Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1111/pbi.13299

https://doi.org/10.1111/pbi.13299

Learning from methylomes: epigenomic correlates of<i>Populus balsamifera</i>traits based on deep learning models of natural DNA methylation

Cited by: 9
Author(s): Marc J. Champigny, Faride Unda, Oleksandr Skyba, Raju Soolanayakanahally, Shawn D. Mansfield, Malcolm M. Campbell
Published: almost 5 years ago

Software Mentions 10

bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing results
Papers that mentioned: 154
bioconductor: multtest
Resampling-based multiple hypothesis testing
Papers that mentioned: 158
cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
Papers that mentioned: 650
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: multcompView
Visualizations of Paired Comparisons
Papers that mentioned: 66
cran: NeuralNetTools
Visualization and Analysis Tools for Neural Networks
Papers that mentioned: 4
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: pvclust
Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
Papers that mentioned: 442
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
pypi: package
package is a package to package your package
Papers that mentioned: 1,300