Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2019.02476

https://doi.org/10.3389/fmicb.2019.02476

Cited by: 29
Author(s): Cassandra L. Ettinger, Jonathan A. Eisen
Published: over 4 years ago

Software Mentions 10

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
bioconductor: decontam
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data
Papers that mentioned: 76
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: FSA
Simple Fisheries Stock Assessment Methods
Papers that mentioned: 225
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: decontam
Decontaminate paired-end DNA sequencing data
Papers that mentioned: 76
pypi: FSA
Finite State Automaton library
Papers that mentioned: 225
pypi: run
Python Process Run Control
Papers that mentioned: 35