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Projects: pypi: Checkm

https://packages.ecosyste.ms/registries/pypi.org/packages/Checkm

Checkm - create reports on the checksums of sets of files or URLs resources.
12 versions
Latest release: about 15 years ago
38 downloads last month

Science Score: 65/100
Starting Score: 100 points
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (65)

Papers Mentioning Checkm 6

10.1186/s13068-016-0534-x
Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies
Cited by: 107
Author(s): Simon Güllert, Martin Fischer, Dmitrij Turaev, Britta Noebauer, Nele Ilmberger, Bernd Wemheuer, Malik Alawi, Thomas Rattei, Rolf Daniel, Ruth A. Schmitz, Adam Grundhoff, Wolfgang R. Streit
Software Mentions: 3
Published: about 10 years ago
10.1186/s13068-018-1214-9
A metagenomic analysis of the camel rumen’s microbiome identifies the major microbes responsible for lignocellulose degradation and fermentation
Cited by: 82
Author(s): Javad Gharechahi, Ghasem Hosseini Salekdeh
Software Mentions: 2
Published: almost 8 years ago
10.3389/fmicb.2017.01849
Reclassification of Paenibacillus riograndensis as a Genomovar of Paenibacillus sonchi: Genome-Based Metrics Improve Bacterial Taxonomic Classification
Cited by: 24
Author(s): Fernando Hayashi Sant’Anna, Adriana Ambrosini, Rocheli de Souza, Gabriela de Carvalho Fernandes, Evelise Bach, Eduardo Balsanelli, Valter A. Baura, Luciana Fernandes de Brito, Volker F. Wendisch, Fábio de Oliveira Pedrosa, Emanuel Maltempi de Souza, Luciane Maria Pereira Passaglia
Software Mentions: 2
Published: over 8 years ago
10.1073/pnas.2104378118
Global biogeography of chemosynthetic symbionts reveals both localized and globally distributed symbiont groups
Cited by: 11
Author(s): Jay T Osvatic, Laetitia G. E. Wilkins, Lukas Leibrecht, Matthieu Leray, Sarah Zauner, Julia Polzin, Yolanda Camacho, Olivier Gros, Jan A. van Gils, Jonathan A. Eisen, Jillian M. Petersen, Benedict Yuen
Software Mentions: 2
Published: almost 5 years ago
10.1186/s12864-016-3058-7
Whole genome sequence analysis indicates recent diversification of mammal-associated Campylobacter fetus and implicates a genetic factor associated with H2S production
Cited by: 17
Author(s): Linda van der Graaf–van Bloois, Birgitta Duim, William G. Miller, Ken J. Forbes, Jaap A. Wagenaar, Aldert Zomer
Software Mentions: 1
Published: almost 10 years ago
10.1371/journal.pone.0183925
Development of a real-time PCR for detection of Staphylococcus pseudintermedius using a novel automated comparison of whole-genome sequences
Cited by: 11
Author(s): Koen M. Verstappen, Loes Huijbregts, Mirlin Spaninks, Jaap A. Wagenaar, Ad C. Fluit, Birgitta Duim
Software Mentions: 1
Published: almost 9 years ago