Théry, Kenneth W. Witwer
Software Mentions: 4
Published: over 6 years ago
10.1371/journal.pone.0234860
BiomMiner: An advanced exploratory microbiome analysis and visualization pipeline
Cited by: 18
Author(s): Amirhossein Shamsaddini, Kimia Dadkhah, Patrick M. Gillevet
Software Mentions: 4
Published: over 4 years ago
10.3389/fvets.2020.00251
Rumen Microbiota Distribution Analyzed by High-Throughput Sequencing After Oral Doxycycline Administration in Beef Cattle
Cited by: 5
Author(s): Fengmei Chen, Guangcun Cheng, Yan Xu, Yunzhou Wang, Qingxiang Xia, Shiqiang Hu
Software Mentions: 4
Published: over 4 years ago
10.1098/rsos.150636
Temporal and phylogenetic evolution of the sauropod dinosaur body plan
Cited by: 45
Author(s): Karl T. Bates, Philip D. Mannion, Peter L. Falkingham, Stephen L. Brusatte, John R. Hutchinson, Alejandro Otero, William I. Sellers, Corwin Sullivan, Kent A. Stevens, Vivian Allen
Software Mentions: 4
Published: over 8 years ago
10.1186/1471-2164-12-402
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
Cited by: 2,222
Author(s): Nabil-Fareed Alikhan, Nicola K. Petty, Nouri L. Ben Zakour, Scott A. Beatson
Software Mentions: 4
Published: over 13 years ago
10.1186/1471-2105-13-S8-S8
An eQTL biological data visualization challenge and approaches from the visualization community
Cited by: 10
Author(s): Christopher W. Bartlett, Soo Yeon Cheong, Liping Hou, Jesse Paquette, Pek Yee Lum, Günter Jäger, Florian Battke, Corinna Vehlow, Julian Heinrich, Kay Nieselt, Ryo Sakai, Jan Aerts, William C. Ray
Software Mentions: 3
Published: over 12 years ago
10.3390/e22020208
Nonlinear Canonical Correlation Analysis:A Compressed Representation Approach
Cited by: 1
Author(s): Amichai Painsky, Meir Feder, Naftali Tishby
Software Mentions: 3
Published: almost 5 years ago
10.1371/journal.pone.0244433
A sound coding strategy based on a temporal masking model for cochlear implants
Cited by: 6
Author(s): E Kludt, Waldo Nogueira, Thomas Lenarz, Andreas Buechner
Software Mentions: 3
Published: almost 4 years ago
10.1371/journal.pone.0177488
Spatiotemporal analysis of microbial community dynamics during seasonal stratification events in a freshwater lake (Grand Lake, OK, USA)
Cited by: 38
Author(s): J. Morrison, Kristina Baker, Richard M. Zamor, Steve Nikolai, Mostafa S. Elshahed
Software Mentions: 3
Published: over 7 years ago
10.1186/1471-2105-12-474
Jetset: selecting the optimal microarray probe set to represent a gene
Cited by: 257
Author(s): Qiyuan Li, Nicolai J. Birkbak, Balázs Győrffy, Zoltán Szállási, Aron C. Eklund
Software Mentions: 3
Published: almost 13 years ago
10.1371/journal.pone.0017000
Pyrosequencing-Based Assessment of Bacterial Community Structure Along Different Management Types in German Forest and Grassland Soils
Cited by: 440
Author(s): Heiko Nacke, Andrea Thürmer, Antje Wollherr, Christiane Will, Ladislav Hodač, Nadine Herold, Ingo Schöning, Marion Schrumpf, Rolf Daniel
Software Mentions: 3
Published: almost 14 years ago
10.1186/s13007-017-0253-8
Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping
Cited by: 33
Author(s): Pouria Sadeghi‐Tehran, Nicolas Virlet, Kasra Sabermanesh, Malcolm J. Hawkesford
Software Mentions: 3
Published: about 7 years ago
10.3390/v9120384
Cleavage and Structural Transitions during Maturation of Staphylococcus aureus Bacteriophage 80α and SaPI1 Capsids
Cited by: 11
Author(s): James L. Kizziah, Keith A. Manning, Altaira D. Dearborn, Erin A. Wall, Laura Klenow, Rosanne L.L. Hill, Michael Spilman, Scott M. Stagg, Gail E. Christie, Terje Dokland
Software Mentions: 3
Published: almost 7 years ago
10.1371/journal.pone.0058404
Identification of a Novel Human Papillomavirus by Metagenomic Analysis of Samples from Patients with Febrile Respiratory Illness
Cited by: 56
Author(s): John L. Mokili, Bas E. Dutilh, Yan Wei Lim, Bradley S. Schneider, Travis R. Taylor, Matthew Haynes, David Metzgar, Christopher A. Myers, Patrick J. Blair, Bahador Nosrat, Nathan Wolfe, Forest Rohwer
Software Mentions: 3
Published: over 11 years ago
10.1371/journal.pone.0214619
Identification of pharmacodynamic biomarker hypotheses through literature analysis with IBM Watson
Cited by: 6
Author(s): Sonja Hatz, Scott Spangler, Andrew T. Bender, Matthew Studham, Philipp Haselmayer, Alix M. B. Lacoste, Van C Willis, Richard L. Martin, Harsha Gurulingappa, Ulrich Betz
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pone.0213694
Braincase simplification and the origin of lissamphibians
Cited by: 6
Author(s): Jade B. Atkins, Robert R. Reisz, Hillary C. Maddin
Software Mentions: 3
Published: over 5 years ago
10.1186/s12859-017-1784-8
Evaluation of the impact of Illumina error correction tools on de novo genome assembly
Cited by: 45
Author(s): Mahdi Heydari, Giles Miclotte, Piet Demeester, Yves Van de Peer, Jan Fostier
Software Mentions: 3
Published: over 7 years ago
10.1371/journal.pone.0148135
Symbiotic Bacteria in Gills and Guts of Chinese Mitten Crab (Eriocheir sinensis) Differ from the Free-Living Bacteria in Water
Cited by: 71
Author(s): Meiling Zhang, Yanfa Sun, Liqiao Chen, Chen Cai, Fang Qiao, Zhen‐Yu Du, Erchao Li
Software Mentions: 3
Published: almost 9 years ago
10.1371/journal.pcbi.1007630
Direct coupling analysis of epistasis in allosteric materials
Cited by: 13
Author(s): Barbara Bravi, Riccardo Ravasio, Carolina Brito, Matthieu Wyart
Software Mentions: 3
Published: over 4 years ago
10.1186/1471-2105-8-198
A novel approach to sequence validating protein expression clones with automated decision making
Cited by: 8
Author(s): Elena Taycher, Andreas Rolfs, Yanhui Hu, Dongmei Zuo, Stephanie E. Mohr, Janice Williamson, Joshua LaBaer
Software Mentions: 3
Published: over 17 years ago
10.1155/2018/2837328
Illumina MiSeq Sequencing for Preliminary Analysis of Microbiome Causing Primary Endodontic Infections in Egypt
Cited by: 15
Author(s): Sally Ali Tawfik, Marwa Azab, Ali Abdellah Abdelrahman Ahmed, Dalia Mukhtar Fayyad
Software Mentions: 3
Published: almost 7 years ago
10.3390/jimaging7070108
Media Forensics Considerations on DeepFake Detection with Hand-Crafted Features
Cited by: 9
Author(s): Dennis Siegel, Christian Kraetzer, Stefan Seidlitz, Jana Dittmann
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pone.0165171
Experimental Evaluation of Suitability of Selected Multi-Criteria Decision-Making Methods for Large-Scale Agent-Based Simulations
Cited by: 6
Author(s): Petr Tučník, Vladimír Bureš
Software Mentions: 3
Published: about 8 years ago
10.1371/journal.pcbi.1003646
Quantification of HTLV-1 Clonality and TCR Diversity
Cited by: 68
Author(s): Daniel J. Laydon, Anat Melamed, Aaron Sim, Nicolas Gillet, Kathleen Sim, Sam Darko, J. Simon Kroll, Daniel C. Douek, David A. Price, Charles R. M. Bangham, Becca Asquith
Software Mentions: 3
Published: over 10 years ago
10.1186/1471-2164-11-692
A new implementation of high-throughput five-dimensional clone pooling strategy for BAC library screening
Cited by: 11
Author(s): Frank M. You, Ming Luo, Kenong Xu, Karin R. Deal, Olin D. Anderson, Jan Dvořák
Software Mentions: 3
Published: almost 14 years ago
10.1017/S1041610214000416
Review of brief cognitive tests for patients with suspected dementia
Cited by: 158
Author(s): Latha Velayudhan, Seung‐Ho Ryu, Malgorzata Raczek, Michael Philpot, James Lindesay, Matthew Critchfield, Gill Livingston
Software Mentions: 3
Published: over 10 years ago
10.3390/s20092483
A Blockchain-Assisted Intelligent Transportation System Promoting Data Services with Privacy Protection
Cited by: 22
Author(s): Yuhong Li, Kun Ouyang, Nanxuan Li, Rahim Rahmani, Haojun Yang, Yiwei Pei
Software Mentions: 3
Published: over 4 years ago
10.7717/peerj.4650
Shifting reef fish assemblages along a depth gradient in Pohnpei, Micronesia
Cited by: 20
Author(s): Richard R. Coleman, Joshua M. Copus, Daniel M. Coffey, Robert K. Whitton, Brian W. Bowen
Software Mentions: 3
Published: over 6 years ago
10.1155/2014/687346
Models and Frameworks: A Synergistic Association for Developing Component-Based Applications
Cited by: 1
Author(s): Diego Alonso, Francisco Sánchez-Ledesma, Pedro Sánchez, Javier Pastor, Bárbara Álvarez
Software Mentions: 3
Published: almost 11 years ago
10.1186/s12989-019-0332-2
Hepatotoxicity and the role of the gut-liver axis in rats after oral administration of titanium dioxide nanoparticles
Cited by: 71
Author(s): Zhangjian Chen, Di Zhou, Shuo Han, Shiyong Zhou
Software Mentions: 3
Published: almost 5 years ago
10.1155/2015/579417
Addenbrooke’s Cognitive Examination and Individual Domain Cut-Off Scores for Discriminating between Different Cognitive Subtypes of Parkinson’s Disease
Cited by: 15
Author(s): Dagmar Beránková, Eva Janoušová, Martina Mračková, Ilona Eliasova, Milena Košťálová, Světlana Skutilová, Irena Rektorová
Software Mentions: 3
Published: almost 10 years ago
10.1038/s41598-020-74877-1
Low E2F2 activity is associated with high genomic instability and PARPi resistance
Cited by: 4
Author(s): Jonathan Rennhack, Eran R. Andrechek
Software Mentions: 3
Published: about 4 years ago
10.1007/s11214-020-00721-7
The ELFIN Mission
Cited by: 39
Author(s): V. Angelopoulos, Ethan Tsai, L. Bingley, Christopher J. Shaffer, D. L. Turner, W. Li, J. Liu, А. V. Artemyev, X.-J. Zhang, R. J. Strangeway, Richard E. Wirz, Yuri Shprits, В. А. Сергеев, R. Caron, M. Chung, P. Cruce, W. A. D. Greer, E. W. Grimes, Kathryn Hector, M. J. Lawson, D. Leneman, Emmanuel Masongsong, Chuck Russell, C. Wilkins, David Hinkley, J. B. Blake, Nick Adair, Michael C. Allen, Mark Anderson, Michael Arreola-Zamora, Jessica Artinger, J. A. Asher, Donna Branchevsky, M. R. Capitelli, Rommel Castro, Gary Chao, Nathan Chung, Micah Cliffe, Kyle Colton, Cian Costello, D. Depe, Benjamin Domae, S. Eldin, L. Fitzgibbon, Alex Flemming, Ian Fox, D. M. Frederick, A. G. Gilbert, Anthony Gildemeister, A. González, Bryan Hesford, Sharvani Jha, Ning Kang, J. L. King, R. Krieger, K. Lian, Jason Mao, Emmons McKinney, J. Miller, A. Norris, Matt Nuesca, A. Palla, E. S. Y. Park, Carter Pedersen, Zhining Qu, Reuben Rozario, Erik Rye, Ryan Seaton, A. Subramanian, Stephen Sundin, Amy Tan, Wynne Turner, Austin Villegas, Matt Wasden, Graham Wing, C. Wong, Erica Xie, Satoru Yamamoto, Rebecca Yap, Anais Zarifian, G. Y. Zhang
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-017-02845-3
Phylogenomic Insight into Salinispora (Bacteria, Actinobacteria) Species Designations
Cited by: 24
Author(s): Natalie Millán-Aguiñaga, Krystle L. Chavarría, Juan A. Ugalde, Anne Catrin Letzel, Greg W. Rouse, Paul R. Jensen
Software Mentions: 3
Published: over 7 years ago
10.1029/2019RG000686
Spaceborne Cloud and Precipitation Radars: Status, Challenges, and Ways Forward
Cited by: 65
Author(s): Alessandro Battaglia, Pavlos Kollias, Ranvir Dhillon, Richard Roy, Simone Tanelli, Katia Lamer, Mircea Grecu, Matthew Lebsock, Daniel Watters, Kamil Mróz, Gerald M. Heymsfield, Lihua Li, Katsuko Furukawa
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-017-18341-7
Discovering viral genomes in human metagenomic data by predicting unknown protein families
Cited by: 13
Author(s): Mauricio Barrientos‐Somarribas, David N. Messina, Christian Pou, Fredrik Lysholm, Annelie Bjerkner, Tobias Allander, Björn Andersson, Erik L. L. Sonnhammer
Software Mentions: 3
Published: almost 7 years ago
10.3389/fpls.2021.664997
Base Editing in Plants: Applications, Challenges, and Future Prospects
Cited by: 22
Author(s): Mawuli K. Azameti, Wadzani Dauda Palnam
Software Mentions: 3
Published: over 3 years ago
10.3389/fmolb.2021.729513
Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem
Cited by: 230
Author(s): Rodrigo Vargas Honorato, Panagiotis I. Koukos, Brian Jiménez‐García, A. Tsaregorodtsev, M. Verlato, Andrea Giachetti, Antonio Rosato, Alexandre Bonvin
Software Mentions: 3
Published: over 3 years ago
10.3389/fpls.2018.01775
Evolution of Plant Architecture, Functional Diversification and Divergent Evolution in the Genus Atractocarpus (Rubiaceae) for New Caledonia
Cited by: 14
Author(s): David Bruy, Tom Hattermann, Laure Barrabé, Arnaud Mouly, Daniel Barthélémy, Sandrine Isnard
Software Mentions: 3
Published: almost 6 years ago
10.1111/acel.13197
A decade of epigenetic change in aging twins: Genetic and environmental contributions to longitudinal DNA methylation
Cited by: 24
Author(s): Chandra A. Reynolds, Qihua Tan, Elizabeth Muñoz, Juulia Jylhävä, Jacob Hjelmborg, Lene Christiansen, Sara Hägg, Nancy L. Pedersen
Software Mentions: 3
Published: over 4 years ago
10.1371/journal.pone.0229661
Measuring childhood maltreatment: Psychometric properties of the Norwegian version of the Maltreatment and Abuse Chronology of Exposure (MACE) scale
Cited by: 11
Author(s): Roar Fosse, Dag Vegard Skjelstad, Inga Schalinski, Dorothea Thekkumthala, Thomas Elbert, Chris Margaret Aanondsen, Hanne Klæboe Greger, Thomas Jozefiak
Software Mentions: 3
Published: over 4 years ago
10.3389/fpsyg.2021.647899
Spatial and Motor Aspects in the “Action-Sentence Compatibility Effect”
Cited by: 3
Author(s): Alberto Greco
Software Mentions: 3
Published: over 3 years ago
10.1038/srep12978
From lithotroph- to organotroph-dominant: directional shift of microbial community in sulphidic tailings during phytostabilization
Cited by: 42
Author(s): Xiaofang Li, Philip L. Bond, Joy D. Van Nostrand, Jizhong Zhou, Longbin Huang
Software Mentions: 3
Published: over 9 years ago
10.1038/s41598-019-38894-z
The cingulum as a marker of individual differences in neurocognitive development
Cited by: 39
Author(s): Joe Bathelt, Amy Johnson, Mengya Zhang, Duncan E. Astle
Software Mentions: 3
Published: almost 6 years ago
10.1186/1471-2148-13-265
Regionalization of the axial skeleton in the ‘ambush predator’ guild – are there developmental rules underlying body shape evolution in ray-finned fishes?
Cited by: 30
Author(s): Erin E. Maxwell, L. T. Wilson
Software Mentions: 3
Published: almost 12 years ago
10.3389/fgene.2012.00182
Extensive inter-domain lateral gene transfer in the evolution of the human commensal Methanosphaera stadtmanae
Cited by: 15
Author(s): Mor N Lurie-Weinberger, Michael Peeri, Tamir Tuller, Uri Gophna
Software Mentions: 2
Published: almost 13 years ago
10.1007/s00787-014-0588-x
Maternal pre-pregnancy risk drinking and toddler behavior problems: the Norwegian Mother and Child Cohort Study
Cited by: 21
Author(s): Ann Kristin Knudsen, Jens Christoffer Skogen, Eivind Ystrøm, Børge Sivertsen, Grethe S. Tell, Leila Torgersen
Software Mentions: 2
Published: over 10 years ago
10.1186/1471-2105-11-130
Calling SNPs without a reference sequence
Cited by: 43
Author(s): Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan C. Schuster, Webb Miller
Software Mentions: 2
Published: over 14 years ago
10.1002/evl3.137
Compensatory<i>trans</i>-regulatory alleles minimizing variation in<i>TDH3</i>expression are common within<i>Saccharomyces cerevisiae</i>
Cited by: 21
Author(s): Brian P. H. Metzger, Patricia J. Wittkopp
Software Mentions: 2
Published: about 5 years ago
10.1159/000366040
The Mini-Addenbrooke's Cognitive Examination: A New Assessment Tool for Dementia
Cited by: 182
Author(s): Sharpley Hsieh, Sarah McGrory, Felicity Leslie, Kate Dawson, Samrah Ahmed, Chris Butler, James B. Rowe, Eneida Mioshi, John R. Hodges
Software Mentions: 2
Published: about 10 years ago
10.7759/cureus.10972
An Electronic Search Algorithm for Early Disseminated Intravascular Coagulopathy Diagnosis in the Intensive Care Unit: A Derivation and Validation Study
Cited by: 0
Author(s): Tabinda Jawaid, Naseema Gangat, Timothy Weister, Rahul Kashyap
Software Mentions: 2
Published: about 4 years ago
10.1186/s13034-021-00365-7
Assessing adverse childhood experiences, social, emotional, and behavioral symptoms, and subjective health complaints among Hungarian adolescents
Cited by: 10
Author(s): Beáta Kovács-Tóth, Barnabás Oláh, Gábor Papp, Ildikó Kuritárné Szabó
Software Mentions: 2
Published: over 3 years ago
10.1186/s12859-021-04058-y
Instance-based error correction for short reads of disease-associated genes
Cited by: 1
Author(s): Xuan Zhang, Yuansheng Liu, Zu-Guo Yu, Michael Blumenstein, György Hutvágner, Jinyan Li
Software Mentions: 2
Published: over 3 years ago
10.1155/2016/8495754
Support Vector Machine with Ensemble Tree Kernel for Relation Extraction
Cited by: 3
Author(s): Xiaoyong Liu, Hui Fu, Zidong Du
Software Mentions: 2
Published: almost 9 years ago
10.1371/journal.pone.0108714
Mycobiome of the Bat White Nose Syndrome Affected Caves and Mines Reveals Diversity of Fungi and Local Adaptation by the Fungal Pathogen Pseudogymnoascus (Geomyces) destructans
Cited by: 37
Author(s): Tao Zhang, Tanya R. Victor, S. Rajkumar, Xiaojiang Li, Joseph C. Okoniewski, Alan C. Hicks, April Davis, Kelly Broussard, Shannon L. LaDeau, Sudha Chaturvedi
Software Mentions: 2
Published: about 10 years ago
10.1371/journal.pone.0235740
Evaluation of larvicidal potential against larvae of Aedes aegypti (Linnaeus, 1762) and of the antimicrobial activity of essential oil obtained from the leaves of Origanum majorana L.
Cited by: 11
Author(s): Renata do Socorro Barbosa Chaves, Rosany Lopes Martins, Alex Bruno Lobato Rodrigues, Érica de Menezes Rabelo, Ana Luzia Ferreira Farias, Lethícia Barreto Brandão, Lizandra Lima Santos, Allan Kardec Ribeiro Galardo, Sheylla Susan Moreira da Silva de Almeida
Software Mentions: 2
Published: over 4 years ago
10.1371/journal.pone.0044137
Enhanced Solubilisation of Six PAHs by Three Synthetic Cyclodextrins for Remediation Applications: Molecular Modelling of the Inclusion Complexes
Cited by: 48
Author(s): E. Morillo, M.A. Sánchez-Trujillo, J. R. Moyano, Jaime Villaverde, María Eulalia Gómez-Pantoja, J. I. Pérez-Martínez
Software Mentions: 2
Published: about 12 years ago
10.1371/journal.pone.0223351
Motivation for alcohol consumption or abstinence during pregnancy: A clinical-qualitative study in Brazil
Cited by: 8
Author(s): Júlia Lustosa Martinelli, Carla Maria Ramos Germano, Lucimar Retto da Silva de Avó, Bruno José Barcellos Fontanella, Débora Gusmão Melo
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0243826
Occupational exposures and exacerbations of asthma and COPD—A general population study
Cited by: 5
Author(s): Stinna Skaaby, Esben Meulengracht Flachs, Peter Lange, Vivi Schlünssen, Jacob Louis Marott, Charlotte Brauer, Børge G. Nordestgaard, Steven Sadhra, Om Kurmi, Jens Peter Bonde
Software Mentions: 2
Published: almost 4 years ago
10.1371/journal.pone.0033235
Toolbox for Non-Intrusive Structural and Functional Analysis of Recombinant VLP Based Vaccines: A Case Study with Hepatitis B Vaccine
Cited by: 45
Author(s): Anke M. Mulder, Bridget Carragher, Victoria Towne, Meng Yuan, Yang Wang, Lance Dieter, Clinton S. Potter, Michael W. Washabaugh, Robert D. Sitrin, Qinjian Zhao
Software Mentions: 2
Published: over 12 years ago
10.1186/s12877-021-02376-7
Applying the RE-AIM implementation framework to evaluate fall prevention interventions in community dwelling adults with cognitive impairment: a review and secondary analysis
Cited by: 1
Author(s): Megan Racey, Maureen Markle‐Reid, Donna Fitzpatrick‐Lewis, Muhammad Usman Ali, Hélène Gagné, Susan Hunter, Jenny Ploeg, Richard Sztramko, Lisa Harrison, Robert Lewis, Milos Jovkovic, Diana Sherifali
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0166765
Deforestation Impacts on Bat Functional Diversity in Tropical Landscapes
Cited by: 44
Author(s): Rodrigo García‐Morales, Claudia E. Moreno, Ernesto I. Badano, Iriana Zuria, Jorge Galindo‐González, Alberto E. Rojas-Martínez, Eva Samanta Ávila-Gómez
Software Mentions: 2
Published: almost 8 years ago
10.1136/bmj.m115
The Adaptive designs CONSORT Extension (ACE) statement: a checklist with explanation and elaboration guideline for reporting randomised trials that use an adaptive design
Cited by: 56
Author(s): Munyaradzi Dimairo, Philip Pallmann, James Wason, Susan Todd, Thomas Jaki, Steven A. Julious, Adrian P. Mander, Christopher J. Weir, Franz König, Marc K. Walton, Jon Nicholl, Elizabeth Coates, Katie Biggs, Toshimitsu Hamasaki, Michael A. Proschan, John Scott, Yuki Ando, Daniel Hind, Douglas G. Altman
Software Mentions: 2
Published: over 4 years ago
10.1038/s41420-020-00309-8
Fecal microbiota transplantation from patients with autoimmune encephalitis modulates Th17 response and relevant behaviors in mice
Cited by: 12
Author(s): Hao Chen, Zhaoyu Chen, Liping Shen, Xiuhua Wu, Xueying Ma, Dengna Lin, Man Zhang, Xiaomeng Ma, Yingying Liu, Zhanhang Wang, Yuefeng Zhang, Zuying Kuang, Zhiwei Lü, Xuefei Li, Lili Ma, Xiuli Lin, Lei Si, Xiaohong Chen
Software Mentions: 2
Published: over 4 years ago
10.3389/fmicb.2015.00624
Distribution of iron- and sulfate-reducing bacteria across a coastal acid sulfate soil (CASS) environment: implications for passive bioremediation by tidal inundation
Cited by: 23
Author(s): Yu Ling, Richard T Bush, Kliti Grice, Svenja Tulipani, Lyndon Berwick, John W. Moreau
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0122304
Redox-Specialized Bacterioplankton Metacommunity in a Temperate Estuary
Cited by: 10
Author(s): Peeter Laas, Jaak Simm, Inga Lips, Urmas Lips, Veljo Kisand, Madis Metsis
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0081334
Blood Amyloid Beta Levels in Healthy, Mild Cognitive Impairment and Alzheimer’s Disease Individuals: Replication of Diastolic Blood Pressure Correlations and Analysis of Critical Covariates
Cited by: 35
Author(s): Agustín Ruiz, Pedro Pesini, Ana Espinosa, Virginia Pérez‐Grijalba, Sergi Valero, Oscar Sotolongo‐Grau, Montserrat Alegret, Inmaculada Monleón, Asunción Lafuente, Mar Buendía, Marta Ibarria, Susana Ruiz, Isabel Hernández, Itziar San José, Lluís Tárraga, Merçé Boada, Manuel Sarasa
Software Mentions: 2
Published: almost 11 years ago
10.1371/journal.pone.0078687
Low Incidence of Spontaneous Type 1 Diabetes in Non-Obese Diabetic Mice Raised on Gluten-Free Diets Is Associated with Changes in the Intestinal Microbiome
Cited by: 105
Author(s): Eric Marietta, Andrés Gómez, Carl J. Yeoman, Ashenafi Y. Tilahun, Chad R. Clark, David Luckey, Joseph A. Murray, Bryan A. White, Yogish C. Kudva, Govindarajan Rajagopalan
Software Mentions: 2
Published: about 11 years ago
10.1186/s13104-015-1382-7
cFinder: definition and quantification of multiple haplotypes in a mixed sample
Cited by: 6
Author(s): Norbert Niklas, Julia Hafenscher, Agnes Barna, Karin Wiesinger, Johannes Pröll, Stephan Dreiseitl, Sandra Preuner-Stix, Peter Valent, Thomas Lion, Christian Gabriel
Software Mentions: 2
Published: about 9 years ago
10.1371/journal.pone.0254965
A face recognition software framework based on principal component analysis
Cited by: 4
Author(s): Peng Peng, Ivens Portugal, Paulo Alencar, Donald Cowan
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pntd.0007672
Opportunistic pathogens and large microbial diversity detected in source-to-distribution drinking water of three remote communities in Northern Australia
Cited by: 10
Author(s): Mirjam Kaestli, Michelle O’Donnell, Alea Rose, Jessica R. Webb, Mark Mayo, Bart J. Currie, Karen S. Gibb
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0082263
The Effect of Automatic Gain Control Structure and Release Time on Cochlear Implant Speech Intelligibility
Cited by: 35
Author(s): Phyu P. Khing, Brett A. Swanson, Eliathamby Ambikairajah
Software Mentions: 2
Published: almost 11 years ago
10.1186/1471-2458-14-15
Study Protocol - Alcohol Management Plans (AMPs) in remote indigenous communities in Queensland: their impacts on injury, violence, health and social indicators and their cost-effectiveness
Cited by: 17
Author(s): Alan R. Clough, Michelle S. Fitts, Jan Robertson, Anthony Shakeshaft, Adrian Miller, Christopher M. Doran, Reinhold Müller, Valmae Ypinazar, David S. Martin, Robyn McDermott, Rob Sanson‐Fisher, Simon Towle, Stephen A Margolis, Caryn West
Software Mentions: 2
Published: almost 11 years ago
10.1371/journal.pcbi.1000389
Molecular Mechanics of the α-Actinin Rod Domain: Bending, Torsional, and Extensional Behavior
Cited by: 51
Author(s): Javad Golji, Ruth Collins, Mohammad R. K. Mofrad
Software Mentions: 2
Published: over 15 years ago