Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSystems.00889-21

https://doi.org/10.1128/mSystems.00889-21

A Combination of Metagenomic and Cultivation Approaches Reveals Hypermutator Phenotypes within Vibrio cholerae-Infected Patients

Cited by: 7
Author(s): Inès Levade, Ashraful Islam Khan, Fahima Chowdhury, Stephen B. Calderwood, Edward T. Ryan, Jason B. Harris, Regina C. LaRocque, Taufiqur Rahman Bhuiyan, Firdausi Qadri, Ana A. Weil, Ben Shapiro
Published: over 3 years ago

Software Mentions 3

pypi: GenAPI
A Python API for the Genesis platform.
Papers that mentioned: 6
pypi: illumina-utils
A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.8+).
Papers that mentioned: 22
pypi: iRep
calcualte iRep replication rates from metagenome sequencing
Papers that mentioned: 29