Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-021-07388-6

https://doi.org/10.1186/s12864-021-07388-6

Phenotype and multi-omics comparison of Staphylococcus and Streptococcus uncovers pathogenic traits and predicts zoonotic potential

Cited by: 3
Author(s): Niels A. Zondervan, Vítor A. P. Martins dos Santos, María Suárez-Diez, Edoardo Saccenti
Published: almost 4 years ago

Software Mentions 10

bioconductor: GEM
GEM: fast association study for the interplay of Gene, Environment and Methylation
Papers that mentioned: 317
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: heatmaply
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'
Papers that mentioned: 45
cran: micropan
Microbial Pan-Genome Analysis
Papers that mentioned: 19
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
cran: SAPP
Statistical Analysis of Point Processes
Papers that mentioned: 18
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
pypi: SPARQLWrapper
SPARQL Endpoint interface to Python
Papers that mentioned: 2