Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: GRENITS

https://packages.ecosyste.ms/registries/bioconductor.org/packages/GRENITS

Gene Regulatory Network Inference Using Time Series
1 version
Latest release: 10 months ago
22,405 downloads total

Papers Mentioning GRENITS 8

10.1038/s41598-018-34964-w

Inducing controlled cell cycle arrest and re-entry during asexual proliferation of Plasmodium falciparum malaria parasites
Cited by: 29
Author(s): Riëtte van Biljon, Jandeli Niemand, Roelof van Wyk, Katherine Clark, Bianca K. Verlinden, Clarissa Abrie, Hilde von Grüning, Werner Smidt, Annél Smit, Janette Reader, Heather J. Painter, Manuel Llinás, Christian Doerig, Lyn‐Marié Birkholtz
Software Mentions: 4
Published: over 5 years ago

10.12688/f1000research.10701.2

Computational design of molecular motors as nanocircuits in Leishmaniasis
Cited by: 0
Author(s): Dipali Kosey, Shailza Singh
Software Mentions: 3
Published: almost 7 years ago

10.1038/s41598-018-21840-w

Transcription Factor Target Gene Network governs the Logical Abstraction Analysis of the Synthetic Circuit in Leishmaniasis
Cited by: 4
Author(s): Milsee Mol, Dipali Kosey, Ramanamurthy Boppana, Shailza Singh
Software Mentions: 3
Published: over 6 years ago

10.7150/thno.38507

MicroRNA-204-5p is a tumor suppressor and potential therapeutic target in head and neck squamous cell carcinoma
Cited by: 36
Author(s): Zerui Zhuang, Pei Yu, Ning Xie, Yue Wu, Haichao Liu, Ming Zhang, Yifan Tao, Weiwang Wang, Hanqi Yin, Bin Zou, Jinsong Hou, Xiqiang Liu, Jiong Li, Haidong Huang, Cheng Wang
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pcbi.1007435

Differential regulatory network-based quantification and prioritization of key genes underlying cancer drug resistance based on time-course RNA-seq data
Cited by: 18
Author(s): Jiajun Zhang, Wenbo Zhu, Qianliang Wang, Jiayu Gu, Lei Huang, Xiaoqiang Sun
Software Mentions: 2
Published: over 4 years ago

10.1186/s12864-019-6322-9

Hierarchical transcriptional control regulates Plasmodium falciparum sexual differentiation
Cited by: 57
Author(s): Riëtte van Biljon, Roelof van Wyk, Heather J. Painter, Lindsey M. Orchard, Janette Reader, Jandeli Niemand, Manuel Llinás, Lyn‐Marié Birkholtz
Software Mentions: 2
Published: over 4 years ago

10.1093/bioinformatics/btu388

Correcting for link loss in causal network inference caused by regulator interference
Cited by: 2
Author(s): Ying Wang, Christopher A. Penfold, David A. Hodgson, Miriam L. Gifford, Nigel John Burroughs
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pcbi.1004607

Inferring the Forces Controlling Metaphase Kinetochore Oscillations by Reverse Engineering System Dynamics
Cited by: 30
Author(s): Jonathan W. Armond, Edward Harry, Andrew D. McAinsh, Nigel John Burroughs
Software Mentions: 1
Published: over 8 years ago