Packages with Software Mentions in Scientific Papers

A simple package that provides a single decorator for you to mark functions as tasks (routines) that should be executed on a regular schedule.
Papers that mentioned: 6

Very Likely Science (65)

pypi: Aggregator

Aggregation of data from high to coarse resolution.
Papers that mentioned: 6

Very Likely Science (80)

pypi: general

general
Papers that mentioned: 6

Very Likely Science (65)

cran: oro.nifti

Rigorous - 'NIfTI' + 'ANALYZE' + 'AFNI' : Input / Output
Papers that mentioned: 6

Very Likely Science (75)

pypi: autoreject

Automated rejection and repair of epochs in M/EEG.
Papers that mentioned: 6

Very Likely Science (100)

pypi: Arabic

Arabic tools implemented in pure Python
Papers that mentioned: 6

Very Likely Science (65)

cran: particles

A Graph Based Particle Simulator Based on D3-Force
Papers that mentioned: 6

Very Likely Science (75)

cran: blavaan

Bayesian Latent Variable Analysis
Papers that mentioned: 6

Very Likely Science (93)

pypi: Checkm

Checkm - create reports on the checksums of sets of files or URLs resources.
Papers that mentioned: 6

Very Likely Science (65)

pypi: Saturn

Simple functions for tz-aware datetimes.
Papers that mentioned: 6

Very Likely Science (65)

pypi: tsinfer

Infer tree sequences from genetic variation data.
Papers that mentioned: 6

Very Likely Science (90)

cran: mlVAR

Multi-Level Vector Autoregression
Papers that mentioned: 6

Very Likely Science (85)

cran: ModelMap

Modeling and Map Production using Random Forest and Related Stochastic Models
Papers that mentioned: 6

Very Likely Science (85)

cran: arrow

Integration to 'Apache' 'Arrow'
Papers that mentioned: 6

Very Likely Science (100)

pypi: Behaviour

Behaviour Driven Development in Python
Papers that mentioned: 6

Very Likely Science (65)

cran: dispRity

Measuring Disparity
Papers that mentioned: 6

Very Likely Science (100)

cran: cocron

Statistical Comparisons of Two or more Alpha Coefficients
Papers that mentioned: 6

Very Likely Science (85)

cran: geesmv

Modified Variance Estimators for Generalized Estimating Equations
Papers that mentioned: 6

Very Likely Science (85)

pypi: plfit

Python implementation of Aaron Clauset's power-law distribution fitter
Papers that mentioned: 6

Very Likely Science (85)

pypi: home

Home automation by @d0ugal.
Papers that mentioned: 6

Very Likely Science (65)

pypi: logger

Python logging helper
Papers that mentioned: 6

Very Likely Science (65)

cran: R2HTML

HTML Exportation for R Objects
Papers that mentioned: 6

Very Likely Science (95)

pypi: dis

A simple test
Papers that mentioned: 6

Very Likely Science (65)

pypi: Pythonic

Graphical automation tool
Papers that mentioned: 6

Very Likely Science (65)

cran: xml2

Parse XML
Papers that mentioned: 6

Very Likely Science (83)

cran: RVtests

Rare Variant Tests
Papers that mentioned: 6

Very Likely Science (75)

cran: assertthat

Easy Pre and Post Assertions
Papers that mentioned: 6

Very Likely Science (83)

cran: StreamMetabolism

Calculate Single Station Metabolism from Diurnal Oxygen Curves
Papers that mentioned: 6

Very Likely Science (75)

pypi: light

TODO.
Papers that mentioned: 6

Likely Science (55)

pypi: limix

Genetic analysis toolbox using mixed models
Papers that mentioned: 6

Very Likely Science (100)

cran: ScottKnott

The ScottKnott Clustering Algorithm
Papers that mentioned: 6

Very Likely Science (85)

pypi: faraway

Datasets and utilities to support books by Julian Faraway
Papers that mentioned: 6

Very Likely Science (65)

pypi: scope

Template library for multi-language code generation
Papers that mentioned: 6

Very Likely Science (65)

pypi: NCGR

A Python package for calibrating probabilistic sea-ice retreatand advance date forecasts using non-homogeneous censored Gaussian regression
Papers that mentioned: 6

Very Likely Science (95)

cran: grplasso

Fitting User-Specified Models with Group Lasso Penalty
Papers that mentioned: 6

Very Likely Science (75)

pypi: PyYAML

YAML parser and emitter for Python
Papers that mentioned: 6

Very Likely Science (100)

bioconductor: INSPEcT

Modeling RNA synthesis, processing and degradation with RNA-seq data
Papers that mentioned: 6

Very Likely Science (100)

cran: STV

Single Transferable Vote Counting
Papers that mentioned: 6

Very Likely Science (100)

pypi: Tour

Papers that mentioned: 6

Very Likely Science (65)

pypi: OCAT

A new single-cell analytics framework
Papers that mentioned: 6

Very Likely Science (75)

pypi: spot

DotCloud environment loader
Papers that mentioned: 6

Very Likely Science (65)

pypi: lsm

Python bindings for SQLite's LSM key/value engine
Papers that mentioned: 6

Very Likely Science (65)

pypi: empower

Goodbye Inheritance
Papers that mentioned: 6

Very Likely Science (65)

cran: mashr

Multivariate Adaptive Shrinkage
Papers that mentioned: 6

Very Likely Science (100)

cran: mason

Build Data Structures for Common Statistical Analysis
Papers that mentioned: 6

Very Likely Science (85)

pypi: SDST

Useful routines to perform NGS data analysis tasks
Papers that mentioned: 6

Very Likely Science (95)

pypi: Emulator

Python-Flask application to emulate IoT devices
Papers that mentioned: 6

Very Likely Science (65)

pypi: neurosynth

Large-scale synthesis of functional neuroimaging data
Papers that mentioned: 6

Very Likely Science (100)

pypi: cs

A simple yet powerful CloudStack API client for Python and the command-line.
Papers that mentioned: 6

Very Likely Science (65)

pypi: iSearch

有道词典单词查询、存储和管理的命令行工具
Papers that mentioned: 6

Very Likely Science (65)

pypi: setuptools

Easily download, build, install, upgrade, and uninstall Python packages
Papers that mentioned: 6

Very Likely Science (100)

pypi: Oak

A simple static-blog generator
Papers that mentioned: 6

Likely Science (40)

pypi: polar

Data Science Library
Papers that mentioned: 6

Very Likely Science (75)

pypi: KrATER

Papers that mentioned: 6

Very Likely Science (65)

pypi: pol

pol, a modern password manager
Papers that mentioned: 6

Very Likely Science (65)

cran: Temporal

Parametric Time to Event Analysis
Papers that mentioned: 6

Very Likely Science (93)

bioconductor: CFAssay

Statistical analysis for the Colony Formation Assay
Papers that mentioned: 6

Very Likely Science (100)

pypi: Phidgets

Python Wrapper library for the Phidgets API
Papers that mentioned: 6

Very Likely Science (65)

pypi: spreadsheet

A tool to manipulate Google Spreadsheets
Papers that mentioned: 6

Very Likely Science (65)

cran: table1

Tables of Descriptive Statistics in HTML
Papers that mentioned: 6

Very Likely Science (85)

pypi: purge

Delete temp file as per patthen
Papers that mentioned: 6

Very Likely Science (65)

pypi: bfc

Papers that mentioned: 6

Very Likely Science (65)

pypi: psycopg2

psycopg2 - Python-PostgreSQL Database Adapter
Papers that mentioned: 6

Very Likely Science (85)

pypi: spyder

The Scientific Python Development Environment
Papers that mentioned: 6

Very Likely Science (90)

cran: grade

Binary Grading functions for R
Papers that mentioned: 6

Very Likely Science (95)

cran: tablet

Tabulate Descriptive Statistics in Multiple Formats
Papers that mentioned: 6

Very Likely Science (85)

pypi: sorter

A program to rename media files and store them
Papers that mentioned: 6

Likely Science (40)

bioconductor: autonomics

Generifying and intuifying cross-platform omics analysis
Papers that mentioned: 6

Very Likely Science (100)

pypi: gpr

Parse GCODE
Papers that mentioned: 6

Very Likely Science (65)

cran: DTR

Estimation and Comparison of Dynamic Treatment Regimes
Papers that mentioned: 6

Very Likely Science (83)

pypi: Wallace

An API for modeling data with psycopg2, redis-py, and pymongo.
Papers that mentioned: 6

Very Likely Science (75)

pypi: plier

Utilities for PLY (Python Lex & Yacc)
Papers that mentioned: 6

Very Likely Science (80)

pypi: sniffer

An automatic test runner. Supports nose out of the box.
Papers that mentioned: 6

Very Likely Science (65)

pypi: MiModD

Tools for Mutation Identification in Model Organism Genomes using Desktop PCs
Papers that mentioned: 6

Very Likely Science (80)

pypi: spectral

Spectral Python (SPy) is a Python module for hyperspectral image processing.
Papers that mentioned: 6

Very Likely Science (80)

cran: mco

Multiple Criteria Optimization Algorithms and Related Functions
Papers that mentioned: 6

Very Likely Science (85)

pypi: Portfolio

A framework for portfolio analysis using python
Papers that mentioned: 6

Very Likely Science (75)

pypi: pyprophet

PyProphet: Semi-supervised learning and scoring of OpenSWATH results.
Papers that mentioned: 6

Very Likely Science (100)

pypi: pyserial

Python Serial Port Extension
Papers that mentioned: 6

Very Likely Science (65)

cran: detect

Analyzing Wildlife Data with Detection Error
Papers that mentioned: 6

Very Likely Science (100)

cran: simecol

Simulation of Ecological (and Other) Dynamic Systems
Papers that mentioned: 6

Very Likely Science (85)

pypi: SISO

Papers that mentioned: 6

Very Likely Science (65)

cran: MaxPro

Maximum Projection Designs
Papers that mentioned: 6

Very Likely Science (75)

pypi: tablet

A tiny spreadsheet-like data structure and tool
Papers that mentioned: 6

Very Likely Science (65)

pypi: klusta

Spike detection and automatic clustering for spike sorting
Papers that mentioned: 6

Very Likely Science (80)

cran: admixr

An Interface for Running 'ADMIXTOOLS' Analyses
Papers that mentioned: 5

Very Likely Science (100)

pypi: factanal

A python wrapper for the R function factanal.
Papers that mentioned: 5

Very Likely Science (65)

pypi: dtreeviz

A Python 3 library for sci-kit learn, XGBoost, LightGBM, Spark, and TensorFlow decision tree visualization
Papers that mentioned: 5

Very Likely Science (100)

pypi: es

A Python Event-Sourcing (ES) framework.
Papers that mentioned: 5

Very Likely Science (65)

pypi: Maga

A DHT crawler framework using asyncio.
Papers that mentioned: 5

Very Likely Science (65)