Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41396-020-00777-x

https://doi.org/10.1038/s41396-020-00777-x

A network approach to elucidate and prioritize microbial dark matter in microbial communities

Cited by: 71
Author(s): Tatyana Zamkovaya, Jamie S. Foster, Valérie de Crécy‐Lagard, Ana Conesa
Published: about 4 years ago

Software Mentions 10

bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555