Ecosyste.ms: Papers

10.1186/s12864-016-3260-7

DeSigN: connecting gene expression with therapeutics for drug repurposing and development
Cited by: 52
Author(s): Bernard Kok Bang Lee, Kai Hung Tiong, Jit Kang Chang, Chee Sun Liew, Zainal Ariff Abdul Rahman, Aik Choon Tan, Tsung Fei Khang, Sok Ching Cheong
Software Mentions: 7
Published: over 7 years ago

10.1002/cyto.a.23775

Automating the Shared Resource Laboratory Using Computer Scripts: A Case Report
Cited by: 0
Author(s): Christopher Hall, Laura Brown, Jennifer Graham, Sam Thompson, Bee Ling Ng
Software Mentions: 6
Published: about 5 years ago

10.3389/fimmu.2021.590742

High Throughput Multi-Omics Approaches for Clinical Trial Evaluation and Drug Discovery
Cited by: 30
Author(s): Jessica Zielinski, Jason J. Luke, Silvia Guglietta, Carsten Krieg
Software Mentions: 5
Published: about 3 years ago

10.1038/s41597-021-00896-w

Generation of a mouse SWATH-MS spectral library to quantify 10148 proteins involved in cell reprogramming
Cited by: 4
Author(s): Uxue Ulanga, Matthew R. Russell, Stefano Patassini, Julie Brazzatti, Ciaren Graham, Anthony D. Whetton, R.L. Graham
Software Mentions: 5
Published: about 3 years ago

10.1186/s12879-021-06528-3

A systematic review of the sensitivity and specificity of lateral flow devices in the detection of SARS-CoV-2
Cited by: 58
Author(s): Dylan A. Mistry, Jenny Wang, Mika-Erik Moeser, Thomas Starkey, Lee L
Software Mentions: 5
Published: almost 3 years ago

10.1002/ctm2.133

Analysis of single‐cell RNAseq identifies transitional states of T cells associated with hepatocellular carcinoma
Cited by: 12
Author(s): Yang Yz, Fangming Liu, Weiren Liu, Mingyue Ma, Jie Gao, Yan Lu, Li-Hao Huang, Xiaoying Li, Ying–Hong Shi, Xiangdong Wang, Duojiao Wu
Software Mentions: 5
Published: almost 4 years ago

10.1002/ctm2.462

Diversity and intratumoral heterogeneity in human gallbladder cancer progression revealed by single‐cell RNA sequencing
Cited by: 16
Author(s): Peizhan Chen, Yueqi Wang, Jingquan Li, Xiaobo Bo, Jie Wang, Lingxi Nan, Changcheng Wang, Qian Ba, Houbao Liu, Hui Wang
Software Mentions: 4
Published: almost 3 years ago

10.1016/j.isci.2021.102783

AMPK activation reverts mouse epiblast stem cells to naive state
Cited by: 4
Author(s): Yajing Liu, Junko Yamane, Akito Tanaka, Wataru Fujibuchi, Jun Yamashita
Software Mentions: 4
Published: almost 3 years ago

10.12688/wellcomeopenres.16584.2

­­­­­­­A type I IFN, prothrombotic hyperinflammatory neutrophil signature is distinct for COVID-19 ARDS­­­
Cited by: 31
Author(s): Leila Reyes, Manuel A. Sanchez-Garcia, Tyler Morrison, Andy J. M. Howden, Emily R. Watts, Simone Arienti, Pranvera Sadiku, Patricia Coelho, Ananda S. Mirchandani, Ailiang Zhang, David Hope, Sarah Clark, Jo Singleton, Shonna Johnston, Robert Grecian, Azin Poon, Sarah McNamara, Ian Harper, Max Head Fourman, Alejandro Brenes, Shalini Pathak, Adam Lloyd, Giovanny Rodriguez Blanco, Alex von Kriegsheim, Bart Ghesquière, Wesley Vermaelen, Camila Takeno Cologna, Kevin Dhaliwal, Nik Hirani, David H. Dockrell, Moira K. B. Whyte, David Griffith, Doreen A. Cantrell, Sarah R. Walmsley
Software Mentions: 4
Published: about 3 years ago

10.1007/s00018-021-03822-w

Immune cells lacking Y chromosome show dysregulation of autosomal gene expression
Cited by: 43
Author(s): Jan P. Dumanski, Jonatan Halvardson, Hanna Davies, Edyta Rychlicka-Buniowska, Jonas Mattisson, Behrooz Torabi Moghadam, Noémi Nagy, Kazimierz Węglarczyk, Karolina Bukowska-Straková, Marcus Danielsson, Paweł Olszewski, Arkadiusz Piotrowski, Erin Oerton, Aleksandra Ambicka, Marcin Przewoźnik, Łukasz Bełch, Tomasz Grodzicki, Piotr Chłosta, Stefan Imreh, Vilmantas Giedraitis, Lena Kilander, Jessica Nordlund, Adam Ameur, Ulf Gyllensten, Åsa Johansson, Alicja Józkowicz, Maciej Siedlar, Alicja Klich-Rączka, Janusz Jaszczyński, Stefan Enroth, Jarosław Baran, Martin Ingelsson, John Perry, Janusz Ryś, Lars A. Forsberg
Software Mentions: 4
Published: about 3 years ago

10.3389/fimmu.2021.684052

Low Energy Electron Irradiation Is a Potent Alternative to Gamma Irradiation for the Inactivation of (CAR-)NK-92 Cells in ATMP Manufacturing
Cited by: 11
Author(s): Lia Walcher, Ann-Kathrin Kistenmacher, Charline Sommer, Sebastian Böhlen, Christina Ziemann, Susann Dehmel, Armin Braun, U. Sandy Tretbar, Stephan Klöß, Axel Schambach, Michael Morgan, Dennis Löffler, Christoph Kämpf, Conny Blumert, Kristin Reiche, Jana Beckmann, Ulla König, Bastian Standfest, Martin Thoma, Gustavo R. Makert, Sebastian Ulbert, Uta Kossatz-Böhlert, Ulrike Köhl, Anna Dünkel, Frank Stephan
Software Mentions: 4
Published: almost 3 years ago

10.3389/fmolb.2021.676976

From System Modeling to System Analysis: The Impact of Resolution Level and Resolution Distribution in the Computer-Aided Investigation of Biomolecules
Cited by: 26
Author(s): Marco Giulini, Marta Rigoli, Giovanni Mattiotti, Roberto Menichetti, Thomas Tarenzi, Raffaele Fiorentini, Raffaello Potestio
Software Mentions: 3
Published: almost 3 years ago

10.15252/emmm.201607308

Attenuated <scp>PDGF</scp> signaling drives alveolar and microvascular defects in neonatal chronic lung disease
Cited by: 29
Author(s): Prajakta Oak, Tina Pritzke, Isabella Thiel, Markus Koschlig, Daphne S. Mous, Anita Windhorst, Noopur Jain, Oliver Eickelberg, Kai Foerster, Andreas Schulze, Wolfgang Goepel, Tobias Reicherzer, Harald Ehrhardt, Robbert J. Rottier, Peter Ahnert, Ludwig Gortner, Tushar J. Desai, Anne Hilgendorff
Software Mentions: 3
Published: over 6 years ago

10.1016/j.xpro.2020.100092

AbSeq Protocol Using the Nano-Well Cartridge-Based Rhapsody Platform to Generate Protein and Transcript Expression Data on the Single-Cell Level
Cited by: 11
Author(s): Jami R. Erickson, Florian Mair, Grace Bugos, Jody Martin, Aaron J. Tyznik, Margaret Nakamoto, Stefanie Mortimer, Martin Prlic
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0226056

Activation of GPR56, a novel adhesion GPCR, is necessary for nuclear androgen receptor signaling in prostate cells
Cited by: 10
Author(s): Julie Pratibha Singh, Manisha Dagar, Gunjan Dagar, Sudhir Kumar, Sudhir Rawal, Ravi Datta Sharma, Rakesh K. Tyagi, Gargi Bagchi
Software Mentions: 3
Published: over 3 years ago

10.1111/acel.13219

Immune checkpoint protein VSIG4 as a biomarker of aging in murine adipose tissue
Cited by: 18
Author(s): Brandon M. Hall, Anatoli S. Gleiberman, Evguenia Strom, Peter Krasnov, David Frescas, Slavoljub Vujcic, Olga V. Leontieva, Marina P. Antoch, V. R. Kogan, Igor Koman, Yi Zhu, Tamara Tchkonia, James L. Kirkland, Olga B. Chernova, Andrei V. Gudkov
Software Mentions: 3
Published: over 3 years ago

10.3389/fcimb.2019.00403

Mapping Alterations Induced by Long-Term Axenic Cultivation of Leishmania amazonensis Promastigotes With a Multiplatform Metabolomic Fingerprint Approach
Cited by: 1
Author(s): Frederico Crepaldi, Juliano Simões de Toledo, Anderson Oliveira do Carmo, Leopoldo Ferreira Marques Machado, Daniela Diniz Viana de Brito, Ângela Vieira Serufo, Ana Paula Martins Almeida, Laser Antônio Machado Oliveira, Tiago Queiroga Nery Ricotta, Douglas de Souza Moreira, Silvane Maria Fonseca Murta, Ariane Barros Diniz, Gustavo B. Menezes, Ángeles López‐Gonzálvez, Coral Barbas, Ana Paula Fernandes
Software Mentions: 3
Published: over 4 years ago

10.1186/s13058-021-01416-9

Cellular dormancy in minimal residual disease following targeted therapy
Cited by: 13
Author(s): Jason R. Ruth, Dhruv K. Pant, Tien-Chi Pan, Hans E. Seidel, Sanjeethan C. Baksh, Blaine A. Keister, Rita Singh, Christopher J. Sterner, Suzanne J. Bakewell, Susan E. Moody, George K. Belka, Lewis A. Chodosh
Software Mentions: 2
Published: almost 3 years ago

10.15252/emmm.201707678

mRNA mediates passive vaccination against infectious agents, toxins, and tumors
Cited by: 102
Author(s): Moritz Thran, Jean Mukherjee, Marion Pönisch, Katja Fiedler, Andreas Theß, Barbara L. Mui, Michael J. Hope, Ying K. Tam, Nigel Horscroft, Regina Heidenreich, Mariola Fotin‐Mleczek, Charles B. Shoemaker, Thomas Schlake
Software Mentions: 2
Published: almost 7 years ago

10.1371/journal.pone.0233846

Growth differentiation factor-15 slows the growth of murine prostate cancer by stimulating tumor immunity
Cited by: 14
Author(s): Yasmin Husaini, Vicky Wang-Wei Tsai, Rakesh Manandhar, Hong Ping Zhang, Ka Ki Michelle Lee-Ng, Hélène Lebhar, Christopher Marquis, David A. Brown, Samuel N. Breit
Software Mentions: 2
Published: almost 4 years ago

10.1186/1472-6882-13-145

Rhaphidophora korthalsii modulates peripheral blood natural killer cell proliferation, cytokine secretion and cytotoxicity
Cited by: 7
Author(s): Swee Keong Yeap, Abdul Rahman Omar, Wan Yong Ho, Boon Kee Beh, Abdul Manaf Ali, Noorjahan Banu Alitheen
Software Mentions: 2
Published: almost 11 years ago

10.1007/s00438-016-1171-6

Genome-wide identification of WRKY family genes in peach and analysis of WRKY expression during bud dormancy
Cited by: 43
Author(s): Min Chen, Qiuping Tan, Minghan Sun, Dongmei Li, Xiling Fu, Xiude Chen, Wei Xiao, Ling Li, Dongsheng Gao
Software Mentions: 2
Published: about 8 years ago

10.2196/13493

Supporting Self-Management in Bipolar Disorder: Mixed-Methods Knowledge Translation Study
Cited by: 23
Author(s): Erin E. Michalak, Emma Morton, Steven J. Barnes, Rachelle Hole, Greg Murray
Software Mentions: 2
Published: about 5 years ago

10.1186/s13567-017-0430-9

Permissiveness of bovine epithelial cells from lung, intestine, placenta and udder for infection with Coxiella burnetii
Cited by: 19
Author(s): Katharina Sobotta, Katharina Bonkowski, Elisabeth M. Liebler-Tenorio, Pierre Germon, Pascal Rainard, Nina Hambruch, Christiane Pfarrer, Ilse D. Jacobsen, Christian Menge
Software Mentions: 2
Published: about 7 years ago

10.1186/s12861-016-0107-z

The Akt signaling pathway is required for tissue maintenance and regeneration in planarians
Cited by: 37
Author(s): T. Harshani Peiris, Daniel M. Carter Ramirez, Paul G. Barghouth, Néstor J. Oviedo
Software Mentions: 2
Published: about 8 years ago

10.3389/fimmu.2017.00620

Molecular Signatures of Human Regulatory T Cells in Colorectal Cancer and Polyps
Cited by: 17
Author(s): Nor Adzimah Johdi, Kamel Ait-Tahar, Ismail Sagap, A. Rahman A. Jamal
Software Mentions: 2
Published: almost 7 years ago

10.1186/s12864-017-4099-2

Transcriptome profiling of antiviral immune and dietary fatty acid dependent responses of Atlantic salmon macrophage-like cells
Cited by: 42
Author(s): Khalil Eslamloo, Xi Xue, Jennifer R. Hall, Nicole C. Smith, Albert Caballero‐Solares, Christopher C. Parrish, Richard G. Taylor, Matthew L. Rise
Software Mentions: 2
Published: over 6 years ago

10.15252/emmm.201404459

Loss of TLR3 aggravates CHIKV replication and pathology due to an altered virus‐specific neutralizing antibody response
Cited by: 77
Author(s): Zhisheng Her, Terk-Shin Teng, Jeslin J. L. Tan, Teck‐Hui Teo, Yiu‐Wing Kam, Fok‐Moon Lum, Wendy W. L. Lee, Christelle Gabriel, Rossella Melchiotti, Anand Kumar Andiappan, Valeria Lulla, Aleksei Lulla, Mar Kyaw Win, Angela Chow, Subhra K. Biswas, Yee‐Sin Leo, Marc Lecuit, Andres Merits, Laurent Rénia, Lisa F. P. Ng
Software Mentions: 2
Published: over 9 years ago

10.3389/fendo.2020.575469

Increased Plasma Soluble Interleukin-2 Receptor Alpha Levels in Patients With Long-Term Type 1 Diabetes With Vascular Complications Associated With IL2RA and PTPN2 Gene Polymorphisms
Cited by: 3
Author(s): Magdalena Keindl, Olena Fedotkina, Elsa du Plessis, Ruchi Jain, Brith Bergum, Troels Mygind Jensen, Cleide Oliveira de Almeida Møller, Henrik Falhammar, Thomas Nyström, Sergiu‐Bogdan Catrina, Gun Jörneskog, Leif Groop, Mats Eliasson, Björn Eliasson, Kerstin Brismar, Peter M. Nilsson, Tore Julsrud Berg, Silke Appel, Valeriya Lyssenko
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0077575

Secreted Protein Acidic and Rich in Cysteine (SPARC) Exacerbates Colonic Inflammatory Symptoms in Dextran Sodium Sulphate-Induced Murine Colitis
Cited by: 29
Author(s): Yoke-Leng Ng, Borut Klopcic, Frances Lloyd, Cynthia H. Forrest, Wayne K. Greene, Ian C. Lawrance
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0011400

Modified Vaccinia Virus Ankara Exerts Potent Immune Modulatory Activities in a Murine Model
Cited by: 18
Author(s): Miriam Nörder, Pablo D. Becker, Ingo Drexler, Claudia Link, Volker Erfle, Carlos A. Guzmán
Software Mentions: 2
Published: almost 14 years ago

10.1155/2021/3917028

Deficiency of Antioxidative Paraoxonase 2 (Pon2) Leads to Increased Number of Phenotypic LT-HSCs and Disturbed Erythropoiesis
Cited by: 1
Author(s): Lisa Spiecker, Ines Witte, Julia Mehlig, Viral Shah, Markus Meyerhöfer, Patricia S Haehnel, Victoria Petermann, Andrea Schüler, Piyush More, Nina Cabezas-Wallscheid, Sven Horke, Andrea Pautz, Andreas Daiber, Daniel Sasca, Thomas Kindler, Hartmut Kleinert
Software Mentions: 2
Published: almost 3 years ago

10.1186/s13287-021-02236-6

Secreted factors from dental pulp stem cells improve Sjögren’s syndrome via regulatory T cell-mediated immunosuppression
Cited by: 25
Author(s): Mayu Matsumura-Kawashima, Kenichi Ogata, Masafumi Moriyama, Yasuki Murakami, Tatsuya Kawado, Seiji Nakamura
Software Mentions: 2
Published: about 3 years ago

10.3390/ijms19103043

Secondary Unconjugated Bile Acids Induce Hepatic Stellate Cell Activation
Cited by: 16
Author(s): Kunihiro Saga, Yukio Iwashita, Shinya Hidano, Yuiko Aso, Kenji Isaka, Yasutoshi Kido, Kazuhiro Tada, Hiroomi Takayama, Takashi Masuda, Teijiro Hirashita, Yuichi Endo, Masayuki Ohta, Takashi Kobayashi, Masafumi Ito
Software Mentions: 2
Published: over 5 years ago

10.1186/scrt14

Expression of migration-related genes is progressively upregulated in murine Lineage-Sca-1+c-Kit+ population from the fetal to adult stages of development
Cited by: 25
Author(s): Jesús Ciriza, Marcos E. García‐Ojeda
Software Mentions: 2
Published: about 14 years ago

10.3389/fimmu.2019.00612

Bovine Derived in vitro Cultures Generate Heterogeneous Populations of Antigen Presenting Cells
Cited by: 10
Author(s): Efrain Guzman, Myriam Pujol, Paolo Ribeca, María Montoya
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.ppat.1008554

The ATGL lipase cooperates with ABHD5 to mobilize lipids for hepatitis C virus assembly
Cited by: 21
Author(s): Gabrielle Vièyres, I. Reichert, Arnaud Carpentier, Florian W. R. Vondran, Thomas Pietschmann
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13287-017-0515-4

miR199a-3p regulates P53 by targeting CABLES1 in mouse cardiac c-kit+ cells to promote proliferation and inhibit apoptosis through a negative feedback loop
Cited by: 15
Author(s): Jingjin Liu, Yongshun Wang, Jinjin Cui, Meng Sun, Zhongyue Pu, Chao Wang, Wenjuan Du, Xinxin Liu, Jian Wu, Jun Hou, Shuo Zhang, Bo Yu
Software Mentions: 2
Published: almost 7 years ago

10.3390/ijms21228752

The Effect of Angiotensin II, Retinoic Acid, EGCG, and Vitamin C on the Cardiomyogenic Differentiation Induction of Human Amniotic Fluid-Derived Mesenchymal Stem Cells
Cited by: 4
Author(s): Monika Gasiūnienė, Elvina Valatkaitė, Aistė Navakauskaitė, Rūta Navakauskienė
Software Mentions: 2
Published: over 3 years ago

10.3389/fimmu.2021.723010

Immunomonitoring of Human Breast Milk Cells During HCMV-Reactivation
Cited by: 7
Author(s): Katrin Lazar, Thorsten Kussmann, Graham Pawelec, Simone Pöschel, Rangmar Goelz, Klaus Hamprecht, Kilian Wistuba‐Hamprecht
Software Mentions: 2
Published: over 2 years ago

10.1038/s41598-018-23837-x

KoVariome: Korean National Standard Reference Variome database of whole genomes with comprehensive SNV, indel, CNV, and SV analyses
Cited by: 38
Author(s): Jung-Eun Kim, Jessica A. Weber, Sungwoong Jho, Jinho Jang, Je Hoon Jun, Yun Sung Cho, Hak Min Kim, Hyunho Kim, Yumi Kim, Ok Sung Chung, Chang Geun Kim, Hye Jin Lee, Byung Chul Kim, Kyudong Han, In Song Koh, Kyun Shik Chae, Semin Lee, Jeremy S. Edwards, Jong Bhak
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-018-31726-6

High-Reynolds Microfluidic Sorting of Large Yeast Populations
Cited by: 7
Author(s): Eliezer Keinan, Ayelet Chen Abraham, Anna Cohen, Alexander I. Alexandrov, Reshef Mintz, Merav Cohen, Dana Reichmann, Daniel Kaganovich, Yaakov Nahmias
Software Mentions: 2
Published: over 5 years ago

10.1186/s13287-020-1558-5

Can supernatant from immortalized adipose tissue MSC replace cell therapy? An in vitro study in chronic wounds model
Cited by: 27
Author(s): Honorata Kraśkiewicz, Maria Paprocka, Aleksandra Bielawska‐Pohl, Agnieszka Krawczenko, Kinga Panek, Judyta Kaczyńska, Agnieszka Szyposzyńska, Mateusz Psurski, Piotr Kuropka, Aleksandra Klimczak
Software Mentions: 2
Published: over 4 years ago

10.3390/ijms17091386

Antiviral Activity of a Novel Compound CW-33 against Japanese Encephalitis Virus through Inhibiting Intracellular Calcium Overload
Cited by: 14
Author(s): Su-Hua Huang, Jin‐Cherng Lien, Chao‐Jung Chen, Yu-Ching Liu, Ching-Ying Wang, Chia-Fong Ping, Yu‐Fong Lin, An‐Cheng Huang, Cheng‐Wen Lin
Software Mentions: 2
Published: over 7 years ago

10.3390/ijms19103242

Anti-Angiogenic miR-222, miR-195, and miR-21a Plasma Levels in T1DM Are Improved by Metformin Therapy, Thus Elucidating Its Cardioprotective Effect: The MERIT Study
Cited by: 20
Author(s): Fahad Ahmed, Sherin Bakhashab, Inda T Bastaman, Rachel E Crossland, Michael Glanville
Software Mentions: 2
Published: over 5 years ago

10.3390/biology10060511

Diversity of Rainbow Trout Blood B Cells Revealed by Single Cell RNA Sequencing
Cited by: 15
Author(s): Pedro Perdiguero, Esther Morel, Carolina Tafalla
Software Mentions: 2
Published: almost 3 years ago

10.3389/fimmu.2020.589866

miRNA Regulation of NK Cells Antiviral Response in Children With Severe and/or Recurrent Herpes Simplex Virus Infections
Cited by: 4
Author(s): Marzena Lenart, Edyta Działo, Anna Kluczewska, Kazimierz Węglarczyk, Anna Szaflarska, Magdalena Rutkowska-Zapała, Marcin Surmiak, Marek Sanak, Anna Pituch‐Noworolska, Maciej Siedlar
Software Mentions: 2
Published: over 3 years ago

10.7150/thno.44298

Signal amplification and quantification on lateral flow assays by laser excitation of plasmonic nanomaterials
Cited by: 56
Author(s): Haihang Ye, Yaning Liu, Li Zhan, Yilin Liu, Zhenpeng Qin
Software Mentions: 2
Published: over 4 years ago

10.1155/2017/1468957

Cytotoxicity and Proapoptotic Effects of<i>Allium atroviolaceum</i>Flower Extract by Modulating Cell Cycle Arrest and Caspase-Dependent and<i>p53</i>-Independent Pathway in Breast Cancer Cell Lines
Cited by: 19
Author(s): Sedigheh Khazaei, Roslida Abdul Hamid, Vasudevan Ramachandran, Mohd Esa Norhaizan, Ashok Kumar Pandurangan, Fatemeh Danazadeh, Patimah Ismail
Software Mentions: 2
Published: over 7 years ago

10.1016/j.molmet.2019.03.012

Dietary calories and lipids synergistically shape adipose tissue cellularity during postnatal growth
Cited by: 14
Author(s): Irina Meln, Gretchen Wolff, Thomas Gajek, Johanna Koddebusch, Sarah Lerch, Liza Harbrecht, Wujun Hong, Irem Bayindir‐Buchhalter, Damir Krunic, Hellmut G. Augustin, Alexandros Vegiopoulos
Software Mentions: 2
Published: almost 5 years ago

10.3389/fimmu.2019.02562

Live Attenuated Salmonella enterica Expressing and Releasing Cell-Permeable Bax BH3 Peptide Through the MisL Autotransporter System Elicits Antitumor Activity in a Murine Xenograft Model of Human B Non-hodgkin's Lymphoma
Cited by: 9
Author(s): Armando Alfredo Mateos-Chávez, Paola Muñoz-López, Elayne Irene Becerra-Báez, Luis Fernando Flores-Martínez, Diego Prada‐Gracia, Liliana M. Moreno‐Vargas, Guillermina Baay-Guzmán, Uriel Juárez-Hernández, Bibiana Chávez-Munguı́a, Lourdes Cabrera-Muñóz, Rosendo Lurı́a-Pérez
Software Mentions: 2
Published: over 4 years ago

10.3390/biomedicines9040332

Functional Flow Cytometric Assay for Reliable and Convenient Heparin-Induced Thrombocytopenia Diagnosis in Daily Practice
Cited by: 7
Author(s): B. Tardy, Aurélie Montmartin, Michèle Piot, Martine Alhenc‐Gelas, Philippe Nguyên, Ismaı̈l Elalamy, Andreas Greinacher, Emmanuel de Maistre, Dominique Lasne, Marie‐Hélène Horellou, Grégoire Le Gal, Thomas Lecompte, Bernard Tardy
Software Mentions: 2
Published: about 3 years ago

10.1155/2019/3496836

FTY720 Effects on Inflammation and Liver Damage in a Rat Model of Renal Ischemia-Reperfusion Injury
Cited by: 4
Author(s): Anthony Foster, Diego Vicente, Nicholas Clark, Crystal Leonhardt, Eric A. Elster, Thomas A. Davis, M. J. Bradley
Software Mentions: 2
Published: about 5 years ago

10.1186/1471-2180-10-293

Identification of Lactobacillus plantarum genes modulating the cytokine response of human peripheral blood mononuclear cells
Cited by: 166
Author(s): Saskia van Hemert, Marjolein Meijerink, Douwe Molenaar, Peter A. Bron, Paul de Vos, Michiel Kleerebezem, Jerry M. Wells, Maria L. Marco
Software Mentions: 2
Published: over 13 years ago

10.1038/s42003-020-1027-9

Met-Flow, a strategy for single-cell metabolic analysis highlights dynamic changes in immune subpopulations
Cited by: 69
Author(s): Patricia J. Ahl, Richard A. Hopkins, Wen Wei Xiang, Bijin Au, Nivashini Kaliaperumal, Anna‐Marie Fairhurst, John E. Connolly
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0024378

Ecosystem Services in Conservation Planning: Targeted Benefits vs. Co-Benefits or Costs?
Cited by: 95
Author(s): Kai M. A. Chan, Lara Hoshizaki, Brian Klinkenberg
Software Mentions: 2
Published: over 12 years ago

10.1371/journal.pone.0020623

Evaluation of Cell Cycle Arrest in Estrogen Responsive MCF-7 Breast Cancer Cells: Pitfalls of the MTS Assay
Cited by: 64
Author(s): Eileen McGowan, Nikki Alling, Elise Jackson, Daniel Yagoub, Nikolas K. Haass, John D. Allen, Rosetta Martinello-Wilks
Software Mentions: 2
Published: almost 13 years ago

10.1186/s12964-018-0257-7

Kv1.3 channel blockade with the Vm24 scorpion toxin attenuates the CD4+ effector memory T cell response to TCR stimulation
Cited by: 19
Author(s): José Ignacio Veytia-Bucheli, Juana María Jiménez-Vargas, Erika Melchy-Pérez, Monserrat Alba Sandoval-Hernández, Lourival D. Possani, Yvonne Rosenstein
Software Mentions: 2
Published: almost 6 years ago

10.1371/journal.pone.0113278

Differential In Vivo Tumorigenicity of Distinct Subpopulations from a Luminal-Like Breast Cancer Xenograft
Cited by: 8
Author(s): Nirma Skrbo, Geir Olav Hjortland, Alexander Kristian, Ruth Holm, Silje Nord, Lina Prasmickaite, Olav Engebraaten, Gunhild Mari Mælandsmo, Thérese Sørlie, Kristin Andersen
Software Mentions: 2
Published: over 9 years ago

10.3390/pharmaceutics12050450

Recombinant Protein-Based Nanoparticles: Elucidating Their Inflammatory Effects In Vivo and Their Potential as a New Therapeutic Format
Cited by: 8
Author(s): Laia Gifre-Renom, Estefanía Ugarte-Berzal, Erik Martens, Lise Boon, Olivia Cano‐Garrido, Esther Martínez-Núñez, Teresa Luque, Ramon Roca-Pinilla, Óscar Conchillo-Solé, Neus Ferrer-Miralles, Antonio Villaverde, Elena García‐Fruitós, Anna Arı́s
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0247758

Serum β2-microglobulin levels in Coronavirus disease 2019 (Covid-19): Another prognosticator of disease severity?
Cited by: 10
Author(s): Walter Conca, Mayyadah Alabdely, Faisal Albaiz, Mary H. Foster, Maha Alamri, Morad Al-Kaff, Futwan Al‐Mohanna, Nicolaas Nagelkerke, Reem S. Almaghrabi
Software Mentions: 2
Published: about 3 years ago

10.1186/s12885-021-08641-7

Inhibition of STAT3 enhances sensitivity to tamoxifen in tamoxifen-resistant breast cancer cells
Cited by: 12
Author(s): Seo Yun Moon, Heejin Lee, Seoree Kim, Ji Hyung Hong, Sang Hoon Chun, Hee Yeon Lee, Keunsoo Kang, Ho Shik Kim, Hye Sung Won, Yoon Ho Ko
Software Mentions: 2
Published: almost 3 years ago

10.1371/journal.pone.0226444

Temporal and spatial modulation of the tumor and systemic immune response in the murine Gl261 glioma model
Cited by: 15
Author(s): Kelly McKelvey, Amanda L. Hudson, Ramyashree Prasanna Kumar, James S. Wilmott, Grace H. Attrill, Georgina V. Long, Richard A. Scolyer, Stephen Clarke, Helen Wheeler, Connie I. Diakos, Viive M. Howell
Software Mentions: 2
Published: about 4 years ago

10.3389/fimmu.2020.00011

Calreticulin Blockade Attenuates Murine Acute Lung Injury by Inducing Polarization of M2 Subtype Macrophages
Cited by: 50
Author(s): Zhilong Jiang, Zhihong Chen, Lu Hu, Lin Qiu, Liangliang Zhu
Software Mentions: 2
Published: over 4 years ago

10.1186/s12935-016-0287-4

Solamargine triggers cellular necrosis selectively in different types of human melanoma cancer cells through extrinsic lysosomal mitochondrial death pathway
Cited by: 43
Author(s): Sana S. Al Sinani, Elsadig A. Eltayeb, Brenda L. Coomber, Sirin A. Adham
Software Mentions: 1
Published: over 8 years ago

10.1155/2020/5640960

Frequent Recurrences of Genital Herpes Are Associated with Enhanced Systemic HSV-Specific T Cell Response
Cited by: 1
Author(s): Michal Holub, Alžběta Stráníková, Pavel Chalupa, Simona Arientová, K Roubalová, Ondřej Beran
Software Mentions: 1
Published: over 4 years ago

10.1186/s12865-021-00397-w

Neutrophil extracellular traps are present in the airways of ENaC-overexpressing mice with cystic fibrosis-like lung disease
Cited by: 17
Author(s): Samantha L. Tucker, Demba Sarr, Balázs Rada
Software Mentions: 1
Published: over 3 years ago

10.1186/bcr3192

Targeting triple-negative breast cancer cells with the histone deacetylase inhibitor panobinostat
Cited by: 214
Author(s): Chandra R. Tate, Lyndsay V. Rhodes, H. Chris Segar, Jennifer Driver, F. Nell Pounder, Matthew E. Burow, Bridgette M. Collins‐Burow
Software Mentions: 1
Published: almost 12 years ago

10.1186/s12865-018-0247-y

Pathogen recognition by NK cells amplifies the pro-inflammatory cytokine production of monocyte-derived DC via IFN-γ
Cited by: 12
Author(s): Tammy Oth, Thomas H. P. M. Habets, Wilfred T.V. Germeraad, Marijke I. Zonneveld, Gerard M.J. Bos, Joris Vanderlocht
Software Mentions: 1
Published: over 6 years ago

10.1186/s12885-018-4352-3

The regulation of combined treatment-induced cell death with recombinant TRAIL and bortezomib through TRAIL signaling in TRAIL-resistant cells
Cited by: 3
Author(s): Soo Bang Ryu, Yun Jeong Ahn, Chakeong Yoon, Jeong Hwan Chang, Yoonkyung Park, Tae‐Hyoung Kim, Amanda Howland, Cheryl A. Armstrong, Peter I. Song, Ae Ran Moon
Software Mentions: 1
Published: about 6 years ago

10.1111/bph.14583

1,2,3,4,6‐Penta‐<i>O</i>‐galloyl‐β‐<scp>d</scp>‐glucose modulates perivascular inflammation and prevents vascular dysfunction in angiotensin II‐induced hypertension
Cited by: 19
Author(s): T. Mikołajczyk, Ryszard Nosalski, Dominik Skiba, Joanna Kozioł, Magdalena Mazur, Amauri S. Justo‐Junior, Paulina Kowalczyk, Zofia Kuśmierczyk, Agata Schramm‐Luc, Kevin Luc, Pasquale Maffia, Delyth Graham, Anna K. Kiss, Marek Naruszewicz, Tomasz J. Guzik
Software Mentions: 1
Published: about 5 years ago

10.1042/BSR20130089

Oligomerization and Ca2+/calmodulin control binding of the ER Ca2+-sensors STIM1 and STIM2 to plasma membrane lipids
Cited by: 47
Author(s): Rajesh Bhardwaj, Hans‐Michael Müller, Walter Nickel, Matthias Seedorf
Software Mentions: 1
Published: over 10 years ago

10.3390/biom11091309

Coagulation Abnormalities in Renal Pathology of Chronic Kidney Disease: The Interplay between Blood Cells and Soluble Factors
Cited by: 9
Author(s): Efthimia Pavlou, Hara T. Georgatzakou, Sotirios P. Fortis, Konstantina A. Tsante, Andreas G. Tsantes, Efrosyni G. Nomikou, Athanasia Kapota, Dimitrios Petras, Maria S. Venetikou, Effie Papageorgiou, Marianna H. Antonelou, Anastasios G. Kriebardis
Software Mentions: 1
Published: over 2 years ago

10.3390/biom10050786

Oral Administration of Liquiritigenin Confers Protection from Atopic Dermatitis through the Inhibition of T Cell Activation
Cited by: 12
Author(s): Hyun Su Lee, Eun-Nam Kim, Gil‐Saeng Jeong
Software Mentions: 1
Published: about 4 years ago

10.1186/ar3926

Abrogated RANKL expression in properdin-deficient mice is associated with better outcome from collagen-antibody-induced arthritis
Cited by: 30
Author(s): Petya Dimitrova, Nina Ivanovska, Lyudmila Belenska, Viktoriya Milanova, Wilhelm Schwaeble, Cordula M. Stover
Software Mentions: 1
Published: over 12 years ago

10.3390/ani11010129

Immunomodulatory Effects of Dietary Phosphorus and Calcium in Two Strains of Laying Hens
Cited by: 10
Author(s): Tanja Hofmann, Sonja Schmucker, Vera Sommerfeld, Korinna Huber, M. Rodehutscord, Volker Stefanski
Software Mentions: 1
Published: over 3 years ago

10.3390/biomedicines9081017

Disease-Modifying Potential of Metformin and Alendronate in an Experimental Mouse Model of Osteoarthritis
Cited by: 8
Author(s): Lyudmila Belenska-Todorova, Sevdalina Nikolova Lambova, Stela Stoyanova, Еlenka Georgieva, Tsvetelina Batsalova, Dzhemal Moten, Desislava Kolchakova, Balik Dzhambazov
Software Mentions: 1
Published: almost 3 years ago

10.3390/biomedicines9030296

An Optimized and Standardized Rapid Flow Cytometry Functional Method for Heparin-Induced Thrombocytopenia
Cited by: 7
Author(s): Anne Runser, Caroline Schaning, Frédéric Allemand, Jean Amiral
Software Mentions: 1
Published: about 3 years ago

10.1186/s12902-020-00629-x

Long-term preoperative glycemic control restored the perioperative neutrophilic phagocytosis activity in diabetic mice
Cited by: 2
Author(s): Daichi Fujimoto, Yuki Nomura, Moritoki Egi, Norihiko Obata, Satoshi Mizobuchi
Software Mentions: 1
Published: over 3 years ago

10.1155/2015/748681

An Effective Big Data Supervised Imbalanced Classification Approach for Ortholog Detection in Related Yeast Species
Cited by: 15
Author(s): Deborah Galpert Cañizares, Sara del Río, Francisco Herrera, Evys Ancede-Gallardo, Agostinho Antunes, Guillermı́n Agüero-Chapin
Software Mentions: 1
Published: over 9 years ago

10.1186/s13075-014-0444-x

Expansion of regulatory GITR+CD25low/-CD4+ T cells in systemic lupus erythematosus patients
Cited by: 39
Author(s): Giuseppe Nocentini, Alessia Alunno, Maria Grazia Petrillo, Onelia Bistoni, Elena Bartoloni, Sara Caterbi, Simona Ronchetti, Graziella Migliorati, Carlo Riccardi, Roberto Gerli
Software Mentions: 1
Published: over 9 years ago

10.1155/2014/104658

Telemonitoring with respect to Mood Disorders and Information and Communication Technologies: Overview and Presentation of the PSYCHE Project
Cited by: 23
Author(s): Hervé Javelot, Anne Spadazzi, Luisa Weiner, S. Garcia, Claudio Gentili, Markus Kosel, Gilles Bertschy
Software Mentions: 1
Published: over 10 years ago

10.1155/2019/4650695

Oxaliplatin Treatment Alters Systemic Immune Responses
Cited by: 29
Author(s): Vanesa Stojanovska, Monica D. Prakash, Rachel M. McQuade, Sarah Fraser, Vasso Apostolopoulos, Samy Sakkal, Kulmira Nurgali
Software Mentions: 1
Published: over 5 years ago

10.1186/s12906-020-02944-1

Distinct anti-proliferative effects of herbal melanin on human acute monocytic leukemia THP-1 cells and embryonic kidney HEK293 cells
Cited by: 12
Author(s): Adila El‐Obeid, Hala Alajmi, Mashael Harbi, Wesam Bin Yahya, Hamad Al-Eidi, Monira Alaujan, Abdul Haseeb, Thadeo Trivilegio, Alshaimaa Alhallaj, Saleh Alghamdi, Abdul-Wali Ajlouni, Sabine Matou‐Nasri
Software Mentions: 1
Published: almost 4 years ago

10.3390/pathogens10060703

Cystic Fibrosis Sputum Impairs the Ability of Neutrophils to Kill Staphylococcus aureus
Cited by: 5
Author(s): Kayla Fantone, Samantha L. Tucker, Arthur S. Miller, Ruchi Yadav, Eryn E. Bernardy, Rachel Fricker, Arlene A. Stecenko, Joanna B. Goldberg, Balázs Rada
Software Mentions: 1
Published: almost 3 years ago

10.3390/biology9040066

Role of PA2G4P4 pseudogene in bladder cancer tumorigenesis
Cited by: 5
Author(s): Laura Pisapia, Sara Terreri, Pasquale Barba, Marianna Mastroianni, Maria Donnini, Vincenzo Mercadante, Alessandro Palmieri, Paolo Verze, Vincenzo Mirone, Vincenzo Altieri, Gianluigi Califano, Giovanna L. Liguori, Maria Strazzullo, Amelia Cimmino, Giovanna Del Pozzo
Software Mentions: 1
Published: about 4 years ago

10.1186/1472-6882-11-101

Developments on drug discovery and on new therapeutics: highly diluted tinctures act as biological response modifiers
Cited by: 15
Author(s): Carolina Camargo de Oliveira, Ana Paula Ressetti Abud, Simone Martins de Oliveira, Fernando de Souza Fonseca Guimarães, Lucas Ferrari de Andrade, Rosse Marye Bernardi, Ediely L de O Coletto, Diogo Kuczera, Eneida Janiscki Da Lozzo, Jenifer Pendiuk Gonçalves, Edvaldo da Silva Trindade, Dorly de Freitas Buchi
Software Mentions: 1
Published: over 12 years ago

10.1186/ar2437

Therapeutic effects of antibodies to tumor necrosis factor-α, interleukin-6 and cytotoxic T-lymphocyte antigen 4 immunoglobulin in mice with glucose-6-phosphate isomerase induced arthritis
Cited by: 44
Author(s): Isao Matsumoto, Hua Zhang, Takanori Yasukochi, Keiichi Iwanami, Yôko Tanaka, Akira Inoue, Daisuke Goto, Satoshi Ito, Akito Tsutsumi, Takayuki Sumida
Software Mentions: 1
Published: over 16 years ago

10.1186/s13223-017-0193-x

Systemic mastocytosis with KIT V560G mutation presenting as recurrent episodes of vascular collapse: response to disodium cromoglycate and disease outcome
Cited by: 5
Author(s): Iolanda Conde-Fernandes, Rita Sampaio, Filipa Moreno, José Palla Garcia, Maria dos Anjos Teixeira, Inês Freitas, Esmeralda Neves, María Jara‐Acevedo, Luís Escribano, Margarida Lima
Software Mentions: 1
Published: about 7 years ago

10.1002/advs.201700029

Recent Progress on Piezoelectric and Triboelectric Energy Harvesters in Biomedical Systems
Cited by: 369
Author(s): Qiang Zheng, Bojing Shi, Li Zhou, Zhong Lin Wang
Software Mentions: 1
Published: about 7 years ago

10.1186/s12989-018-0268-y

Calcium-dependent cyto- and genotoxicity of nickel metal and nickel oxide nanoparticles in human lung cells
Cited by: 64
Author(s): Sebastiano Di Bucchianico, Anda R. Gliga, Emma Åkerlund, Sara Skoglund, Inger Odnevall Wallinder, Bengt Fadeel, Hanna Karlsson
Software Mentions: 1
Published: almost 6 years ago

10.3390/biology10020141

Cytochalasin B-Induced Membrane Vesicles from Human Mesenchymal Stem Cells Overexpressing IL2 Are Able to Stimulate CD8+ T-Killers to Kill Human Triple Negative Breast Cancer Cells
Cited by: 21
Author(s): Daria S. Chulpanova, Zarema Gilazieva, Sevindzh K. Kletukhina, Alexander Aimaletdinov, Ekaterina Garanina, Victoria James, Albert A. Rizvanov, Valeriya V. Solovyeva
Software Mentions: 1
Published: over 3 years ago

10.3390/v13071191

Development of a Sensitive Detection Method for Alphaviruses and Its Use as a Virus Neutralization Assay
Cited by: 4
Author(s): Christin Schmidt, Mario Perković, Barbara S. Schnierle
Software Mentions: 1
Published: almost 3 years ago

10.3390/v12020228

A Novel Role for PX, a Structural Protein of Fowl Adenovirus Serotype 4 (FAdV4), as an Apoptosis-Inducer in Leghorn Male Hepatocellular Cell
Cited by: 7
Author(s): Ming Zhao, Xueyan Duan, Yongqiang Wang, Li Gao, Hong Cao, Xiaoqi Li, Shijun Zheng
Software Mentions: 1
Published: over 4 years ago

10.3390/pathogens4040739

Identification of Epstein-Barr Virus Replication Proteins in Burkitt’s Lymphoma Cells
Cited by: 16
Author(s): Chris Traylen, Sharada Ramasubramanyan, Jianmin Zuo, Martin Rowe, Rajaei Al-Mohammad, Kate J Heesom, Steve M. M. Sweet, David A. Matthews, Alison J. Sinclair
Software Mentions: 1
Published: over 8 years ago

10.3390/pathogens10091154

An Exaggerated Immune Response in Female BALB/c Mice Controls Initial Toxoplasma gondii Multiplication but Increases Mortality and Morbidity Relative to Male Mice
Cited by: 3
Author(s): Rasha Alonaizan, Stuart Woods, Kerrie E Hargrave, Craig W. Roberts
Software Mentions: 1
Published: over 2 years ago

10.1242/bio.031476

Streamlined histone-based fluorescence lifetime imaging microscopy (FLIM) for studying chromatin organisation
Cited by: 11
Author(s): Alice Sherrard, Paul Bishop, Mélanie Panagi, Maria Beatriz Villagomez, Dominic Alibhai, Abderrahmane Kaidi
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.6114

Elevated CD3^lowdouble negative T lymphocyte is associated with pneumonia and its severity in pediatric patients
Cited by: 2
Author(s): Ying Wang, Weiyue Lu, Aipeng Li, Zhengyi Sun
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.10890

Use of conditioned media (CM) and xeno-free serum substitute on human adipose-derived stem cells (ADSCs) differentiation into urothelial-like cells
Cited by: 2
Author(s): Ban Al Kurdi, Nidaa A. Ababneh, Nizar Mohammad Abuharfeil, Saddam Al Demour, Abdalla Awidi
Software Mentions: 1
Published: about 3 years ago

10.1186/s12906-017-1594-6

Promotion of HepG2 cell apoptosis by flower of Allium atroviolaceum and the mechanism of action
Cited by: 26
Author(s): Sedigheh Khazaei, Roslida Abdul Hamid, Nurulaidah Esa, Vasudevan Ramachandran, Farizeh Aalam, Ali Etemad, Patimah Ismail
Software Mentions: 1
Published: over 7 years ago