Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1126/sciadv.aaz1138

https://doi.org/10.1126/sciadv.aaz1138

Two different epigenetic information channels in wild three-spined sticklebacks are involved in salinity adaptation

Cited by: 76
Author(s): Melanie J. Heckwolf, Britta Meyer, Robert Häsler, Marc P. Höppner, Christophe Eizaguirre, Thorsten B. H. Reusch
Published: over 4 years ago

Software Mentions 9

bioconductor: genomation
Summary, annotation and visualization of genomic data
Papers that mentioned: 17
bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
bioconductor: GOstats
Tools for manipulating GO and microarrays
Papers that mentioned: 368
bioconductor: GSEABase
Gene set enrichment data structures and methods
Papers that mentioned: 79
bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing results
Papers that mentioned: 154
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562