Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.9371

https://doi.org/10.7717/peerj.9371

pulseTD: RNA life cycle dynamics analysis based on pulse model of 4sU-seq time course sequencing data

Cited by: 0
Author(s): Xin Wang, Siyu He, Jian Li, Jun Wang, Chengyi Wang, Mingwei Wang, Danni He, Xingfeng Lv, Qiuyan Zhong, Hongjiu Wang, Zhenzhen Wang
Published: about 4 years ago

Software Mentions 4

bioconductor: DTA
Dynamic Transcriptome Analysis
Papers that mentioned: 21
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
bioconductor: INSPEcT
Modeling RNA synthesis, processing and degradation with RNA-seq data
Papers that mentioned: 6
cran: pulseTD
Identification of Transcriptional Dynamics using Pulse Models via 4su-Seq Data and RNA-Seq Data
Papers that mentioned: 1