Data

Tools

Indexes

Applications

Experiments

Papers

pypi: CoolProp
Open-source thermodynamic and transport properties database
Papers that mentioned: 8
Very Likely Science (65)
cran: dagitty
Graphical Analysis of Structural Causal Models
Papers that mentioned: 8
Very Likely Science (99)
cran: exactci
Exact P-Values and Matching Confidence Intervals for Simple Discrete Parametric Cases
Papers that mentioned: 8
Very Likely Science (83)
pypi: grouper
Papers that mentioned: 8
Very Likely Science (65)
bioconductor: TFEA.ChIP
Analyze Transcription Factor Enrichment
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: Rdisop
Decomposition of Isotopic Patterns
Papers that mentioned: 8
Very Likely Science (100)
cran: lime
Local Interpretable Model-Agnostic Explanations
Papers that mentioned: 8
Very Likely Science (76)
bioconductor: COSNet
Cost Sensitive Network for node label prediction on graphs with highly unbalanced labelings
Papers that mentioned: 8
Very Likely Science (100)
pypi: scripta
Script asciinema movies
Papers that mentioned: 8
Very Likely Science (65)
bioconductor: slingshot
Tools for ordering single-cell sequencing
Papers that mentioned: 8
Very Likely Science (100)
cran: crrstep
Stepwise Covariate Selection for the Fine & Gray Competing Risks Regression Model
Papers that mentioned: 8
Very Likely Science (93)
cran: FER
Financial Engineering in R
Papers that mentioned: 8
Very Likely Science (75)
cran: pedigree
Pedigree Functions
Papers that mentioned: 8
Very Likely Science (75)
pypi: motmot
A sophisticated mesh class for analysing 3D surfaces.
Papers that mentioned: 8
Very Likely Science (65)
bioconductor: RCAS
RNA Centric Annotation System
Papers that mentioned: 8
Very Likely Science (90)
bioconductor: anota2seq
Generally applicable transcriptome-wide analysis of translational efficiency using anota2seq
Papers that mentioned: 8
Very Likely Science (100)
pypi: combat
pyComBat, a Python tool for batch effects correction in high-throughput molecular data using empirical Bayes methods
Papers that mentioned: 8
Very Likely Science (100)
cran: sms
Spatial Microsimulation
Papers that mentioned: 8
Very Likely Science (85)
cran: STPGA
Selection of Training Populations by Genetic Algorithm
Papers that mentioned: 8
Very Likely Science (85)
cran: FADA
Variable Selection for Supervised Classification in High Dimension
Papers that mentioned: 8
Very Likely Science (75)
cran: prevR
Estimating Regional Trends of a Prevalence from a DHS and Similar Surveys
Papers that mentioned: 8
Very Likely Science (85)
pypi: cubist
A Python package for fitting Quinlan's Cubist regression model.
Papers that mentioned: 8
Very Likely Science (90)
cran: PopED
Population (and Individual) Optimal Experimental Design
Papers that mentioned: 8
Very Likely Science (85)
bioconductor: SeqArray
Data Management of Large-Scale Whole-Genome Sequence Variant Calls
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: cn.mops
cn.mops - Mixture of Poissons for CNV detection in NGS data
Papers that mentioned: 8
Very Likely Science (90)
cran: ssh
Secure Shell (SSH) Client for R
Papers that mentioned: 8
Very Likely Science (83)
cran: ggjoy
Joyplots in 'ggplot2'
Papers that mentioned: 8
Very Likely Science (100)
cran: DoseFinding
Planning and Analyzing Dose Finding Experiments
Papers that mentioned: 8
Very Likely Science (85)
bioconductor: plyranges
A fluent interface for manipulating GenomicRanges
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: Trendy
Breakpoint analysis of time-course expression data
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: pqsfinder
Identification of potential quadruplex forming sequences
Papers that mentioned: 8
Very Likely Science (75)
pypi: mdtraj
MDTraj: A modern, open library for the analysis of molecular dynamics trajectories
Papers that mentioned: 8
Very Likely Science (90)
pypi: LogMeIn
Log in to networks
Papers that mentioned: 8
Very Likely Science (75)
pypi: OSR
Automated DJ/Announcer
Papers that mentioned: 8
Very Likely Science (65)
pypi: radiator
Electron propagation in the intergalactic medium
Papers that mentioned: 8
Very Likely Science (85)
pypi: picamera
A pure Python interface for the Raspberry Pi camera module.
Papers that mentioned: 8
Very Likely Science (80)
pypi: systematic
Sysadmin utility classes and scripts
Papers that mentioned: 8
Likely Science (40)
pypi: sms
SMS sending and receiving with enfora gsm modems
Papers that mentioned: 8
Very Likely Science (65)
pypi: util
Functions that should be in the Python standard library.
Papers that mentioned: 8
Very Likely Science (65)
pypi: tune
An abstraction layer for hyper parameter tuning
Papers that mentioned: 8
Likely Science (46)
pypi: pidgin
Conventions for writing code in the notebook.
Papers that mentioned: 8
Very Likely Science (65)
pypi: us
US state meta information and other fun stuff
Papers that mentioned: 8
Very Likely Science (80)
pypi: nmrglue
A module for working with NMR data in Python
Papers that mentioned: 8
Very Likely Science (80)
pypi: phydms
Phylogenetic analyses informed by deep mutational scanning data.
Papers that mentioned: 8
Very Likely Science (100)
pypi: Soar
An extensible Python framework for simulating and interacting with robots
Papers that mentioned: 8
Very Likely Science (100)
pypi: Tabby
Reads tabular data and turns it into python dicts
Papers that mentioned: 8
Very Likely Science (65)
pypi: pi
Simpler python package installation
Papers that mentioned: 8
Very Likely Science (65)
pypi: Ocelot
Static site generator designed for stories
Papers that mentioned: 8
Very Likely Science (65)
pypi: tim
TIM: Timed Iteration Monitor
Papers that mentioned: 8
Very Likely Science (65)
pypi: NucDiff
NucDiff locates and categorizes differences between two closely related nucleotide sequences.
Papers that mentioned: 8
Very Likely Science (100)
pypi: SyGMa
Systematic Generation of potential MetAbolites
Papers that mentioned: 8
Very Likely Science (100)
cran: gridBase
Integration of base and grid graphics
Papers that mentioned: 8
Very Likely Science (93)
pypi: cobra
COBRApy is a package for constraint-based modeling of metabolic networks.
Papers that mentioned: 8
Very Likely Science (100)
cran: ica
Independent Component Analysis
Papers that mentioned: 8
Very Likely Science (93)
cran: bios2mds
From Biological Sequences to Multidimensional Scaling
Papers that mentioned: 8
Likely Science (50)
pypi: ANNOgesic
ANNOgesic - A tool for bacterial/archaeal RNA-Seq based genome annotations
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: ASEB
Predict Acetylated Lysine Sites
Papers that mentioned: 8
Very Likely Science (98)
cran: mlr3
Machine Learning in R - Next Generation
Papers that mentioned: 8
Very Likely Science (100)
cran: BANOVA
Hierarchical Bayesian ANOVA Models
Papers that mentioned: 8
Very Likely Science (85)
bioconductor: FELLA
Interpretation and enrichment for metabolomics data
Papers that mentioned: 8
Very Likely Science (83)
pypi: astra
The Astra Exploit Framework
Papers that mentioned: 8
Very Likely Science (65)
bioconductor: GRENITS
Gene Regulatory Network Inference Using Time Series
Papers that mentioned: 8
Very Likely Science (100)
cran: apt
Asymmetric Price Transmission
Papers that mentioned: 8
Very Likely Science (83)
pypi: spider
Papers that mentioned: 8
Unlikely Science (0)
bioconductor: clipper
Gene Set Analysis Exploiting Pathway Topology
Papers that mentioned: 8
Very Likely Science (85)
cran: multicon
Multivariate Constructs
Papers that mentioned: 8
Very Likely Science (85)
cran: hdrcde
Highest Density Regions and Conditional Density Estimation
Papers that mentioned: 8
Very Likely Science (100)
cran: GWmodel
Geographically-Weighted Models
Papers that mentioned: 8
Very Likely Science (83)
bioconductor: Metab
Metab: An R Package for a High-Throughput Analysis of Metabolomics Data Generated by GC-MS.
Papers that mentioned: 8
Likely Science (43)
cran: imputeLCMD
A Collection of Methods for Left-Censored Missing Data Imputation
Papers that mentioned: 8
Very Likely Science (75)
cran: Factoshiny
Perform Factorial Analysis from 'FactoMineR' with a Shiny Application
Papers that mentioned: 8
Very Likely Science (85)
cran: survC1
C-Statistics for Risk Prediction Models with Censored Survival Data
Papers that mentioned: 8
Very Likely Science (93)
cran: BGGE
Bayesian Genomic Linear Models Applied to GE Genome Selection
Papers that mentioned: 8
Very Likely Science (85)
bioconductor: IMMAN
Interlog protein network reconstruction by Mapping and Mining ANalysis
Papers that mentioned: 8
Very Likely Science (100)
cran: nimble
MCMC, Particle Filtering, and Programmable Hierarchical Modeling
Papers that mentioned: 8
Very Likely Science (100)
cran: basicTrendline
Papers that mentioned: 8
Unlikely Science (0)
pypi: ace
Non-parametric multivariate regressions by Alternating Conditional Expectations
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: IHW
Independent Hypothesis Weighting
Papers that mentioned: 8
Very Likely Science (75)
bioconductor: NormalyzerDE
Evaluation of normalization methods and calculation of differential expression analysis statistics
Papers that mentioned: 8
Very Likely Science (100)
cran: expert
Papers that mentioned: 8
Unlikely Science (0)
cran: crqa
Unidimensional and Multidimensional Methods for Recurrence Quantification Analysis
Papers that mentioned: 8
Very Likely Science (85)
bioconductor: Harshlight
A "corrective make-up" program for microarray chips
Papers that mentioned: 8
Very Likely Science (100)
cran: huge
High-Dimensional Undirected Graph Estimation
Papers that mentioned: 8
Very Likely Science (75)
cran: cli
Helpers for Developing Command Line Interfaces
Papers that mentioned: 8
Very Likely Science (75)
pypi: randomizer
Liberty for generate random data.
Papers that mentioned: 8
Very Likely Science (65)
cran: gtsummary
Presentation-Ready Data Summary and Analytic Result Tables
Papers that mentioned: 8
Very Likely Science (100)
pypi: FCT
Basic Library for Viewing Radio Images
Papers that mentioned: 8
Very Likely Science (100)
bioconductor: Maaslin2
"Multivariable Association Discovery in Population-scale Meta-omics Studies"
Papers that mentioned: 8
Very Likely Science (90)
bioconductor: CSSP
ChIP-Seq Statistical Power
Papers that mentioned: 8
Very Likely Science (100)
cran: c3net
Inferring Large-Scale Gene Networks with C3NET
Papers that mentioned: 8
Very Likely Science (85)
cran: iRF
Papers that mentioned: 8
Unlikely Science (0)
pypi: XYalign
Command line tools and python library to infer ploidy, correct for sex chromosome complement, and work with NGS data
Papers that mentioned: 8
Very Likely Science (85)
cran: scatterpie
Scatter Pie Plot
Papers that mentioned: 8
Likely Science (50)
pypi: Juice
A full stack Flask based framework that put structure in the file system. Features: Caching, Mailing, Storage, CSRF, recaptcha and more
Papers that mentioned: 8
Very Likely Science (65)
cran: ggVennDiagram
A 'ggplot2' Implement of Venn Diagram
Papers that mentioned: 8
Very Likely Science (85)
pypi: hist
Hist classes and utilities
Papers that mentioned: 8
Very Likely Science (95)
pypi: searcher
Papers that mentioned: 8
Very Likely Science (65)
cran: FlexParamCurve
Tools to Fit Flexible Parametric Curves
Papers that mentioned: 8
Very Likely Science (83)
pypi: insilico
A Python package to process & model ChEMBL data.
Papers that mentioned: 8
Very Likely Science (80)
cran: DNAtools
Tools for Analysing Forensic Genetic DNA Data
Papers that mentioned: 8
Very Likely Science (100)