Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12920-020-00754-5

https://doi.org/10.1186/s12920-020-00754-5

Cited by: 15
Author(s): Junguo Zhang, Xin Huang, Xiaojie Wang, Yanhui Gao, Li Liu, Ziyi Li, Xuejiao Chen, Jie Zeng, Zebing Ye, Guowei Li
Published: almost 4 years ago

Software Mentions 10

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DOSE
Disease Ontology Semantic and Enrichment analysis
Papers that mentioned: 138
bioconductor: graphite
GRAPH Interaction from pathway Topological Environment
Papers that mentioned: 30
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: pathview
a tool set for pathway based data integration and visualization
Papers that mentioned: 144
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
pypi: ggplot
ggplot for python
Papers that mentioned: 796
pypi: graphite
Papers that mentioned: 30