Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-017-1936-x

https://doi.org/10.1186/s12859-017-1936-x

Software for rapid time dependent ChIP-sequencing analysis (TDCA)

Cited by: 1
Author(s): Mike Myschyshyn, Marco Farren-Dai, Tien-Jui Chuang, David J. Vocadlo
Published: almost 7 years ago

Software Mentions 9

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
cran: drc
Analysis of Dose-Response Curves
Papers that mentioned: 291
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: plot3D
Plotting Multi-Dimensional Data
Papers that mentioned: 47
cran: rgl
3D Visualization Using OpenGL
Papers that mentioned: 156
pypi: drc
Django comment module using in reactJS
Papers that mentioned: 291