Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: insilico

https://packages.ecosyste.ms/registries/pypi.org/packages/insilico

A Python package to process & model ChEMBL data.
2 versions
Latest release: almost 3 years ago
5 downloads last month

Papers Mentioning insilico 8

Neurogenomic divergence during speciation by reinforcement of mating behaviors in chorus frogs (Pseudacris)
Cited by: 4
Author(s): Oscar E. Ospina, Alan R. Lemmon, Mysia Dye, Christopher Zdyrski, Sean Holland, Daniel Stribling, Michelle L Kortyna, Emily Moriarty Lemmon
Software Mentions: 9
Published: almost 3 years ago

10.1186/s12864-018-4763-1

A transposable element annotation pipeline and expression analysis reveal potentially active elements in the microalga Tisochrysis lutea
Cited by: 36
Author(s): Jérémy Berthelier, Nathalie Casse, Nicolas Daccord, Véronique Jamilloux, Bruno Saint‐Jean, Grégory Carrier
Software Mentions: 5
Published: over 6 years ago

10.1186/s12864-019-5709-y

Improved annotation of the domestic pig genome through integration of Iso-Seq and RNA-seq data
Cited by: 53
Author(s): Hamid Beiki, Haibo Li, Jinrong Huang, Nancy Manchanda, D. Nonneman, Timothy P. L. Smith, James M. Reecy, Christopher K. Tuggle
Software Mentions: 4
Published: over 5 years ago

10.1186/s12864-021-07932-4

Up-regulation of apoptotic- and cell survival-related gene pathways following exposures of western corn rootworm to B. thuringiensis crystalline pesticidal proteins in transgenic maize roots
Cited by: 3
Author(s): Brad S. Coates, Emeline Deleury, Aaron J. Gassmann, Bruce E. Hibbard, Lance J. Meinke, Nicholas J. Miller, Jennifer L. Petzold-Maxwell, B. Wade French, Thomas W. Sappington, Blair D. Siegfried, Thomas Guillemaud
Software Mentions: 4
Published: about 3 years ago

10.1186/s12864-017-3757-8

A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing
Cited by: 149
Author(s): Nam V. Hoang, Agnelo Furtado, Patrick J. Mason, Annelie Marquardt, Lakshmi Kasirajan, Prathima P. Thirugnanasambandam, Frederik C. Botha, Robert J. Henry
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0174997

Differential transcriptome analysis supports Rhodnius montenegrensis and Rhodnius robustus (Hemiptera, Reduviidae, Triatominae) as distinct species
Cited by: 14
Author(s): Danila Blanco de Carvalho, Carlos Congrains, Samira Chahad‐Ehlers, Heloisa Pinotti, Reinaldo Alves de Brito, João Aristeu da Rosa
Software Mentions: 1
Published: over 7 years ago

10.3389/fgene.2018.00120

Litopenaeus vannamei Transcriptome Profile of Populations Evaluated for Growth Performance and Exposed to White Spot Syndrome Virus (WSSV)
Cited by: 18
Author(s): Camilla A. Santos, Sónia C. S. Andrade, Ana Karina Teixeira, Flávio Farias, Karin Kurkjian, Ana Carolina Guerrelhas, J. L. Rocha, Pedro M. Galetti, Patrícia D. Freitas
Software Mentions: 1
Published: over 6 years ago

10.1093/gigascience/giaa051

An improved pig reference genome sequence to enable pig genetics and genomics research
Cited by: 159
Author(s): Amanda Warr, Nabeel A. Affara, Bronwen Aken, Hamid Beiki, Derek M. Bickhart, Konstantinos Billis, William Chow, Lél Eöry, Heather Finlayson, Paul Flicek, Carlos García Girón, Darren K. Griffin, Richard J. Hall, Greg Hannum, Thibaut Hourlier, Kerstin Howe, David Hume, Osagie Izuogu, Kristi Kim, Sergey Koren, Haibou Liu, Nancy Manchanda, Fergal J. Martin, Dan Nonneman, Rebecca E O'Connor, Adam M. Phillippy, Gary A. Rohrer, Benjamin D. Rosen, Laurie A. Rund, Carole A. Sargent, Lawrence B. Schook, Steven G. Schroeder, Ariel Schwartz, Ben M Skinner, Richard Talbot, Elizabeth Tseng, Christopher K. Tuggle, Mick Watson, Timothy P. L. Smith, Alan Archibald
Software Mentions: 1
Published: over 4 years ago