cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.3389/fgene.2019.00279

Integrative Differential Expression Analysis for Multiple EXperiments (IDEAMEX): A Web Server Tool for Integrated RNA-Seq Data Analysis
Cited by: 46
Author(s): Verónica Jiménez-Jacinto, Alejandro Sánchez-Flores, Leticia Vega‐Alvarado
Software Mentions: 10
Published: about 7 years ago

10.1186/s12918-015-0169-8

Increased robustness of early embryogenesis through collective decision-making by key transcription factors
Cited by: 8
Author(s): Ali Sharifi-Zarchi, Mehdi Totonchi, Keynoush Khaloughi, Razieh Karamzadeh, Marcos J. Araúzo-Bravo, Hossein Baharvand, Ruzbeh Tusserkani, Hamid Pezeshk, Hamidreza Chitsaz, Mehdi Sadeghi
Software Mentions: 10
Published: about 11 years ago

10.7717/peerj.11222

The postcranial skeleton of Cerrejonisuchus improcerus (Crocodyliformes: Dyrosauridae) and the unusual anatomy of dyrosaurids
Cited by: 1
Author(s): Isaure Scavezzoni, Valentin Fischer
Software Mentions: 10
Published: about 5 years ago

10.7717/peerj.8027

Limited initial impacts of biomass harvesting on composition of wood-inhabiting fungi within residual stumps
Cited by: 0
Author(s): Cédric Boué, Tonia DeBellis, Lisa Venier, Timothy T. Work, Steven W. Kembel
Software Mentions: 10
Published: over 6 years ago

10.7554/eLife.62210

Proteomic analysis of young and old mouse hematopoietic stem cells and their progenitors reveals post-transcriptional regulation in stem cells
Cited by: 18
Author(s): Balyn W. Zaro, Joseph J. Noh, Victoria L. Mascetti, János Demeter, Benson M. George, Monika Żukowska, Gunsagar S. Gulati, Rahul Sinha, Ryan A. Flynn, Allison Banuelos, Allison Zhang, Adam C. Wilkinson, Peter K. Jackson, Irving L. Weissman
Software Mentions: 10
Published: over 5 years ago

10.7717/peerj.10421

Loss of HOXB3 correlates with the development of hormone receptor negative breast cancer
Cited by: 6
Author(s): Lizhe Zhu, Shibo Yu, Siyuan Jiang, Ge Gao, Yan Yu, Yong Jin Zhou, Ligang Niu, Jing He, Yu Ren, Bin Wang
Software Mentions: 10
Published: over 5 years ago

10.3389/fmolb.2021.692530

Ferroptosis-Related Gene Signature and Patterns of Immune Infiltration Predict the Overall Survival in Patients With Lung Adenocarcinoma
Cited by: 5
Author(s): Yuxuan Wang, Weikang Chen, Minqi Zhu, Lei Xian
Software Mentions: 10
Published: almost 5 years ago

10.7717/peerj.10264

MutRank: an R shiny web-application for exploratory targeted mutual rank-based coexpression analyses integrated with user-provided supporting information
Cited by: 6
Author(s): Elly Poretsky, Alisa Huffaker
Software Mentions: 10
Published: over 5 years ago

10.1038/s41598-017-05505-8

Machine Learning Algorithms for Risk Prediction of Severe Hand-Foot-Mouth Disease in Children
Cited by: 15
Author(s): Bin Zhang, Xiang Wan, Fu Ouyang, Yu Dong, Dehui Luo, Jing Liu, Long Liang, Wen Bo Chen, Xiao Luo, Xiao Mo, Lu Zhang, Wen Hui Huang, Shu Fang Pei, Bao Liang Guo, Chun Liang, Long Zhou, Shui Xing Zhang
Software Mentions: 10
Published: almost 9 years ago

10.3389/fmicb.2018.01598

Microbiome Composition in Both Wild-Type and Disease Model Mice Is Heavily Influenced by Mouse Facility
Cited by: 60
Author(s): Kristopher D. Parker, Shannon E. Albeke, Jason P. Gigley, Allan M. Goldstein, Naomi Ward
Software Mentions: 10
Published: almost 8 years ago

10.1371/journal.pntd.0009540

Sexual selection theory meets disease vector control: Testing harmonic convergence as a “good genes” signal in Aedes aegypti mosquitoes
Cited by: 6
Author(s): Garrett P. League, Laura C. Harrington, Sylvie A. Pitcher, Julie K. Geyer, Lindsay L. Baxter, Julian Montijo, John G. Rowland, Lynn M. Johnson, Courtney C. Murdock, Lauren J. Cator
Software Mentions: 10
Published: almost 5 years ago

10.1038/s41598-021-94329-8

Combined detection of peripheral blood VEGF and inflammation biomarkers to evaluate the clinical response and prognostic prediction of non-operative ESCC
Cited by: 4
Author(s): Yuanyuan Ma, Xinyu Su, Xin Li, Xiaohui Zhi, Kan Jiang, Jianhong Xia, Hongliang Li, Yan Chen, Lixin Zhou
Software Mentions: 10
Published: almost 5 years ago

10.3390/cancers13133175

Transcript-Level Dysregulation of BCL2 Family Genes in Acute Myeloblastic Leukemia
Cited by: 7
Author(s): Luiza Handschuh, Paweł Wojciechowski, Maciej Kaźmierczak, K Lewandowski
Software Mentions: 10
Published: almost 5 years ago

10.1186/s12864-021-07388-6

Phenotype and multi-omics comparison of Staphylococcus and Streptococcus uncovers pathogenic traits and predicts zoonotic potential
Cited by: 3
Author(s): Niels A. Zondervan, Vítor A. P. Martins dos Santos, María Suárez-Diez, Edoardo Saccenti
Software Mentions: 10
Published: over 5 years ago

10.1186/s12916-020-01595-w

Serum metabolite profiles are associated with the presence of advanced liver fibrosis in Chinese patients with chronic hepatitis B viral infection
Cited by: 30
Author(s): Guoxiang Xie, Xiaoning Wang, Runmin Wei, Jingye Wang, Aihua Zhao, Tianlu Chen, Yixing Wang, Hua Zhang, Zhun Xiao, Xin-Zhu Liu, Youping Deng, Linda L. Wong, Cynthia Rajani, Sandi A. Kwee, Hua Bian, Xin Gao, Ping Liu, Jia Wang
Software Mentions: 10
Published: almost 6 years ago

10.1371/journal.pone.0209331

Rethomics: An R framework to analyse high-throughput behavioural data
Cited by: 66
Author(s): Quentin Geissmann, Luis García Rodríguez, Esteban J. Beckwith, Giorgio F. Gilestro
Software Mentions: 10
Published: over 7 years ago

10.1007/s11250-021-02620-7

Risk factors associated with Ctenocephalides felis flea infestation of peri-urban goats: a neglected parasite in an under-appreciated host
Cited by: 4
Author(s): Julia Rose Dahm, Jordana Burdon Bailey, Robert F. Kelly, Patrick Chikungwa, Julius L.C. Chulu, Lívio Martins Costa, Emily June Freeman, Dagmar Mayer, Stella Mazeri, Neil Sargison
Software Mentions: 10
Published: over 5 years ago

10.1097/MD.0000000000026068

MiRNA-based model for predicting the TMB level in colon adenocarcinoma based on a LASSO logistic regression method
Cited by: 1
Author(s): Zhengtian Li, Lingling Jiang, Rong Zhao, Jun Huang, Weibo Yang, Zhenpei Wen, Bo Zhang, Gang Du
Software Mentions: 10
Published: about 5 years ago

10.3389/fmicb.2020.01190

Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic Potential of Pseudomonas Species in Milk
Cited by: 14
Author(s): Christopher Maier, Christopher Huptas, Mario von Neubeck, Stephen W. Scherer, Mareike Wenning, Genia Lücking
Software Mentions: 10
Published: almost 6 years ago

10.7717/peerj.11903

Taxonomic and functional diversity of benthic macrofauna associated with rhodolith beds in SE Brazil
Cited by: 10
Author(s): Patricia Sarcinelli Stelzer, Ana Carolina de Azevedo Mazzuco, L.E. de O. Gomes, João Luiz Martins, Sérgio A. Netto, Ângelo F. Bernardino
Software Mentions: 10
Published: almost 5 years ago

10.1038/s41598-017-09303-0

The impact of immigration on microbial community composition in full-scale anaerobic digesters
Cited by: 111
Author(s): Rasmus Hansen Kirkegaard, Simon Jon McIlroy, Jannie Munk Kristensen, Marta Nierychlo, Søren Michael Karst, Morten Simonsen Dueholm, Mads Albertsen, Per Halkjær Nielsen
Software Mentions: 10
Published: almost 9 years ago

10.1093/aje/kwaa127

Conditional Cash Transfer Program and Leprosy Incidence: Analysis of 12.9 Million Families From the 100 Million Brazilian Cohort
Cited by: 15
Author(s): Júlia Moreira Pescarini, Elizabeth Williamson, Maria Yury Ichihara, Rosemeire Leovigildo Fiaccone, Laura Forastiere, Anna Ramond, Joilda Silva Nery, Maria Lúcia Fernandes Penna, Agostino Strina, Sandra Reis, Liam Smeeth, Laura C. Rodrigues, Elizabeth B Brickley, Gerson Oliveira Penna, Marcos Barreto
Software Mentions: 10
Published: almost 6 years ago

10.1371/journal.pone.0114749

FindFoci: A Focus Detection Algorithm with Automated Parameter Training That Closely Matches Human Assignments, Reduces Human Inconsistencies and Increases Speed of Analysis
Cited by: 88
Author(s): Alex Herbert, Antony Carr, Eva R. Hoffmann
Software Mentions: 10
Published: over 11 years ago

10.1038/s41598-021-89904-y

Feasibility of predicting allele specific expression from DNA sequencing using machine learning
Cited by: 5
Author(s): Zhenhua Zhang, Freerk van Dijk, Nigel Klein, Mariëlle van Gijn, Lude Franke, Richard J. Sinke, Morris A. Swertz, K. Joeri van der Velde
Software Mentions: 10
Published: about 5 years ago

10.3389/fmicb.2021.679671

Measurement of Volatile Compounds for Real-Time Analysis of Soil Microbial Metabolic Response to Simulated Snowmelt
Cited by: 4
Author(s): Junhyeong Kim, A. H. Goldstein, Romy Chakraborty, Kolby Jardine, Robert J. Weber, P. Sørensen, Wang Shi, Boris Faybishenko, Pawel K. Misztal, Eoin L. Brodie
Software Mentions: 10
Published: almost 5 years ago

10.3389/fmicb.2021.642543

Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites
Cited by: 6
Author(s): Jorge Doña, Stephany Virrueta Herrera, Tommi Nyman, Mervi Kunnasranta, Kevin P. Johnson
Software Mentions: 10
Published: about 5 years ago

10.3389/fmicb.2019.02476

Characterization of the Mycobiome of the Seagrass, Zostera marina, Reveals Putative Associations With Marine Chytrids
Cited by: 29
Author(s): Cassandra L. Ettinger, Jonathan A. Eisen
Software Mentions: 10
Published: over 6 years ago

10.1186/s12935-021-01965-1

Elevated expression of LPCAT1 predicts a poor prognosis and is correlated with the tumour microenvironment in endometrial cancer
Cited by: 9
Author(s): Tianyi Zhao, Min Han, Xiaohong Ma, Lina Wei, Yixin Hou, Rui Sun, Jie Jiang
Software Mentions: 10
Published: about 5 years ago

10.3389/fmicb.2018.01095

CowPI: A Rumen Microbiome Focussed Version of the PICRUSt Functional Inference Software
Cited by: 99
Author(s): Toby Wilkinson, Sharon Huws, Joan E. Edwards, Alison H. Kingston‐Smith, Karen Siu-Ting, Martin Hughes, Francesco Rubino, Maximillian Friedersdorff, Christopher J. Creevey
Software Mentions: 10
Published: about 8 years ago

10.3389/fmicb.2021.706214

Dietary Exposure of Pacific Oyster (Crassostrea gigas) Larvae to Compromised Microalgae Results in Impaired Fitness and Microbiome Shift
Cited by: 5
Author(s): Julien Vignier, Olivier Laroche, Anne Rolton, Pandora Wadsworth, K. Kumanan, Branwen Trochel, Xavier Pochon, Nathan King
Software Mentions: 10
Published: almost 5 years ago

10.1007/s00401-020-02224-9

Altered DNA methylation profiles in blood from patients with sporadic Creutzfeldt–Jakob disease
Cited by: 14
Author(s): Luke C. Dabin, Fernando Guntoro, Tracy Campbell, Tony Bélicard, Adam R. Smith, Rebecca G. Smith, Rachel Raybould, Jonathan M. Schott, Katie Lunnon, Peter Sarkies, John Collinge, Simon Mead, Emmanuelle Viré
Software Mentions: 10
Published: over 5 years ago

10.1038/s41598-021-88702-w

Shorter headed dogs, visually cooperative breeds, younger and playful dogs form eye contact faster with an unfamiliar human
Cited by: 23
Author(s): Zsófia Bognár, Dóra Szabó, Alexandra Deés, Enikő Kubinyi
Software Mentions: 10
Published: about 5 years ago

10.3389/fpsyg.2020.555576

Trail Pheromone Does Not Modulate Subjective Reward Evaluation in Lasius niger Ants
Cited by: 3
Author(s): Felix B. Oberhauser, Stephanie Wendt, Tomer J. Czaczkes
Software Mentions: 10
Published: over 5 years ago

10.3389/pore.2021.594649

Bcl-2 Associated Athanogene 2 (BAG2) is Associated With Progression and Prognosis of Hepatocellular Carcinoma: A Bioinformatics-Based Analysis
Cited by: 7
Author(s): Xi Zhang, Junjun Zhang, Yang Liu, Jie Li, Juan Tan, Zewen Song
Software Mentions: 10
Published: about 5 years ago

10.3389/fimmu.2021.602539

Single-Cell Transcriptomic Analyses Define Distinct Peripheral B Cell Subsets and Discrete Development Pathways
Cited by: 60
Author(s): Alexander Stewart, Joseph C.F. Ng, Gillian A. Wallis, Vasiliki Tsioligka, Franca Fraternali, Deborah K. Dunn‐Walters
Software Mentions: 10
Published: about 5 years ago

10.1016/j.celrep.2020.107885

CD4+ T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features
Cited by: 9
Author(s): Alexander Greenshields‐Watson, Meriem Attaf, Bruce J. MacLachlan, Thomas Whalley, Cristina Rius, Aaron Wall, Alun G. Lloyd, Hywel Hughes, Kathryn E. Strange, Georgina H Mason, Andrea J. A. Schauenburg, Sarah Hulin-Curtis, James Geary, Yuan Chen, Sarah N. Lauder, Kathryn Smart, Dhanasekaran Vijaykrishna, Miguel L. Grau, Mikhail Shugay, Robert Andrews, Garry Dolton, P.J. Rizkallah, Awen Gallimore, Andrew K. Sewell, Andrew Godkin, David K. Cole
Software Mentions: 10
Published: almost 6 years ago

10.1016/j.celrep.2019.10.024

Single-Cell Transcriptomics Uncovers Zonation of Function in the Mesenchyme during Liver Fibrosis
Cited by: 227
Author(s): Ross Dobie, John Wilson-Kanamori, Beth E. P. Henderson, J. F. Smith, Kylie P. Matchett, Jordan Raymond Portman, Karolina Wallenborg, Simone Picelli, Анна Загорска, Swetha Pendem, Thomas E. Hudson, Max C. Wu, Grant R. Budas, David G. Breckenridge, Ewen M Harrison, Damian J. Mole, Stephen J. Wigmore, Prakash Ramachandran, Chris P. Ponting, Sarah A. Teichmann, John C. Marioni, Neil C. Henderson
Software Mentions: 10
Published: over 6 years ago

10.1093/molbev/msu269

Evaluating the Use of ABBA–BABA Statistics to Locate Introgressed Loci
Cited by: 488
Author(s): Simon H. Martin, John W. Davey, Chris D. Jiggins
Software Mentions: 10
Published: over 11 years ago

10.1038/s41598-020-62453-6

Patterns of Rift Valley fever virus seropositivity in domestic ruminants in central South Africa four years after a large outbreak
Cited by: 19
Author(s): Yusuf B. Ngoshe, Alida Avenant, Melinda K. Rostal, William B. Karesh, Janusz T. Pawęska, Whitney Bagge, Petrus Jansen van Vuren, Alan C. Kemp, Claudia Cordel, Veerle Msimang, Peter N. Thompson
Software Mentions: 10
Published: about 6 years ago

10.3390/cells9030779

Transcriptomic Insights into Mechanisms of Early Seed Maturation in the Garden Pea (Pisum sativum L.)
Cited by: 12
Author(s): Yury V. Malovichko, O. Y. Shtark, Ekaterina N. Vasileva, Anton A. Nizhnikov, Kirill S. Antonets
Software Mentions: 10
Published: about 6 years ago

10.1093/gigascience/giaa060

SnpHub: an easy-to-set-up web server framework for exploring large-scale genomic variation data in the post-genomic era with applications in wheat
Cited by: 35
Author(s): Wenxi Wang, Zihao Wang, Xintong Li, Zhongfu Ni, Zhaorong Hu, Mingming Xin, Huiru Peng, Yingyin Yao, Qixin Sun, Weilong Guo
Software Mentions: 10
Published: about 6 years ago

10.1007/s11357-021-00424-z

Impact of COVID-19 on ischemic stroke care in Hungary
Cited by: 5
Author(s): Péter Pál Böjti, G. Szilágyi, Balázs Dobi, Rita Stang, I Szikora, Balázs Kis, Ákos Kornfeld, Csaba Óváry, Lóránd Eröss, Péter Banczerowski, Wojciech Kuczyński, Dániel Bereczki
Software Mentions: 10
Published: almost 5 years ago

10.3390/ijerph18168271

Cluster Analysis of Urban Acoustic Environments on Barcelona Sensor Network Data
Cited by: 10
Author(s): Antonio Pita, Francisco Javier Iglesias Rodríguez, Juan M. Navarro
Software Mentions: 10
Published: almost 5 years ago

10.1002/ece3.7907

Inventory of the benthic eukaryotic diversity in the oldest European lake
Cited by: 2
Author(s): Benjamin Wilden, Walter Traunspurger, Stefan Geisen
Software Mentions: 10
Published: almost 5 years ago

10.1093/gigascience/giz064

TuBA: Tunable biclustering algorithm reveals clinically relevant tumor transcriptional profiles in breast cancer
Cited by: 6
Author(s): Amartya Singh, Gyan Bhanot, Hossein Khiabanian
Software Mentions: 10
Published: about 7 years ago

10.1002/brb3.2174

Co‐activation pattern alterations in autism spectrum disorder–A volume‐wise hierarchical clustering fMRI study
Cited by: 2
Author(s): Jyri‐Johan Paakki, Jukka S. Rahko, Aija Kotila, Marja‐Leena Mattila, Helena Miettunen, Tuula Hurtig, Katja Jussila, Sanna Kuusikko‐Gauffin, Irma Moilanen, Osmo Tervonen, Vesa Kiviniemi
Software Mentions: 10
Published: about 5 years ago

10.1186/s13073-021-00919-6

Circulating bacterial signature is linked to metabolic disease and shifts with metabolic alleviation after bariatric surgery
Cited by: 14
Author(s): Rima Chakaroun, Lucas Massier, Anna Heintz‐Buschart, Nedal Said, Jörg Fallmann, Alyce Crane, Tatjana Schütz, Arne Dietrich, Matthias Blüher, Michael Stümvoll, Niculina Musat, Peter Kovacs
Software Mentions: 10
Published: almost 5 years ago

10.1155/2021/5567392

Construction and Validation of a Novel Prognostic Signature for Intestinal Type of Gastric Cancer
Cited by: 3
Author(s): Fan Zhang, Ewetse Paul Maswikiti, Yucai Wei, Wenzhang Wu, Yumin Li
Software Mentions: 10
Published: almost 5 years ago

10.3389/fonc.2021.704038

Fatty Acid Metabolism-Related lncRNAs Are Potential Biomarkers for Predicting the Overall Survival of Patients With Colorectal Cancer
Cited by: 13
Author(s): Yue Peng, Chang Xu, Jun Wen, Yuanchuan Zhang, Meng Wang, Xiaoxiao Liu, Kang Zhao, Zheng Wang, Yanjun Liu, Tongtong Zhang
Software Mentions: 10
Published: almost 5 years ago

10.1186/s13071-020-04319-4

Retrospective analysis of feline intestinal parasites: trends in testing positivity by age, USA geographical region and reason for veterinary visit
Cited by: 7
Author(s): Sarah Sweet, Donald Szlosek, Donald J. McCrann, Michael J. Coyne, David Kincaid, Evan Hegarty
Software Mentions: 10
Published: over 5 years ago

10.1038/s41598-021-84545-7

Quantitative molecular detection of larval Atlantic herring (Clupea harengus) in stomach contents of Atlantic mackerel (Scomber scombrus) marks regions of predation pressure
Cited by: 11
Author(s): Bridie J. M. Allan, Jessica L. Ray, Maik Tiedemann, Valeriya Komyakova, Frode Vikebø, Katrine Sandnes Skaar, Martina Stiasny, Arild Folkvord, Richard Nash, Erling Kåre Stenevik, Olav Sigurd Kjesbu
Software Mentions: 10
Published: over 5 years ago

10.3390/ijms22083975

Mapping Astrocyte Transcriptional Signatures in Response to Neuroactive Compounds
Cited by: 11
Author(s): Debosmita Sardar, Brittney Lozzi, Junsung Woo, Teng-Wei Huang, Caroline Cvetkovic, Chad J. Creighton, Robert Krencik, Benjamin Deneen
Software Mentions: 10
Published: about 5 years ago

10.1038/s41598-020-65160-4

Influence of climate variation on phenolic composition and antioxidant capacity of Medicago minima populations
Cited by: 45
Author(s): Souhir Kabtni, Dorra Sdouga, Ines Bettaib Rebey, Mattew Save, Neïla Trifi-Farah, Marie‐Laure Fauconnier, Sonia Marghali
Software Mentions: 10
Published: about 6 years ago

10.3389/fimmu.2021.622563

9-Gene Signature Correlated With CD8+ T Cell Infiltration Activated by IFN-γ: A Biomarker of Immune Checkpoint Therapy Response in Melanoma
Cited by: 17
Author(s): Kexin Yan, Yuxiu Lu, Zhangyong Yan, Yutao Wang
Software Mentions: 10
Published: almost 5 years ago

10.1042/BSR20201734

Identification prognosis-associated immune genes in colon adenocarcinoma
Cited by: 16
Author(s): Yifei Miao, Jiangtao Wang, Xueping Ma, Yuan Yang, Denghai Mi
Software Mentions: 10
Published: over 5 years ago

10.1371/journal.pbio.3001053

Identification of 3′ UTR motifs required for mRNA localization to myelin sheaths in vivo
Cited by: 13
Author(s): Katie M. Yergert, Caleb A. Doll, Rebecca O’Rouke, Jacob H. Hines, Bruce Appel
Software Mentions: 10
Published: over 5 years ago

10.1002/ece3.5599

Linking pollen foraging of megachilid bees to their nest bacterial microbiota
Cited by: 29
Author(s): Anna Voulgari‐Kokota, Markus J. Ankenbrand, Gudrun Grimmer, Ingolf Steffan‐Dewenter, Alexander Keller
Software Mentions: 10
Published: almost 7 years ago

10.3390/jcm10112278

Updates on Children with Allergic Rhinitis and Asthma during the COVID-19 Outbreak
Cited by: 17
Author(s): Giulia Brindisi, Valentina De Vittori, Rosalba De Nola, Elia Pignataro, Caterina Anania, Giovanna De Castro, Bianca Cinicola, Alessandra Gori, Ettore Cicinelli, Anna Maria Zicari
Software Mentions: 10
Published: about 5 years ago

10.3389/fimmu.2016.00372

SONAR: A High-Throughput Pipeline for Inferring Antibody Ontogenies from Longitudinal Sequencing of B Cell Transcripts
Cited by: 52
Author(s): Chaim A. Schramm, Zizhang Sheng, Zhenhai Zhang, John R. Mascola, Peter D. Kwong, Lawrence Shapiro
Software Mentions: 10
Published: over 9 years ago

10.3389/fonc.2021.643465

Identification of the Roles of a Stemness Index Based on mRNA Expression in the Prognosis and Metabolic Reprograming of Pancreatic Ductal Adenocarcinoma
Cited by: 6
Author(s): Rong Tang, Xiaomeng Liu, Wei Wang, Jie Hua, Jin Xu, Chen Liang, Qingcai Meng, Jiang Liu, Bo Zhang, Xianjun Yu, Si Shi
Software Mentions: 10
Published: about 5 years ago

10.3390/ijms22031190

Genome-Wide DNA Methylation Analysis of a Cohort of 41 Patients Affected by Oculo-Auriculo-Vertebral Spectrum (OAVS)
Cited by: 12
Author(s): Valentina Guida, Luciano Calzari, Maria Teresa Fadda, Francesca Piceci‐Sparascio, María Cristina Digilio, Laura Bernardini, Francesco Brancati, Teresa Mattina, Daniela Melis, Francesca Forzano, Silvana Briuglia, Tommaso Mazza, Sebastiano Bianca, Enza Maria Valente, Leila Bagherjad Salehi, Paolo Prontera, Mario Pagnoni, Romano Tenconi, Bruno Dallapiccola, Giorgio Iannetti, Luigi Corsaro, Alessandro De Luca, Davide Gentilini
Software Mentions: 10
Published: over 5 years ago

10.3390/jcm9051572

Eye-Catching Microbes—Polyphasic Analysis of the Microbiota on Microscope Oculars Verifies Their Role as Fomites
Cited by: 3
Author(s): Birgit Fritz, Karin Schäfer, Melanie März, Siegfried Wahl, Focke Ziemssen, Markus Egert
Software Mentions: 10
Published: about 6 years ago

10.3390/nu13061766

Multidimensional Approach to Assess Nutrition and Lifestyle in Breastfeeding Women during the First Month of Lactation
Cited by: 9
Author(s): Andrea Gila-Díaz, Nuria Díaz-Rullo Alcántara, Gloria Herranz Carrillo, Pratibha Singh, Silvia M. Arribas, David Ramiro-Cortijo
Software Mentions: 10
Published: about 5 years ago

10.1371/journal.ppat.1005996

A Mouse Model of Chronic West Nile Virus Disease
Cited by: 44
Author(s): Jessica B. Graham, Jessica L. Swarts, Courtney Wilkins, Sunil Thomas, Richard Green, Aimee Sekine, Kathleen Voss, Reneé C. Ireton, Michael A. Mooney, Gabrielle Choonoo, Darla R. Miller, Piper M. Treuting, Fernando Pardo Manuel de Villena, Martin T. Ferris, Shannon K. McWeeney, Michael Gale, Jennifer M. Lund
Software Mentions: 10
Published: over 9 years ago

10.1002/embj.201386825

Key regulators control distinct transcriptional programmes in blood progenitor and mast cells
Cited by: 48
Author(s): Fernando J. Calero-Nieto, Felicia Ng, Nicola K. Wilson, Rebecca Hannah, Victoria Moignard, Ana Leal-Cervantes, Isabel Jimenez-Madrid, Evangelia Diamanti, Lorenz Wernisch, Berthold Göttgens
Software Mentions: 10
Published: about 12 years ago

10.1186/s13071-020-04461-z

Oviposition of Aedes japonicus japonicus (Diptera: Culicidae) and associated native species in relation to season, temperature and land use in western Germany
Cited by: 12
Author(s): Linus Früh, Helge Kampen, Marcel B. Koban, Nadja Pernat, Günter A. Schaub, Doreen Werner
Software Mentions: 10
Published: over 5 years ago

10.3389/fbioe.2019.00270

Identification of Prognostic and Metastatic Alternative Splicing Signatures in Kidney Renal Clear Cell Carcinoma
Cited by: 46
Author(s): Tong Meng, Runzhi Huang, Zhiwei Zeng, Zongqiang Huang, Huabin Yin, Chenchen Jiao, Penghui Yan, Peng Hu, Xiaolong Zhu, Zhenyu Li, Dianwen Song, Jie Zhang, Liming Cheng
Software Mentions: 10
Published: over 6 years ago

10.1128/mSphere.00334-20

Extreme Viral Partitioning in a Marine-Derived High Arctic Lake
Cited by: 13
Author(s): Myriam Labbé, Catherine Girard, Warwick F. Vincent, Alexander I. Culley
Software Mentions: 10
Published: almost 6 years ago

10.1038/s41422-021-00467-z

Dissecting human embryonic skeletal stem cell ontogeny by single-cell transcriptomic and functional analyses
Cited by: 44
Author(s): Jian He, Yan Jing, Jianfang Wang, Liangyu Zhao, Xin Qian, Yang Zeng, Yuxi Sun, Han Zhang, Zhijie Bai, Zongcheng Li, Yanli Ni, Yandong Gong, Yunqiao Li, Han He, Zhilei Bian, Yu Lan, Chunyu Ma, Lihong Bian, Heng Zhu, Bing Liu, Rui Yue
Software Mentions: 10
Published: over 5 years ago

10.1371/journal.pone.0250477

Geometric morphometric analysis of spore shapes improves identification of fungi
Cited by: 0
Author(s): Alexander Ordynets, Sarah Jayne Kessler, Ewald Langer
Software Mentions: 10
Published: almost 5 years ago

10.1002/bjs.10203

Multicentre prospective cohort study of body mass index and postoperative complications following gastrointestinal surgery
Cited by: 62
Author(s): T M Drake, Dmitri Nepogodiev, Stephen J. Chapman, James C Glasbey, Chetan Khatri, Chia Yew Kong, Henry Claireaux, M F Bath, Midhun Mohan, Lisa McNamee, Michael E. Kelly, Harriet Mitchell, J Edward Fitzgerald, Ewen M Harrison, Aneel Bhangu, Henry Claireaux, Irini M. Antoniou, Richard H. Dean, Natalie A. Davies, Shaun Trecarten, Ian Henderson, Charlotte Holmes, Joanne Wylie, R H Shuttleworth, Anurag Jindal, F Hughes, Pishoy Gouda, Lisa McNamee, Robert Fleck, Michael Hanrahan, Priyadarssini Karunakaran, J H Chen, Mark Sykes, Rajiv K. Sethi, S. Suresh, Panna Patel, M Patel, Rick Varma, Jameel Mushtaq, Buket Gundogan, William Bolton, Midhun Mohan, T Khan, Joshua Burke, R Morley, Nicolò Favero, R. Adams, Vanushia Thirumal, Ewan D. Kennedy, Kenneth Ong, Yulin Tan, Joseph Gabriel, Ali Bakhsh, Jillian Low, Ahmet Levent Yener, Vlad Paraoan, Ryan Preece, Thomas Tilston, Elspeth Cumber, S Dean, Talisa Ross, Eleanor McCance, H. Amin, L. Satterthwaite, Keiran Clement, Robert Gratton, Edward David Mills, Seehui Chiu, Guo Dung Hung, N M Rafiq, John D. Hayes, K Robertson, K Dynes, Han-Sheng Huang, Shershah Assadullah, Joseph W. Duncumb, Richard Moon, Stephanie Poo, J.K. Mehta, K Joshi, Rory Callan, Jonathan Norris, Nicholas Chilvers, Harry Keevil, P Jull, Shweta Mallick, D. Elf, L. M. Carr, C. Player, Ellen C Barton, Aurélie Martin, S.G. Ratu, Elizabeth Roberts, Philippe Phan, A Dyal, Joanne Rogers, Anne Henson, Neil Reid, Dermot Burke, G. Culleton, Sarah D. Lynne, Dermot Burke, Sufyan Mansoor, Caitlin W. Brennan, R. Blessed, Caroline L. Holloway, Arnold D. Hill, Thomas Goldsmith, Sharon Mackin, S Kim, Evelina Woin, Gregory A. Brent, Juli Coffin, Oliver J. Ziff, ZD Momoh, R. K. Debenham, Malik Irfan Ahmed, Cissy Yong, Jonathan Wan, Hannah Charlotte Copley, Pritish Raut, Faraz Chaudhry, R H Shuttleworth, G Nixon, Courtney Dorman, Ryan Choon Kiat Tan, S Kanabar, N. Canning, M. Dolaghan, Nicole S. Bell, Mary McMenamin, Ashok Chhabra, Kathryn Duke, Lindsay C. Turner, Tejal Patel, L S Chew, Mehdi Ali Mirza, Surabhika Lunawat, Babatunde Oremule, Nicholas T. Ward, M Khan, E. Tian Tan, David Roderick Maclennan, Richard McGregor, Elizabeth Chisholm, E J Griffin, Louise Bell, Belinda Hughes, J. Davies, Hafizul Haq, Hussien Ahmed, N. Ungcharoen, C. Whacha, R. Thethi, Rachel Markham, A H Y Lee, ER Batt, Nicholas Bullock, C.T. Francescon, J. Davies, Nusrat Shafiq, Jiashi Zhao, Sayinthen Vivekanantham, Ishani Barai, Jessica L. Allen, Dominic C Marshall, Charlotte McIntyre, Holly Wilson, Anita Ashton, C. Lek, Nebil Behar, M. Davis-Hall, N. Seneviratne, S Kim, Loïc Estève, Mert Sirakaya, S Ali, Scott D. Pope, Jaimo Ahn, Anna Craig-Mcquaide, W.A. Gatfield, Sharon E Leong, A.M. Demetri, Anne Kerr, Clare M. Rees, Jane Loveday, S Liu, Maheshi P C Wijesekera, Dipen M. Maru, Mark Attalla, Nicholas A. Smith, David Esteban Brown, P. Sritharan, Apar Shah, V. Charavanamuttu, G. 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Sundar-Singh, Jonathan Wills, Jameel Mushtaq, Sobia Akhtar, S. Patel, Liu Hu, Charlotte Brathwaite‐Shirley, H Nayee, Oreekha Amin, Tarun Rangan, E Turner, Catherine H McCrann, Rowan Forbes Shepherd, N Patel, J. Prest-Smith, Eric Y Auyoung, A. Murtaza, Amy Coates, O. Prys-Jones, Martin King, Stuart Gaffney, Charlotte Dewdney, I. Nehikhare, Jessica A. Lavery, John Bassett, Kirsty Davies, Kasim Ahmad, A Collins, Meghan Acres, Christine Egerton, T Khan, Ka Ho Cheng, X Chen, Nicholas Chan, A. Sheldon, S. Khan, J. Empey, Emily Ingram, Ali Raza Malik, Marianne Johnstone, R. Goodier, Jigar Shah, Julian Giles, Julie Sanders, Stewart McLure, Sridhar E. Pal, A. Rangedara, A Baker, C.A. Asbjoernsen, C. Girling, Lewis D Gray, L. Gauntlett, C Joyner, Sajid Qureshi, S Dean, Y.P. Mogan, James Ng, Aruna Kumar, J H Park, David Chi Hau Tan, K.P. Choo, Kausalya Raman, P. Buakuma, Chunhong Xiao, S. Govinden, Olof Thompson, M.A. Charalambos, Elliot John Brown, Rickesh Bharat Karsan, Tara Dogra, Laetitia Bullman, Pamela Dawson, Arthur L. Frank, Hèla Ben Abid, Li-Chen Tung, Umer Qureshi, A. Tahmina, Bruce Matthews, R. Harris, A. O'Connor, K. Mazan, Sundas Iqbal, Sophie Stanger, J. Thompson, Jacqueline A. Sullivan, E. Uppal, Ann Macaskill, F.A. Bamgbose, Christina Neophytou, Ashley Carroll, C.W. Rookes, Uttaran Datta, Amrita Dhutia, S Rashid, Nagm Eldin Abu Elnga Ahmed, Terence Lo, Shivam Bhanderi, Christopher Blore, S Ahmed, H. J. Shaheen, S Abburu, S. Majid, Zainab Fadhil Abbas, Sutopa Talukdar, S Ahmed, Laura Burney, Jamie Patel, O Al-Obaedi, Allison Roberts, O Al-Obaedi, Sophia Mahboob, Bhagwan D. Singh, Sangini S. Sheth, Priyesh Karia, A Prabhudesai, Kelvin Kow, Kantida Koysombat, S Wang, Paul J. Morrison, Y. Maheswaran, Philip Keane, Phillip Correia Copley, Oliver Brewster, Guan-Jie Xu, Phillip Harries, Carmel Wall, Alia Al-Mousawi, S. Bonsu, Pedro Cunha, Thomas Ward, Jerry Paul, K. Nadanakumaran, Salim Tayeh, Thomas Ward, H. Holyoak, Jéssica Remédios, K Theodoropoulou, Thomas Ward, A. Luhishi, Louis Jacob, Fang Long, Andrew Atayi, Safdar Sarwar, Olive Parker, Jessica Harvey, Heather Ross, Ritika Rampal, George Thomas, Piyush Vanmali, Catherine C. McGowan, John C. Stein, Vaila Robertson, L. Carthew, Vannesa Yue May Teng, J Fong, Anne Street, Clare Thakker, Derek O’Reilly, Mauro Bravo, Aline Cecília Pizzolato, Haseeb Anwar Khokhar, M. J. Ryan, Lindsay Cheskes, Richard D. Carr, Abdelmonim Salih, S. Bassiony, R. C. F. Yuen, David Chrastek, Hugh O׳Sullivan, Adaugo Amajuoyi, A Wang, O. Sitta, J. Wye, Mubasher A Qamar, C. Y. D. Major, Anjali Kaushal, Catrin Morgan, Maurizio Petrarca, R Allot, Kamlesh Verma, Shoma Dutt, R Allot, Chrissie Chilima, S Peroos, R Allot, Sumitro Kosasih, Hyung-Min Chin, L. Ashken, Rupert Pearse, Robert O'Loughlin, Arathi Menon, Kavindra Singh, Joel Norton, Rebecca Sagar, N. Jathanna, Lincoln Rothwell, Nicholas Watson, Floyd E. Harding, Pierre Dubé, Hassan Khalid, N Punjabi, Markus Sagmeister, Paul Gill, SM Hossain Shahid, Sarah Hudson-Phillips, D. George, J. Scott Ashwood, Thomas Lewis, Mahesh Shanker Dhar, P Sangal, I A Rhema, Dipak Kotecha, Richard H. Dean, Zeeshan Afzal, J.A. Syeed, Esha Prakash, Priya Jalota, Richard H. Dean, Jonathan Blair Thomas Herron, Lawrence M Kimani, A. Delport, Ayushi Shukla, Vani Agarwal, S R Raja Parthiban, Hena Thakur, W Cymes, S Rinkoff, Jennifer Turnbull, Muhammad Hayat, Sarah Darr, UA Khan, Jieqi Lim, Andrew Higgins, Gokul Lakshmipathy, Beniamino Forte, E. Canning, A. Jaitley, Jeffrey P. Lamont, Ethan Toner, Ali Ghaffar, Mark McDowell, Dominique Salmon, Pishoy Gouda, Orla O’Carroll, A Khan, Michael E. Kelly, Katherine Clesham, Cynthia S. Palmer, Rachel Lyons, Michael E. Kelly, Andrew M. Bell, Robin Chin, Ronan Waldron, Michael E. Kelly, Alan S. Trimble, Shanice Cox, Umair Ashfaq, Jill Campbell, Rachel Holliday, George P. McCabe, Frances Morris, R. Priestland, S Dean, Olivia Vernon, A. Ledsam, Rachel Vaughan, Diana Lim, Zoe Bakewell, Rebecca Hughes, R. Koshy, Hunter Jackson, P Narayan, Amy Cardwell, C.L. Jubainville, Tahera Arif, Lucy Elliott, Vidushi Gupta, Tahera Arif, Gayathri Bhaskaran, Kavindra Singh, Adenike Odeleye, Fiza Ahmed, Raahil Shah, Adenike Odeleye, Joe Pickard, Yasir Suleman, Adenike Odeleye, Alexander S North, Liusaidh McClymont, N Hussain, I. Ibrahim, Guat Shi Ng, V. Wai-Sun Wong, Alison Lim, L. Harris, T. Tharmachandirar, Devender Mittapalli, Vimal Patel, Midhat Lakhani, Natalie A. Davies, H.Z. Bazeer, Vishal Narwani, Kulmeet Sandhu, Laura R. Wingfield, Sarah Gentry, Helena Adjei, Muhammad Iqbal Bhatti, Lester Braganza, James R. Barnes, S. Mistry, G. Chillarge, Samantha Stokes, J. Cleere, S. Wadanamby, A.M. Bucko, James Meek, Naomi Boxall, Emily Heywood, Joanne Wiltshire, C. Toh, Alex Ward, Badrun Shurovi, T M Drake, Dillon Horth, Brij Patel, Baqar Ali, Todd Spencer, T. Axelson, L Kretzmer, C. Chhina, C Anandarajah, T. Fautz, Carolyn Horst, A.A. Thevathasan, Jason Ng, F. Hirst, Carole Brewer, Andrew Logan, Joseph Lockey, Paul Forrest, Nigel Keelty, Andrew Wood, Laurie Rigueros Springford, Pascale Avery, Therese Schulz, T.P. Bemand, Lara Howells, Hailey Collier, Apoorva Khajuria, Ravi Tharakan, Sarah Parsons, A M Buchan, Rachel McGalliard, John Mason, Olivia Cundy, N Li, Natalie Redgrave, Rgp Watson, Theodore Pezas, Y Dennis, Emma‐Tina Segall, Mansoor Hameed, Abigail Lynch, M. C. Chamberlain, F S Peck, Yan Ning Neo, George H. Russell, M Elseedawy, S Lee, Naomi Foster, Youn Soo, L. Puan, R Dennis, Harshita Goradia, A. Qureshi, Samah Ibrahim Omer Mohamed Osman Mohamed Osman, Thomas Reeves, L. Dinsmore, M Marsden, Qun Lü, T. Pitts-Tucker, Chris Dunn, Richard Walford, E. Jenny Heathcote, Robert C.G. Martin, Agamemnon Pericleous, K. 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Ramnarine, J. Hartley, Marta Malaj, Paul Jewell, E.A. Whatling, Nadia Hitchen, M Chen, Brian K.P. Goh, Juliana Fern, Sophie Rogers, Laura Derbyshire, David Robertson, N Abuhussein, Praveena Deekonda, Amer Abid, Ali Bakhsh, Peter Harrison, L. Aildasani, Hannah Turley, Mohamed Sherif, Gargi Pandey, Joseph Filby, Andrew James Johnston, Éilish Burke, Mohamed Farah Yusuf Mohamud, Kajal Gohil, A Tsui, Rajdeep Singh, Shujing Jane Lim, Karen O’Sullivan, L.L. McKelvey, Stephen O’Neill, Helen Roberts, F S Brown, Yun Cao, Rory T Buckle, Yao Ren Liew, Samuel S.Y. Sii, Chiara Ventre, Christopher Graham, Teodora Filipescu, Abdallah Yousif, Reetika Dawar, Andrea Wright, Miriam Peters, Rebecca Varley, Sebastian Owczarek, Simon Hartley, Malak Nawaz Khan Khattak, Atif Iqbal, M Ali, B Durrani, Yajur Narang, George Bethell, Laura Horne, Raquel Pinto, Kathleen Nicholls, Ivan Kisyov, Hew D.T. Torrance, Panna Patel, M Patel, William English, Shan Lakhani, S. Ashraf, Mary L Venn, V. 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Matthews, Elizabeth C. Gardner, Charlotte Roberts, E. Kelly Hester, Prasheena Naran, R Simpson, Meenu Minhas, Emily F. Cornish, SH Semnani, Djamila Rojoa, A Radotra, John Eraifej, K. Eparh, Daniel Smith, Bhavin Mistry, Siobhan Hickling, Aneel Bhangu, W. Din, C Liu, Pryankaran Mithrakumar, V. Mirdavoudi, Madeeha Rashid, Clare McGenity, O. Hussain, M Kadicheeni, Hannah Gardner, N. Anim-Addo, Jack C.H. Pearce, Alec Aslanyan, Chara Ntala, T. Sorah, J. Parkin, mohamad alizadeh, Andrew A. White, F. Edozie, J.H. Johnston, A.G. Abdul Kahar, V. Navayogaarajah, Brij Patel, D Carter, Parisa Khonsari, Andrea Burgess, Brij Patel, Chia Kong, Arachchige Ponweera, A. Cody, Yulin Tan, AYKC Ng, A. Croall, Catherine K. Allan, S Ng, V Raghuvir, Richard J. Telfer, Arran Greenhalgh, Caroline McKerr, Marie Alexandra Edison, Bhavin Patel, K L Dear, Myra Hardy, P. Williams, Shamira Hassan, Uzma Sajjad, Eoghan O’Neill, Sofia Jarjour Tavares Starling Lopes, Laura Healy, Norhadziana Jamal, S Tan, D. 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Raji, Thomas Reeves, Nimeshi Jayakody, J. Matthams, Julien Chong, S Tan, CW Luk, Robert Greig, Matthew Trail, George Charalambous, Vanushia Thirumal, Alistair Rocke, N Gardiner, F. A. Bulley, Nicole Warren, Emma Brennan, P. Fergurson, Rebekah Wilson, Heather Whittingham, Elliot John Brown, Rashmi Khanijau, Kejal Gandhi, Steve Morris, A Boulton, Nakul Chandan, A.E. Barthorpe, Ricardo Maamari, Shahneen Sandhu, Michael McCann, Lawrence M. Higgs, V Balian, Craig B. Reeder, Charles Diaper, V Balian, T. A. Sale, Hosam Fathy Ali, V Balian, Carolyn Archer, Anne Clarke, Joseph Heskin, P Hurst, Joel D. Farmer, Lauren O’Flynn, Lan Ðoàn, B A Shuker, G. Stott, N.A. Vithanage, Katie Hoban, P.N. Nesargikar, Helen Kennedy, Cathleen Grossart, Eunicia Tan, Chloe Roy, Pei Yin Sim, Kate Leslie, D P Y Sim, Mehtap Haktanır Abul, Neil Md Cody, Andrea Tay, E Woon, Saretta Sng, Jin Jiun Mah, John Robson, Eathar Shakweh, Victoria C. Wing, Harriet L. Mills, M M Li, Tina Barrow, Sathyan Balaji, Helen Jordan, C. Phillips, Hania Naveed, Shashivadan P. Hirani, A. Tai, Raguprakash Ratnakumaran, A. Sahathevan, Ahmed Mohamed Abdel Shafì, M. A. Seedat, Rupert Weaver, A Batho, R. Punj, Haran Selvachandran, Neel K. Bhatt, S. Botchey, Z. Khonat, Kiva Brennan, Kenneth Ong, Clare Morrison, Eimar Devlin, Anna Linton, Elizabeth Galloway, Susan McGarvie, Norma K.C. Ramsay, H D McRobbie, Harriet Whewell, William H. Dean, S. Nelaj, Mazin Eragat, Aseem Mishra, Tajinder Kane, Mohamed Zuhair, M. Wells, David Wilkinson, N P Woodcock, Elizabeth Sun, Nora Abdul Aziz, Momin Ghaffar
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10.1002/ece3.6079

Species specificity and intraspecific variation in the chemical profiles of Heliconius butterflies across a large geographic range
Cited by: 28
Author(s): Kathy Darragh, Gabriela Montejo‐Kovacevich, Krzysztof M. Kozak, Colin R. Morrison, Clarisse M. É. Figueiredo, Jonathan Stuart Ready, Camilo Salazar, Mauricio Linares, Kelsey J. R. P. Byers, Richard M. Merrill, W. Owen McMillan, Stefan Schulz, Chris D. Jiggins
Software Mentions: 9
Published: about 6 years ago

10.3389/fnbeh.2020.00088

The Influence of Reward on Facial Mimicry: No Evidence for a Significant Effect of Oxytocin
Cited by: 5
Author(s): Irene Trilla, Hanna Drimalla, Malek Bajbouj, Isabel Dziobek
Software Mentions: 9
Published: almost 6 years ago

10.1016/j.celrep.2020.107732

Variable Outcomes in Neural Differentiation of Human PSCs Arise from Intrinsic Differences in Developmental Signaling Pathways
Cited by: 43
Author(s): Alessio Strano, Eleanor J. Tuck, Victoria Stubbs, Frederick J. Livesey
Software Mentions: 9
Published: about 6 years ago

10.1371/journal.pone.0240218

Spatio-temporal modeling of visceral leishmaniasis in Midwest Brazil: An ecological study of 18-years data (2001–2018)
Cited by: 5
Author(s): Everton Falcão de Oliveira, Alessandra Gutierrez de Oliveira, Carla Cardozo Pinto de Arruda, Wagner de Souza Fernandes, Márcio José de Medeiros
Software Mentions: 9
Published: over 5 years ago

10.1038/s41598-021-86871-2

Family-based gene-environment interaction using sequence kernel association test (FGE-SKAT) for complex quantitative traits
Cited by: 0
Author(s): Chao-Yu Guo, Reng-Hong Wang, Hsin-Chou Yang
Software Mentions: 9
Published: about 5 years ago

10.3389/fpls.2019.00910

Characterization of the Wood Mycobiome of Vitis vinifera in a Vineyard Affected by Esca. Spatial Distribution of Fungal Communities and Their Putative Relation With Leaf Symptoms
Cited by: 57
Author(s): Giovanni Del Frari, Alex Gobbi, Marie Rønne Aggerbeck, Helena Oliveira, Lars Hestbjerg Hansen, Ricardo B. Ferreira
Software Mentions: 9
Published: almost 7 years ago

10.1371/journal.pbio.3001158

Disparate temperature-dependent virus–host dynamics for SARS-CoV-2 and SARS-CoV in the human respiratory epithelium
Cited by: 66
Author(s): Philip V’kovski, Mitra Gultom, Jenna N. Kelly, Silvio Steiner, Julie Russeil, Bastien Mangeat, Elisa Cora, Joern Pezoldt, Melle Holwerda, Annika Kratzel, Laura Laloli, Manon Wider, Jasmine Portmann, Thao Thi Phuong Tran, Nadine Ebert, Hanspeter Stalder, Rune Hartmann, Vincent Gardeux, Daniel Alpern, Bart Deplancke, Volker Thiel, Ronald Dijkman
Software Mentions: 9
Published: about 5 years ago

10.1371/journal.pbio.3000202

PlotsOfData—A web app for visualizing data together with their summaries
Cited by: 394
Author(s): Marten Postma, Joachim Goedhart
Software Mentions: 9
Published: about 7 years ago

10.3389/fdata.2020.00015

Improving Diagnosis of Depression With XGBOOST Machine Learning Model and a Large Biomarkers Dutch Dataset (n = 11,081)
Cited by: 42
Author(s): Amita Sharma, W. Verbeke
Software Mentions: 9
Published: about 6 years ago

10.1016/j.celrep.2019.01.041

RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types
Cited by: 510
Author(s): Gianni Monaco, Bernett Lee, Weili Xu, Seri Mustafah, You Yi Hwang, Christophe Carré, Nicolas Burdin, Lucian Visan, Michele Ceccarelli, Michael Poidinger, Alfred Zippelius, João Pedro de Magalhães, Anis Larbi
Software Mentions: 9
Published: over 7 years ago

10.1038/s41421-021-00274-1

Integrating longitudinal clinical laboratory tests with targeted proteomic and transcriptomic analyses reveal the landscape of host responses in COVID-19
Cited by: 21
Author(s): Yun Tan, Wei Zhang, Zhaoqin Zhu, Na Qiao, Yun Ling, Mingquan Guo, Tong Yin, Hai Fang, Xiaoguang Xu, Gang Lu, Peipei Zhang, Shuangshuang Yang, Ziyu Fu, Dongguo Liang, Yinyin Xie, Ruihong Zhang, Lu Jiang, Shuting Yu, Jing Lu, Fang-Ying Jiang, Jian Chen, Chenlu Xiao, Shengyue Wang, Shuo Chen, Xiu‐Wu Bian, Hongzhou Lu, Feng Liu, Sai‐Juan Chen
Software Mentions: 9
Published: almost 5 years ago

10.3389/fmicb.2020.587972

DNA-Stable Isotope Probing Shotgun Metagenomics Reveals the Resilience of Active Microbial Communities to Biochar Amendment in Oxisol Soil
Cited by: 11
Author(s): Julian Yu, Michael J. Pavia, Lauren M. Deem, Susan E. Crow, Jonathan Deenik, C. Ryan Penton
Software Mentions: 9
Published: over 5 years ago

10.1128/mSystems.00897-19

Comparative Analysis of Root Microbiomes of Rice Cultivars with High and Low Methane Emissions Reveals Differences in Abundance of Methanogenic Archaea and Putative Upstream Fermenters
Cited by: 26
Author(s): Zachary Liechty, Christian Santos‐Medellín, Joseph Edwards, Bao‐Anh Thi Nguyen, David Mikhail, Shane Eason, Gregory C. Phillips, Venkatesan Sundaresan
Software Mentions: 9
Published: over 6 years ago

10.1038/s41598-020-62186-6

Site-specific molecular analysis of the bacteriota on worn spectacles
Cited by: 4
Author(s): Birgit Fritz, Melanie März, Severin Weis, Siegfried Wahl, Focke Ziemssen, Markus Egert
Software Mentions: 9
Published: about 6 years ago

10.3389/fonc.2020.573141

Significance of Tumor Mutation Burden in Immune Infiltration and Prognosis in Cutaneous Melanoma
Cited by: 57
Author(s): Kai Kang, Fucun Xie, Jianshan Mao, Yi Bai, Xiang Wang
Software Mentions: 9
Published: over 5 years ago

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