Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: INSPEcT
https://packages.ecosyste.ms/registries/bioconductor.org/packages/INSPEcT
Modeling RNA synthesis, processing and degradation with RNA-seq data
1 version
Latest release: 10 months ago
12,381 downloads total
Papers Mentioning INSPEcT 6
10.15252/embj.2020104569
Translation is required for miRNA‐dependent decay of endogenous transcriptsCited by: 15
Author(s): Adriano Biasini, Baroj Abdulkarim, Stefano de Pretis, Jennifer Y. Tan, Rajika Arora, Harry Wischnewski, René Dreos, Mattia Pelizzola, Constance Ciaudo, Ana C. Marques
Software Mentions: 6
Published: over 3 years ago
10.1038/s41419-021-04169-7
New insight into the catalytic -dependent and -independent roles of METTL3 in sustaining aberrant translation in chronic myeloid leukemiaCited by: 16
Author(s): Zaira Ianniello, Melissa Sorci, Lavinia Ceci Ginistrelli, Alessia Iaiza, Marcella Marchioni, Claudia Tito, Ernestina Capuano, Silvia Masciarelli, Tiziana Ottone, Cristina Attrotto, Manuela Rizzo, Luca Franceschini, Stefano de Pretis, Maria Teresa Voso, Mattia Pelizzola, Francesco Fazi, Alessandro Fatica
Software Mentions: 5
Published: almost 3 years ago
10.7717/peerj.9371
pulseTD: RNA life cycle dynamics analysis based on pulse model of 4sU-seq time course sequencing dataCited by: 0
Author(s): Xin Wang, Siyu He, Jian Li, Jun Wang, Chengyi Wang, Mingwei Wang, Danni He, Xingfeng Lv, Qiuyan Zhong, Hongjiu Wang, Zhenzhen Wang
Software Mentions: 4
Published: about 4 years ago
10.3390/genes10010028
m6A-Dependent RNA Dynamics in T Cell DifferentiationCited by: 30
Author(s): Mattia Furlan, Eugenia Galeota, Stefano de Pretis, Michele Caselle, Mattia Pelizzola
Software Mentions: 3
Published: over 5 years ago
10.3389/fgene.2020.00759
INSPEcT-GUI Reveals the Impact of the Kinetic Rates of RNA Synthesis, Processing, and Degradation, on Premature and Mature RNA SpeciesCited by: 7
Author(s): Stefano de Pretis, Mattia Furlan, Mattia Pelizzola
Software Mentions: 1
Published: about 4 years ago
10.3389/fgene.2020.00394
Direct RNA Sequencing for the Study of Synthesis, Processing, and Degradation of Modified TranscriptsCited by: 11
Author(s): Mattia Furlan, Iris Tanaka, Tommaso Leonardi, Stefano de Pretis, Mattia Pelizzola
Software Mentions: 1
Published: about 4 years ago