Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: GenAPI

https://packages.ecosyste.ms/registries/pypi.org/packages/GenAPI

A Python API for the Genesis platform.
6 versions
Latest release: about 10 years ago
896 downloads last month

Papers Mentioning GenAPI 6

Achromobacter spp. genetic adaptation in cystic fibrosis
Cited by: 4
Author(s): Miglė Gabrielaitė, Finn C. Nielsen, Helle Krogh Johansen, Rasmus Lykke Marvig
Software Mentions: 4
Published: over 3 years ago

10.1186/s12859-020-03657-5

GenAPI: a tool for gene absence-presence identification in fragmented bacterial genome sequences
Cited by: 17
Author(s): Miglė Gabrielaitė, Rasmus Lykke Marvig
Software Mentions: 3
Published: over 4 years ago

10.1128/mBio.02359-20

Gene Loss and Acquisition in Lineages of Pseudomonas aeruginosa Evolving in Cystic Fibrosis Patient Airways
Cited by: 26
Author(s): Miglė Gabrielaite, Helle Krogh Johansen, Søren Molin, Finn C. Nielsen, Rasmus Lykke Marvig
Software Mentions: 3
Published: about 4 years ago

10.1128/mSystems.00889-21

A Combination of Metagenomic and Cultivation Approaches Reveals Hypermutator Phenotypes within Vibrio cholerae-Infected Patients
Cited by: 7
Author(s): Inès Levade, Ashraful Islam Khan, Fahima Chowdhury, Stephen B. Calderwood, Edward T. Ryan, Jason B. Harris, Regina C. LaRocque, Taufiqur Rahman Bhuiyan, Firdausi Qadri, Ana A. Weil, Ben Shapiro
Software Mentions: 3
Published: over 3 years ago

10.1002/mbo3.941

Mutational change of CTX‐M‐15 to CTX‐M‐127 resulting in mecillinam resistant <i>Escherichia coli</i> during pivmecillinam treatment of a patient
Cited by: 7
Author(s): Karen Leth Nielsen, Katrine Hartung Hansen, Julius Nielsen, Jenny Dahl Knudsen, Kristian Schønning, Niels Frimodt‐Møller, Frederik Boëtius Hertz, Filip Jansåker
Software Mentions: 1
Published: about 5 years ago

10.1128/JCM.02911-20

Transmission and Antibiotic Resistance of <i>Achromobacter</i> in Cystic Fibrosis
Cited by: 28
Author(s): Miglė Gabrielaitė, Jennifer A. Bartell, Niels Nørskov‐Lauritsen, Tacjana Pressler, Finn C. Nielsen, Helle Krogh Johansen, Rasmus Lykke Marvig
Software Mentions: 1
Published: almost 4 years ago