Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: SeqArray

https://packages.ecosyste.ms/registries/bioconductor.org/packages/SeqArray

Data Management of Large-Scale Whole-Genome Sequence Variant Calls
1 version
Latest release: about 1 year ago
11 dependent packages
75,741 downloads total

Papers Mentioning SeqArray 8

10.12688/f1000research.15949.2

The Mega2R package: R tools for accessing and processing genetic data in common formats
Cited by: 0
Author(s): R. Baron, Justin R. Stickel, Daniel E. Weeks
Software Mentions: 12
Published: over 5 years ago

10.1186/s12859-021-04170-z

Estimating colocalization probability from limited summary statistics
Cited by: 3
Author(s): Emily King, Fengjiao Dunbar, J. Wade Davis, Jacob F. Degner
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0113163

The Bull Sperm MicroRNAome and the Effect of Fescue Toxicosis on Sperm MicroRNA Expression
Cited by: 28
Author(s): Heather M. Stowe, Samantha M. Calcatera, M.A. Dimmick, John Andrae, S. K. Duckett, Scott L. Pratt
Software Mentions: 2
Published: almost 10 years ago

10.1111/eva.12624

Genetic diversity and relationship between domesticated rye and its wild relatives as revealed through genotyping‐by‐sequencing
Cited by: 47
Author(s): Mona Schreiber, Axel Himmelbach, Andreas Börner, Martin Mascher
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0232942

Vertical lossless genomic data compression tools for assembled genomes: A systematic literature review
Cited by: 2
Author(s): Kelvin V. Kredens, Juliano V. Martins, Osmar Betazzi Dordal, Mauri Ferrandin, Roberto Hirochi Herai, Edson Emílio Scalabrin, Bráulio C. Ávila
Software Mentions: 2
Published: over 4 years ago

10.1186/s13059-021-02442-8

VariantStore: an index for large-scale genomic variant search
Cited by: 3
Author(s): Prashant Pandey, Yinjie Gao, Carl Kingsford
Software Mentions: 2
Published: over 3 years ago

10.1093/gbe/evx256

High-Resolution Single-Cell Sequencing of Malaria Parasites
Cited by: 36
Author(s): Simon G. Trevino, Standwell C. Nkhoma, Shalini Nair, Benjamin J. Daniel, Karla Moncada, Stanley Khoswe, Rachel Banda, François Nosten, Ian H. Cheeseman
Software Mentions: 1
Published: almost 7 years ago

10.1186/s12859-019-2698-4

JOA: Joint Overlap Analysis of multiple genomic interval sets
Cited by: 2
Author(s): Burçak Otlu, Tolga Can
Software Mentions: 1
Published: over 5 years ago