Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13068-016-0534-x

https://doi.org/10.1186/s13068-016-0534-x

Deep metagenome and metatranscriptome analyses of microbial communities affiliated with an industrial biogas fermenter, a cow rumen, and elephant feces reveal major differences in carbohydrate hydrolysis strategies

Cited by: 107
Author(s): Simon Güllert, Martin Fischer, Dmitrij Turaev, Britta Noebauer, Nele Ilmberger, Bernd Wemheuer, Malik Alawi, Thomas Rattei, Rolf Daniel, Ruth A. Schmitz, Adam Grundhoff, Wolfgang R. Streit
Published: over 8 years ago

Software Mentions 3

pypi: Checkm
Checkm - create reports on the checksums of sets of files or URLs resources.
Papers that mentioned: 6
pypi: hmmer
HMMER binaries.
Papers that mentioned: 196
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071