pypi: Library | Projects | Ecosyste.ms: Papers

10.1007/s41114-018-0015-6

Computer algebra in gravity research
Cited by: 20
Author(s): Malcolm MacCallum
Software Mentions: 13
Published: over 6 years ago

RGG: A general GUI Framework for R scripts
Cited by: 7
Author(s): Ilhami Visne, Erkan Dilaveroǧlu, Klemens Vierlinger, Martin Lauss, Ahmet Yıldız, Andreas Weinhäusel, Christa Noehammer, Friedrich Leisch, Albert Kriegner
Software Mentions: 11
Published: almost 16 years ago

10.1371/journal.pone.0208126

Modeling the spatial and seasonal distribution of offshore recreational vessels in the southeast United States
Cited by: 5
Author(s): Nancy Montes, Robert Swett, Robert Ahrens
Software Mentions: 9
Published: about 6 years ago

10.1107/S2059798319011471

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
Cited by: 3,483
Author(s): Dorothée Liebschner, Pavel V. Afonine, Matthew L. Baker, G. Bunkóczi, V.B. Chen, Tristan I. Croll, Bradley J. Hintze, Li Wei Hung, Swati Jain, Airlie J. McCoy, Nigel W. Moriarty, Robert D. Oeffner, Billy K. Poon, Michael G. Prisant, R.J. Read, Jane S. Richardson, David C. Richardson, Massimo Sammito, Oleg Sobolev, Duncan H. Stockwell, Thomas C. Terwilliger, Alexandre Urzhumtsev, Lizbeth L. Videau, Christopher J. Williams, Paul D. Adams
Software Mentions: 8
Published: about 5 years ago

10.3390/metabo11030163

The mwtab Python Library for RESTful Access and Enhanced Quality Control, Deposition, and Curation of the Metabolomics Workbench Data Repository
Cited by: 10
Author(s): Christian D. Powell, Hunter N. B. Moseley
Software Mentions: 7
Published: almost 4 years ago

10.1186/1471-2105-10-S14-S6

Scratchpads: a data-publishing framework to build, share and manage information on the diversity of life
Cited by: 30
Author(s): Vincent Smith, Simon Rycroft, Kehan Harman, Ben Scott, David Roberts
Software Mentions: 6
Published: about 15 years ago

10.1186/s13717-020-00255-4

Current and near-term advances in Earth observation for ecological applications
Cited by: 75
Author(s): Susan L. Ustin, Elizabeth M. Middleton
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pone.0071745

Impact of Library Preparation on Downstream Analysis and Interpretation of RNA-Seq Data: Comparison between Illumina PolyA and NuGEN Ovation Protocol
Cited by: 20
Author(s): Zhifu Sun, Yan W. Asmann, Asha Nair, Yuji Zhang, Liguo Wang, Krishna R. Kalari, Aditya Bhagwate, Tiffany R. Baker, Jennifer M. Carr, Jean Pierre A. Kocher, Edith A. Perez, E. Aubrey Thompson
Software Mentions: 6
Published: over 11 years ago

10.1371/journal.pcbi.1006581

Efficient pedigree recording for fast population genetics simulation
Cited by: 112
Author(s): Jerome Kelleher, Kevin R. Thornton, Jaime Ashander, Peter L. Ralph
Software Mentions: 6
Published: about 6 years ago

10.7554/eLife.35854

GABA, not BOLD, reveals dissociable learning-dependent plasticity mechanisms in the human brain
Cited by: 36
Author(s): Polytimi Frangou, Marta Correia, Zoe Kourtzi
Software Mentions: 5
Published: about 6 years ago

10.1186/s12889-016-3692-7

Extreme weather events in developing countries and related injuries and mental health disorders - a systematic review
Cited by: 56
Author(s): Elisabeth Rataj, Katharina Kunzweiler, Susan Garthus-Niegel
Software Mentions: 5
Published: about 8 years ago

10.1186/s13104-019-4210-7

Development and use of a flexible data harmonization platform to facilitate the harmonization of individual patient data for meta-analyses
Cited by: 11
Author(s): Joeri Kalter, Maike G. Sweegers, Irma M. Verdonck‐de Leeuw, Johannes Brug, Laurien M. Buffart
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pcbi.1000204

Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web
Cited by: 151
Author(s): Duncan Hull, Steve Pettifer, Douglas B. Kell
Software Mentions: 5
Published: about 16 years ago

10.1038/s41598-018-24126-3

Metabarcoding analysis of strongylid nematode diversity in two sympatric primate species
Cited by: 31
Author(s): Barbora Pafčo, Dagmar Čížková, Jakub Kreisinger, Hideo Hasegawa, Peter Vallo, Kathryn Shutt, Angelique Todd, Klára J. Petrželková, David Modrý
Software Mentions: 5
Published: over 6 years ago

10.1186/1759-8753-5-13

“One code to find them all”: a perl tool to conveniently parse RepeatMasker output files
Cited by: 129
Author(s): Marc Bailly‐Bechet, Annabelle Haudry, Emmanuelle Lerat
Software Mentions: 5
Published: over 10 years ago

10.1038/s41598-020-69298-z

Standardization of brain MR images across machines and protocols: bridging the gap for MRI-based radiomics
Cited by: 121
Author(s): Alexandre Carré, G. Klausner, Myriam Edjlali, Marvin Lerousseau, Jade Briend-Diop, Roger Sun, Samy Ammari, Sylvain Reuzé, É. Alvarez Andres, Théo Estienne, S. Niyoteka, Enzo Battistella, Maria Vakalopoulou, Frédéric Dhermain, Nikos Paragios, Éric Deutsch, Catherine Oppenheim, Johan Pallud, Charlotte Robert
Software Mentions: 5
Published: over 4 years ago

10.3389/fncir.2014.00068

Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits
Cited by: 204
Author(s): Kenneth J. Hayworth, Josh Morgan, Richard Schalek, Daniel R. Berger, David G. C. Hildebrand, Jeff W. Lichtman
Software Mentions: 4
Published: over 10 years ago

10.3390/s19204402

A Physical Model-Based Observer Framework for Nonlinear Constrained State Estimation Applied to Battery State Estimation
Cited by: 8
Author(s): Jonathan Brembeck
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pcbi.1003493

A Novel Bayesian Method for Detection of APOBEC3-Mediated Hypermutation and Its Application to Zoonotic Transmission of Simian Foamy Viruses
Cited by: 16
Author(s): F. A. Matsen, Christopher T Small, Khanh Soliven, Gregory Engel, Mohammed Mostafa Feeroz, Xiaoxing Wang, Karen L. Craig, Md. Rakib Hasan, Michael Emerman, Maxine L. Linial, Lisa Jones‐Engel
Software Mentions: 4
Published: almost 11 years ago

10.1098/rsfs.2019.0119

Towards blood flow in the virtual human: efficient self-coupling of HemeLB
Cited by: 9
Author(s): J. W. S. McCullough, Robin A. Richardson, Alex Patronis, René Halver, Ryan Marshall, Martin Ruefenacht, Brian J. N. Wylie, Thomas Odaker, Michael Wiedemann, Bryn Lloyd, Esra Neufeld, Godehard Sutmann, Anthony Skjellum, Dieter Kranzlmüller, Peter V. Coveney
Software Mentions: 4
Published: about 4 years ago

10.1186/2041-1480-5-41

Structuring research methods and data with the research object model: genomics workflows as a case study
Cited by: 26
Author(s): Kristina Hettne, Harish Dharuri, Jun Zhao, Katy Wolstencroft, Khalid Belhajjame, Stian Soiland‐Reyes, Eleni Mina, Mark Thompson, Don Cruickshank, L. Verdes–Montenegro, Julián Garrido, David De Roure, Óscar Corcho, Graham Klyne, Reinout van Schouwen, Peter A C ‘t Hoen, Sean Bechhofer, Carole Goble, Marco Roos
Software Mentions: 4
Published: over 10 years ago

10.1083/jcb.202004010

mTORC1 activity is supported by spatial association with focal adhesions
Cited by: 35
Author(s): Yoana Rabanal‐Ruiz, Adam Byron, Alexander Wirth, Ralitsa R. Madsen, Lucia Sedlackova, Graeme Hewitt, Glyn Nelson, Julian Stingele, Jimi Wills, Tong Zhang, André Zeug, Reinhard Fässler, Bart Vanhaesebroeck, Oliver D.K. Maddocks, Evgeni Ponimaskin, Bernadette Carroll, Viktor I. Korolchuk
Software Mentions: 4
Published: almost 4 years ago

10.1186/s13643-020-01360-3

The impact of vitamin D food fortification and health outcomes in children: a systematic review and meta-regression
Cited by: 19
Author(s): Reem Al Khalifah, Rawan Alsheikh, Yossef Alnasser, Rana Alsheikh, Nora Alhelali, Ammar Naji, Nouf Al Backer
Software Mentions: 4
Published: over 4 years ago

10.1002/hbm.25301

White matter integrity and structural brain network topology in cerebral small vessel disease: The Hamburg city health study
Cited by: 14
Author(s): Benedikt M. Frey, Marvin Petersen, Eckhard Schlemm, Christine M. Mayer, Uta Hanning, Kristin Engelke, Jens Fiehler, Katrin Borof, Annika Jagodzinski, Christian Gerloff, Götz Thomalla, Bastian Cheng
Software Mentions: 4
Published: about 4 years ago

10.1007/s10329-021-00927-5

Home range size in central chimpanzees (Pan troglodytes troglodytes) from Loango National Park, Gabon
Cited by: 4
Author(s): Laura Martínez-Íñigo, Pauline Baas, Harmonie Klein, Simone Pika, Tobias Deschner
Software Mentions: 4
Published: over 3 years ago

10.3389/fnhum.2020.00346

Brain Network Modularity Predicts Improvements in Cognitive and Scholastic Performance in Children Involved in a Physical Activity Intervention
Cited by: 18
Author(s): Laura Chaddock-Heyman, Timothy B. Weng, Caitlin Kienzler, Robert Weisshappel, Eric S. Drollette, Lauren B. Raine, Daniel R. Westfall, Shih‐Chun Kao, Pauline L. Baniqued, Darla M. Castelli, Charles H. Hillman, Arthur F. Kramer
Software Mentions: 4
Published: over 4 years ago

10.3897/BDJ.3.e5848

PESI - a taxonomic backbone for Europe
Cited by: 19
Author(s): Yde de Jong, Juliana H.M. Kouwenberg, Louis Boumans, Charles G. Hussey, Roger Hyam, Nicky Nicolson, Paul M. Kirk, Alan Paton, Ellinor Michel, Michael D. Guiry, Phillip S Boegh, Henrik Ærenlund Pedersen, Henrik Enghoff, Eckhard Von Raab-Straube, Anton Güntsch, Marc Geoffroy, Andreas Müller, Andreas Kohlbecker, Walter G. Berendsohn, Ward Appeltans, Christos Arvanitidis, B. Vanhoorne, Joram Declerck, L. Vandepitte, F. Hernández, Róisín Nash, Mark J. Costello, David Ouvrard, Pascale Bezard-Falgas, Thierry Bourgoin, Florian T. Wetzel, Falko Glöckler, Günther Korb, Caroline Ring, Gregor Hagedorn, Christoph L. Häuser, Nihat Aktaç, Ahmet Asan, Adorian Ardelean, Paulo A. V. Borges, Dhimiter Dhora, Hasmik Khachatryan, Michael Malicky, Shaig Ibrahimov, Alexander V. Tuzikov, Aaike De Wever, Snejana Moncheva, Nikolaï Spassov, Karel Chobot, Alexi Popov, Igor Boršić, Spyros Sfenthourakis, Urmas Kõljalg, Pertti Uotila, Olivier Gargominy, Jean‐Claude Dauvin, David Tarkhnishvili, Giorgi Chaladze, Michael Tuerkay, Anastasios Legakis, László Peregovits, Gestur Guðmundsson, Erling Ólafsson, Liam Lysaght, Bella S. Galil, Francesco María Raimondo, Gianniantonio Domina, Fabio Stoch, Alessandro Minelli, Voldermars Spungis, Eduardas Budrys, Sergej Olenin, Armand Turpel, Tania J. Walisch, Vladimir Krpach, Marie Therese Gambin, Laurenția Ungureanu, Gordan S. Karaman, R.M.J.C. Kleukers, Elisabeth Stur, Kaare Aagaard, Nils Valland, Toril Loennechen Moen, Wiesław Bogdanowicz, Piotr Tykarski, Jan Marcin Węsławski, Monika Kędra, António M. de Frias Martins, António Domingos Abreu, Ricardo Silva, С. Г. Медведев, Alexander Ryss, Smiljka Šimić, Karol Marhold, Eduard Stloukal, Davorin Tome, Marian A. Ramos, B. Valdés, Francisco José Pina, S. Kullander, Anders Telenius, Yves Gonseth, Pascal Tschudin, O. A. Sergeyeva, V. Vladymyrov, Volodymyr Rizun, Chris Raper, Dan Lear, Pavel Stoev, Lyubomir Penev, Ana Casino Rubio, Thierry Backeljau, Hannu Saarenmaa, S.A. Ulenberg
Software Mentions: 4
Published: about 9 years ago

10.3389/fped.2017.00159

Resting-State Functional Connectivity in the Infant Brain: Methods, Pitfalls, and Potentiality
Cited by: 30
Author(s): Chandler R. L. Mongerson, Russell W. Jennings, David Borsook, Lino Becerra, Dusica Bajic
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0089456

A Semi-Automated Pipeline for the Segmentation of Rhesus Macaque Hippocampus: Validation across a Wide Age Range
Cited by: 8
Author(s): Michael R. Hunsaker, David G. Amaral
Software Mentions: 4
Published: almost 11 years ago

10.3758/s13428-020-01501-5

Realistic precision and accuracy of online experiment platforms, web browsers, and devices
Cited by: 114
Author(s): Alexander Anwyl-Irvine, Edwin S. Dalmaijer, Nick Hodges, Jo K Evershed
Software Mentions: 4
Published: about 4 years ago

10.1186/s12859-019-2843-0

The Kendrick modelling platform: language abstractions and tools for epidemiology
Cited by: 6
Author(s): Thi Mai Anh Bui, Nick Papoulias, Serge Stinckwich, Mikal Ziane, Benjamín Roche
Software Mentions: 3
Published: over 5 years ago

10.3389/fnhum.2020.509258

White Matter Neuroplasticity: Motor Learning Activates the Internal Capsule and Reduces Hemodynamic Response Variability
Cited by: 16
Author(s): Tory Frizzell, Lukas A. Grajauskas, Careesa C. Liu, Sujoy Ghosh Hajra, Xiaowei Song
Software Mentions: 3
Published: about 4 years ago

10.3389/fneur.2017.00246

Autonomic Function Impairment and Brain Perfusion Deficit in Parkinson’s Disease
Cited by: 18
Author(s): Wei Che Lin, Pei Chin Chen, Chih Cheng Huang, Nai‐Wen Tsai, Hsiu-Ling Chen, Hung-Chen Wang, Kun Hsien Chou, Meng Hsiang Chen, Yi Wen Chen, Cheng Hsien Lu
Software Mentions: 3
Published: over 7 years ago

10.3389/fneur.2018.00025

Altered Brain Functional Connectome in Migraine with and without Restless Legs Syndrome: A Resting-State Functional MRI Study
Cited by: 25
Author(s): Fu‐Chi Yang, Kun Hsien Chou, Ai Ling Hsu, Jong Ling Fuh, Jiing Feng Lirng, Hung Wen Kao, Ching Po Lin, Shuu Jiun Wang
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12859-015-0548-6

MAESTRO - multi agent stability prediction upon point mutations
Cited by: 192
Author(s): Josef Laimer, Heidi Hofer, Marko Fritz, Stefan Wegenkittl, Peter Lackner
Software Mentions: 3
Published: over 9 years ago

10.3389/fneur.2021.632917

Increased Within-Network Functional Connectivity May Predict NEDA Status in Fingolimod-Treated MS Patients
Cited by: 3
Author(s): Claudia Piervincenzi, Nikolaos Petsas, Laura De Giglio, Maurizio Carmellini, Costanza Giannì, Silvia Tommasin, Carlo Pozzilli, P. Pantano
Software Mentions: 3
Published: almost 4 years ago

10.1111/1751-7915.12323

Optical scatter patterns facilitate rapid differentiation of <scp> E </scp> nterobacteriaceae on <scp> CHROMagar TM O </scp> rientation medium
Cited by: 9
Author(s): Atul K. Singh, Arun K. Bhunia
Software Mentions: 3
Published: about 9 years ago

10.3389/fgene.2021.662843

Effect of the Expression of ELOVL5 and IGFBP6 Genes on the Metastatic Potential of Breast Cancer Cells
Cited by: 5
Author(s): С. В. Никулин, Г. С. Захарова, Andrey Poloznikov, M. P. Raigorodskaya, Daniel Wicklein, Udo Schumacher, Stepan Nersisyan, Jonas Bergquist, Georgy Bakalkin, Л. В. Астахова, Alexander G. Tonevitsky
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pone.0211582

A rapid methods development workflow for high-throughput quantitative proteomic applications
Cited by: 16
Author(s): Yan Chen, Jonathan T. Vu, Mitchell G. Thompson, William A. Sharpless, Leanne Jade G. Chan, Jennifer Gin, Jay D. Keasling, Paul D. Adams, Young-Mo Kim
Software Mentions: 3
Published: almost 6 years ago

10.3758/s13415-021-00896-8

Processing of Task-Irrelevant Race Information is Associated with Diminished Cognitive Control in Black and White Individuals
Cited by: 2
Author(s): Estée Rubien-Thomas, Nia Berrian, Alessandra Cervera, Binyam Nardos, Alexandra O. Cohen, Ariel Lowrey, Natalie M. Daumeyer, Nicholas P. Camp, Brent Hughes, Jennifer L. Eberhardt, Kim Taylor-Thompson, Damien A. Fair, Jennifer A. Richeson, B. J. Casey
Software Mentions: 3
Published: over 3 years ago

10.1016/j.nutres.2021.05.005

Metabolomic changes in severe acute malnutrition suggest hepatic oxidative stress: a secondary analysis
Cited by: 5
Author(s): Mariana Parenti, Shannon McClorry, Elizabeth A. Maga, Carolyn M. Slupsky
Software Mentions: 3
Published: over 3 years ago

10.1093/bib/bbw114

Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences
Cited by: 444
Author(s): Claudia Manzoni, Demis A. Kia, Jana Vandrovcová, John Hardy, Nicholas W. Wood, Patrick A. Lewis, Raffaele Ferrari
Software Mentions: 3
Published: about 8 years ago

10.1177/0269881120944148

The acute effects of cannabidiol on the neural correlates of reward anticipation and feedback in healthy volunteers
Cited by: 11
Author(s): Will Lawn, J. P. Hill, Chandni Hindocha, Jocelyn Ll Yim, Yumeya Yamamori, Gus Jones, Hannah R Walker, Sebastian F. Green, Matthew B. Wall, Oliver Howes, H. Valerie Curran, Tom P. Freeman, Michael Bloomfield
Software Mentions: 3
Published: over 4 years ago

10.1107/S0108767310039140

Geometric properties of nucleic acids with potential for autobuilding
Cited by: 11
Author(s): Tim Gruene, George M. Sheldrick
Software Mentions: 3
Published: about 14 years ago

10.1186/1751-0473-3-11

OSPACS: Ultrasound image management system
Cited by: 2
Author(s): Will Stott, Andy Ryan, Ian Jacobs, Usha Menon, Conrad Bessant, Christopher Jones
Software Mentions: 3
Published: over 16 years ago

10.1038/s41598-018-24951-6

Resting-state fMRI study of brain activation using low-intensity repetitive transcranial magnetic stimulation in rats
Cited by: 24
Author(s): Bhedita J. Seewoo, Kirk W. Feindel, Sarah J. Etherington, Jennifer Rodger
Software Mentions: 3
Published: over 6 years ago

10.1002/hbm.24803

Accurate and robust segmentation of neuroanatomy in T1‐weighted MRI by combining spatial priors with deep convolutional neural networks
Cited by: 20
Author(s): Philip Novosad, Vladimir Fonov, D. Louis Collins, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 3
Published: about 5 years ago

10.1365/s40702-021-00729-9

Akzeptanz von Distance Working bei Führungskräften
Cited by: 0
Author(s): Florian Bergsleitner, David Rückel
Software Mentions: 3
Published: over 3 years ago

10.1186/s12874-021-01295-w

Quality assessment tools used in systematic reviews of in vitro studies: A systematic review
Cited by: 35
Author(s): Linh Tran, Dao Ngoc Hien Tam, Abdelrahman Elshafay, Thao Dang, Kenji Hirayama, Nguyen Tien Huy
Software Mentions: 3
Published: over 3 years ago

10.1534/g3.117.039974

A Bayesian Poisson-lognormal Model for Count Data for Multiple-Trait Multiple-Environment Genomic-Enabled Prediction
Cited by: 16
Author(s): Osval A. Montesinos-L֯ópez, Abelardo Montesinos‐López, José Crossa, Fernando H. Toledo, J. Cricelio Montesinos-López, Pawan K. Singh, Philomin Juliana, Josafhat Salinas‐Ruíz
Software Mentions: 3
Published: over 7 years ago

10.3389/fpsyg.2015.01024

Lagged and instantaneous dynamical influences related to brain structural connectivity
Cited by: 18
Author(s): Carmen Alonso-Montes, Ibai Diez, Lakhdar Remaki, Iñaki Escudero, Beatriz Mateos Goñi, Yves Rosseel, Daniele Marinazzo, Sebastiano Stramaglia, Jesús M. Cortes
Software Mentions: 3
Published: over 9 years ago

10.1093/gigascience/giy095

Draft genome assembly of the invasive cane toad, Rhinella marina
Cited by: 56
Author(s): Richard J. Edwards, Daniel Enosi Tuipulotu, Timothy G. Amos, Denis O’Meally, Mark F. Richardson, Tonia Russell, Marcelo Vallinoto, Miguel Carneiro, Nuno Ferrand, Marc R. Wilkins, Fernando Sequeira, Lee A. Rollins, Edward C. Holmes, Richard Shine
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2105-11-178

An overview of the CellML API and its implementation
Cited by: 69
Author(s): Andrew Miller, Justin Marsh, Adam Reeve, Alan Garny, Randall Britten, Matt D. B. Halstead, Jonathan Cooper, David Nickerson, Poul M. F. Nielsen
Software Mentions: 3
Published: over 14 years ago

10.3389/fnins.2021.625816

The Protective Effects of Perceived Control During Repeated Exposure to Aversive Stimuli
Cited by: 7
Author(s): Kainan S. Wang, Mauricio R. Delgado
Software Mentions: 3
Published: almost 4 years ago

10.3389/fnins.2020.00225

fMRI-Targeted High-Angular Resolution Diffusion MR Tractography to Identify Functional Language Tracts in Healthy Controls and Glioma Patients
Cited by: 25
Author(s): Francesco Sanvito, Eduardo Caverzasi, Marco Riva, Kesshi Jordan, Valeria Blasi, Paola Scifo, Antonella Iadanza, Sofia Crespi, Sara Cirillo, Alessandra Casarotti, Antonella Leonetti, Guglielmo Puglisi, Marco Grimaldi, Lorenzo Bello, Maria Luisa Gorno‐Tempini, Roland G. Henry, Andrea Falini, Antonella Castellano
Software Mentions: 3
Published: over 4 years ago

10.1093/gigascience/giab059

Desiderata for the development of next-generation electronic health record phenotype libraries
Cited by: 14
Author(s): Martin Chapman, Shahzad Mumtaz, Luke V. Rasmussen, Andreas Karwath, Georgios V. Gkoutos, Chuang Gao, Daniel Thayer, Jennifer A. Pacheco, Helen Parkinson, Rachel L. Richesson, Emily Jefferson, Spiros Denaxas, Vasa Ćurčin
Software Mentions: 3
Published: over 3 years ago

10.3389/fnhum.2013.00541

Both novelty and expertise increase action observation network activity
Cited by: 29
Author(s): Sook‐Lei Liew, S. Y. Tong, John L. Margetis, Lisa Aziz‐Zadeh
Software Mentions: 3
Published: almost 12 years ago

10.2196/21923

Smartphone Overuse and Visual Impairment in Children and Young Adults: Systematic Review and Meta-Analysis
Cited by: 35
Author(s): Jian Wang, Mei Li, Daqiao Zhu, Yang Cao
Software Mentions: 3
Published: about 4 years ago

10.3389/fninf.2020.00025

A Machine Learning Approach for the Differential Diagnosis of Alzheimer and Vascular Dementia Fed by MRI Selected Features
Cited by: 57
Author(s): Gloria Castellazzi, Maria Giovanna Cuzzoni, Matteo Cotta Ramusino, Daniele Martinelli, Federica M. Denaro, Antonio Ricciardi, P. Vitali, Nicoletta Anzalone, Sara Bernini, Fulvia Palesi, Elena Sinforiani, Alfredo Costa, Giuseppe Micieli, Egidio D’Angelo, Giovanni Magenes, C Wheeler-Kingshott
Software Mentions: 2
Published: over 4 years ago

10.3389/fneng.2014.00001

Low-latency multi-threaded processing of neuronal signals for brain-computer interfaces
Cited by: 7
Author(s): Julian Fischer, Tomislav Milekovic, Gerhard Schneider, Carsten Mehring
Software Mentions: 2
Published: almost 11 years ago

10.3389/fninf.2018.00002

Extremely Scalable Spiking Neuronal Network Simulation Code: From Laptops to Exascale Computers
Cited by: 83
Author(s): Jakob Jordan, Tammo Ippen, Moritz Helias, Itaru Kitayama, Mitsuhisa Sato, Jun Igarashi, Markus Diesmann, Susanne Kunkel
Software Mentions: 2
Published: almost 7 years ago

10.3389/fmicb.2016.00593

Intestinal Microbiota of Broiler Chickens As Affected by Litter Management Regimens
Cited by: 87
Author(s): Lingling Wang, M. S. Lilburn, Zhongtang Yu
Software Mentions: 2
Published: over 8 years ago

10.3389/fninf.2015.00017

A reconfigurable visual-programming library for real-time closed-loop cellular electrophysiology
Cited by: 9
Author(s): István Bíró, Michèle Giugliano
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2164-9-580

Development and validation of a gene expression oligo microarray for the gilthead sea bream (Sparus aurata)
Cited by: 58
Author(s): Serena Ferraresso, Nicola Vitulo, Alba Nicoletta Mininni, Chiara Romualdi, Barbara Cardazzo, Enrico Negrisolo, Richard Reinhardt, Adelino V.M. Canário, Tomaso Patarnello, Luca Bargelloni
Software Mentions: 2
Published: about 16 years ago

10.1093/bioinformatics/btaa170

The Glycine Receptor Allosteric Ligands Library (GRALL)
Cited by: 13
Author(s): Adrien H. Cerdan, Marion Sisquellas, Gilberto Pereira, Diego E. B. Gomes, Jean‐Pierre Changeux, Marco Cecchini
Software Mentions: 2
Published: almost 5 years ago

10.3390/ani10081406

Uniform Manifold Approximation and Projection for Clustering Taxa through Vocalizations in a Neotropical Passerine (Rough-Legged Tyrannulet, Phyllomyias burmeisteri)
Cited by: 18
Author(s): Ronald M Parra-Hernández, Jorge I Posada-Quintero, Orlando Acevedo‐Charry, Hugo F. Posada-Quintero
Software Mentions: 2
Published: over 4 years ago

10.3389/fnhum.2015.00361

Dose-response relationships using brain–computer interface technology impact stroke rehabilitation
Cited by: 31
Author(s): Brittany M. Young, Zack Nigogosyan, Léo M. Walton, Alexander Remsik, Jie Song, Veena A. Nair, Marcus Tyler, Dorothy Farrar Edwards, Kristin Caldera, Justin A. Sattin, Justin Williams, Vivek Prabhakaran
Software Mentions: 2
Published: over 9 years ago

10.3389/fgene.2019.00188

Identification of a Functional Non-coding Variant in the GABAA Receptor α2 Subunit of the C57BL/6J Mouse Reference Genome: Major Implications for Neuroscience Research
Cited by: 51
Author(s): Megan K. Mulligan, Timothy Abreo, Sarah M. Neuner, Cory Parks, Christine Watkins, M. Trevor Houseal, Thomas Shapaker, Michael Hook, Haidong Tan, Xusheng Wang, Jesse Ingels, Junmin Peng, Lu Lu, Catherine C. Kaczorowski, Camron D. Bryant, Gregg E. Homanics, Robert W. Williams
Software Mentions: 2
Published: over 5 years ago

10.1155/2017/2824615

Association between Scale-Free Brain Dynamics and Behavioral Performance: Functional MRI Study in Resting State and Face Processing Task
Cited by: 6
Author(s): Masato Kasagi, Zirui Huang, Kosuke Narita, Hitoshi Shitara, Tomokazu Motegi, Yusuke Suzuki, Kazuyuki Fujihara, Sean Tanabe, Hirotaka Kosaka, Koichi Ujita, Masato Fukuda, Georg Northoff
Software Mentions: 2
Published: almost 8 years ago

10.3389/fnhum.2014.00440

Functional specialization of the left ventral parietal cortex in working memory
Cited by: 6
Author(s): Jennifer Langel, Jonathan G. Hakun, David C. Zhu, Susan M. Ravizza
Software Mentions: 2
Published: over 10 years ago

10.3389/fnagi.2020.559603

Dysfunction of the Glymphatic System Might Be Related to Iron Deposition in the Normal Aging Brain
Cited by: 33
Author(s): Wei Zhou, Bo Shen, Weiqiang Shen, Hao Chen, Yifeng Zheng, Jing-Jing Fei
Software Mentions: 2
Published: about 4 years ago

10.1590/S1679-45082014RW2955

[ARTIGO RETRATADO] Estimulação elétrica neuromuscular em pacientes graves em unidade de terapia intensiva: revisão sistemática
Cited by: 6
Author(s): Lucas Lima Ferreira, Luiz Carlos Marques Vanderlei, Vítor Engrácia Valenti
Software Mentions: 2
Published: over 10 years ago

10.3389/fcimb.2018.00375

Limited Correlation of Shotgun Metagenomics Following Host Depletion and Routine Diagnostics for Viruses and Bacteria in Low Concentrated Surrogate and Clinical Samples
Cited by: 34
Author(s): Corinne P. Oechslin, Nicole Lenz, Nicole Liechti, Sarah Ryter, Philipp Agyeman, Rémy Bruggmann, Stephen L. Leib, Christian Beuret
Software Mentions: 2
Published: about 6 years ago

10.1016/j.dib.2018.10.049

Data on Spectroscopic, Rheological characterization of neem oil and its isolated fractions
Cited by: 3
Author(s): Samir Bhargava, N. V. Satheesh Madhav
Software Mentions: 2
Published: about 6 years ago

10.3390/diagnostics10020074

Diagnosis of the Trigeminal Nerve Injury in a Patient with Pontine Hemorrhage
Cited by: 1
Author(s): Eun Bi Choi, Jeong Hyun Seo, Sung Ho Jang
Software Mentions: 2
Published: almost 5 years ago

10.1186/s12934-014-0151-y

Metabolomic basis of laboratory evolution of butanol tolerance in photosynthetic Synechocystis sp. PCC 6803
Cited by: 54
Author(s): Yaxing Wang, Mengliang Shi, Xiangfeng Niu, Xiaoqing Zhang, Linfeng Gao, Lei Chen, Jiangxin Wang, Weiwen Zhang
Software Mentions: 2
Published: about 10 years ago

10.3389/fnhum.2017.00275

Executive Mechanisms for Thinking about Negative Situations in Both Cooperative and Non-Cooperative Contexts
Cited by: 5
Author(s): Azalea Reyes-Aguilar, Juan Fernández-Ruíz, Erick H. Pasaye, Fernando A. Barrios
Software Mentions: 2
Published: over 7 years ago

10.1093/cercor/bhz104

Hippocampal Blood Flow Is Increased After 20 min of Moderate-Intensity Exercise
Cited by: 36
Author(s): Jessica J Steventon, Catherine Foster, Hannah Furby, Daniel Helme, Richard G. Wise, Kevin Murphy
Software Mentions: 2
Published: over 5 years ago

10.1186/1752-0509-5-26

Integration of lipidomics and transcriptomics data towards a systems biology model of sphingolipid metabolism
Cited by: 49
Author(s): Shakti Gupta, Mano Ram Maurya, Alfred H. Merrill, Christopher K. Glass, Shankar Subramaniam
Software Mentions: 2
Published: almost 14 years ago

10.3390/cancers13010001

Incorporating the Patient Voice in Sarcoma Research: How Can We Assess Health-Related Quality of Life in This Heterogeneous Group of Patients? A Study Protocol
Cited by: 11
Author(s): Dide den Hollander, Marco Fiore, Javier Martin‐Broto, Bernd Kasper, Antonio Casado Herráez, Danijela Kuliš, Ioanna Nixon, Samantha Sodergren, Martin Eichler, Winan J. van Houdt, Ingrid M.E. Desar, Isabelle Ray‐Coquard, Claire Piccinin, Hanna Koseła-Paterczyk, Aisha Miah, Leopold Hentschel, Susanne Schnittger, Roger Wilson, Winette T.A. van der Graaf, Olga Husson
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0131925

Next Generation Semiconductor Based Sequencing of the Donkey (Equus asinus) Genome Provided Comparative Sequence Data against the Horse Genome and a Few Millions of Single Nucleotide Polymorphisms
Cited by: 18
Author(s): Francesca Bertolini, Concetta Scimone, Calogero Geraci, Giuseppina Schiavo, Valerio Joe Utzeri, Vincenzo Chiofalo, Luca Fontanesi
Software Mentions: 2
Published: over 9 years ago

10.1186/1475-2875-12-290

Examining the impact of larval source management and insecticide-treated nets using a spatial agent-based model of Anopheles gambiae and a landscape generator tool
Cited by: 19
Author(s): Samsul Arifin, Gregory R. Madey, Frank H. Collins
Software Mentions: 2
Published: over 11 years ago

10.1371/journal.pone.0232072

Metabolic pathway alterations in microvascular endothelial cells in response to hypoxia
Cited by: 13
Author(s): Emily B. Cohen, Renee C. Geck, Alex Toker
Software Mentions: 2
Published: over 4 years ago

10.1155/2018/4580919

Sensitivity of Multiphase Pseudocontinuous Arterial Spin Labelling (MP pCASL) Magnetic Resonance Imaging for Measuring Brain and Tumour Blood Flow in Mice
Cited by: 8
Author(s): Jessica Buck, James R. Larkin, Manon A. Simard, Alexandre A. Khrapitchev, Michael A. Chappell, Nicola R. Sibson
Software Mentions: 2
Published: about 6 years ago

10.1186/s12902-019-0374-3

Concurrent presentation of thyroid storm and diabetic ketoacidosis: a systematic review of previously reported cases
Cited by: 11
Author(s): Devarajan Rathish, S.M.C.B. Karalliyadda
Software Mentions: 2
Published: over 5 years ago

10.1186/s12884-019-2518-x

Psychological and social consequences of non-invasive prenatal testing (NIPT): a scoping review
Cited by: 16
Author(s): Valérie Labonté, Dima Alsaid, Britta Lang, Joerg J Meerpohl
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0049240

BCL::Fold - De Novo Prediction of Complex and Large Protein Topologies by Assembly of Secondary Structure Elements
Cited by: 43
Author(s): Mert Karakaş, Nils Woetzel, René Staritzbichler, Nathan Alexander, Brian E. Weiner, Jens Meiler
Software Mentions: 2
Published: about 12 years ago

10.1371/journal.pone.0216235

The effect of trial repetition and problem size on the consistency of decision making
Cited by: 4
Author(s): Vladimír Bureš, Daniela Ponce, Pavel Čech, Karel Mls
Software Mentions: 2
Published: over 5 years ago

10.1192/bjo.2020.92

Self-administered EMDR therapy: potential solution for expanding the availability of psychotherapy for PTSD or unregulated recipe for disaster?
Cited by: 4
Author(s): Lauren Z Waterman, Max Cooper
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0142373

Dual Action of miR-125b As a Tumor Suppressor and OncomiR-22 Promotes Prostate Cancer Tumorigenesis
Cited by: 47
Author(s): William T. Budd, Sarah Seashols‐Williams, Gene C Clark, Danielle Weaver, Valerie Calvert, Emanuel F. Petricoin, Ema Dragoescu, Katherine O’Hanlon, Zendra E. Zehner
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0236384

Plasma neurofilament light protein correlates with diffusion tensor imaging metrics in frontotemporal dementia
Cited by: 22
Author(s): Nicola Spotorno, Olof Lindberg, Christer Nilsson, María Landqvist Waldö, Danielle van Westen, Karin Nilsson, Susanna Vestberg, Elisabet Englund, Henrik Zetterberg, Kaj Blennow, Jimmy Lätt, Markus Nilsson, Lars‐Olof Wahlund, Alexander Santillo
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0082411

The Combined Expression Patterns of Ikaros Isoforms Characterize Different Hematological Tumor Subtypes
Cited by: 7
Author(s): Carlos Orozco, Andrés Acevedo, Lázaro Cortina, Gina Cuéllar, Mónica Duarte, Liliana Martín, Néstor M. Mesa, Javier Muñoz, Carlos Andrés Portilla, Sandra Quijano, Guillermo Quintero, Martín González Rodríguez, Carlos Saavedra, Helena Groot, María Mercedes Torres, Valeriano López-Segura
Software Mentions: 2
Published: about 11 years ago

10.1186/1471-2148-8-144

Exploring historical trends using taxonomic name metadata
Cited by: 5
Author(s): Indra Neil Sarkar, Ryan Schenk, Cathy N. Norton
Software Mentions: 2
Published: almost 17 years ago

10.1371/journal.pone.0132508

Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigand
Cited by: 89
Author(s): Samuel DeLuca, Karen R. Khar, Jens Meiler
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0149483

Modular Synthetic Inverters from Zinc Finger Proteins and Small RNAs
Cited by: 7
Author(s): Justin Hsia, William J. Holtz, Michel M. Maharbiz, Murat Arcak, Jay D. Keasling
Software Mentions: 2
Published: almost 9 years ago

10.1186/s40478-020-01098-y

A roadmap of brain recovery in a mouse model of concussion: insights from neuroimaging
Cited by: 9
Author(s): Xuan Vinh To, Fatima A. Nasrallah
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0033319

A Computational Mechanism for Unified Gain and Timing Control in the Cerebellum
Cited by: 56
Author(s): Tadashi Yamazaki, Soichi Nagao
Software Mentions: 2
Published: almost 13 years ago

10.1371/journal.pone.0071431

New Non-Linear Color Look-Up Table for Visualization of Brain Fractional Anisotropy Based on Normative Measurements – Principals and First Clinical Use
Cited by: 2
Author(s): Jiří Keller, Aaron Rulseh, Arnošt Komárek, Iva Latnerová, Robert Rusina, Hana Brožová, Josef Vymazal
Software Mentions: 2
Published: over 11 years ago

10.1186/s12876-021-01707-7

Gene expression profiling of inflammatory cytokines in esophageal biopsies of different phenotypes of gastroesophageal reflux disease: a cross-sectional study
Cited by: 11
Author(s): M.R. Zavala-Solares, Gabriela Fonseca‐Camarillo, Miguel A. Valdovinos, Julio Granados, Guido Grajales-Figueroa, Luis Eduardo Zamora-Nava, Nancy E. Aguilar-Olivos, Luis R. Valdovinos-Garcia, Jesús K. Yamamoto-Furusho
Software Mentions: 2
Published: over 3 years ago

10.7759/cureus.16870

Patients’ Radiation Shielding in Interventional Radiology Settings: A Systematic Review
Cited by: 0
Author(s): M. T. El-Diasty, Ahmed A Olfat, Ahmad S Mufti, Ahmed R Alqurashi, Mohammed J Alghamdi
Software Mentions: 2
Published: over 3 years ago

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