An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pone.0071745

https://doi.org/10.1371/journal.pone.0071745

Impact of Library Preparation on Downstream Analysis and Interpretation of RNA-Seq Data: Comparison between Illumina PolyA and NuGEN Ovation Protocol

Cited by: 20
Author(s): Zhifu Sun, Yan W. Asmann, Asha Nair, Yuji Zhang, Liguo Wang, Krishna R. Kalari, Aditya Bhagwate, Tiffany R. Baker, Jennifer M. Carr, Jean Pierre A. Kocher, Edith A. Perez, E. Aubrey Thompson
Published: almost 12 years ago

Software Mentions 6

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
cran: CPAT
Change Point Analysis Tests
Papers that mentioned: 299
Very Likely Science (93)
pypi: CPAT
CPAT (Coding Potential Assessment Tool)
Papers that mentioned: 299
Very Likely Science (80)
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
Very Likely Science (65)
pypi: Library
Useful library package stuff.
Papers that mentioned: 489
Very Likely Science (65)
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017
Very Likely Science (90)