pypi: panel
The powerful data exploration & web app framework for Python.
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cran: inTrees
Interpret Tree Ensembles
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pypi: body
Calculating metric height and weight
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pypi: tslearn
A machine learning toolkit dedicated to time-series data
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cran: bsts
Bayesian Structural Time Series
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pypi: routine
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pypi: rtf
Remote Tensorflow Execution (rtf): gRPC server and clients generators
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pypi: tide
From text editor to Integrated Development Environment. This allows you to use a yaml config and some scripting to deliver cross-platform, cross-editor plugins.
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bioconductor: affyio
Tools for parsing Affymetrix data files
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pypi: mg
Machine Learning Extensions
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cran: fugue
Sensitivity Analysis Optimized for Matched Sets of Varied Sizes
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cran: tweedie
Evaluation of Tweedie Exponential Family Models
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cran: MATA
Model-Averaged Tail Area (MATA) Confidence Interval and Distribution
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pypi: VaLID
A language identification system based on prediction by partial matching (PPM) compression
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pypi: JSBSim
An open source flight dynamics & control software library
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cran: Corbi
Collection of Rudimentary Bioinformatics Tools
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pypi: metano
metano - A Toolkit for Metabolic Network Analysis and Optimization
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cran: unittest
TAP-Compliant Unit Testing
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cran: pals
Color Palettes, Colormaps, and Tools to Evaluate Them
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bioconductor: MGFM
Marker Gene Finder in Microarray gene expression data
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pypi: expm
Faster matrix exponentials in Python
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cran: rLakeAnalyzer
Lake Physics Tools
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cran: omu
A Metabolomics Analysis Tool for Intuitive Figures and Convenient Metadata Collection
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cran: set
Set Operation
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bioconductor: EBcoexpress
EBcoexpress for Differential Co-Expression Analysis
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pypi: genalg
A generalizable genetic algorithm package written in Python.
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cran: kml3d
K-Means for Joint Longitudinal Data
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pypi: meg
MATLAB engine connector
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pypi: BioCAT
NRP biosynthesis Cluster Analysis Tool)
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cran: nonlinearTseries
Nonlinear Time Series Analysis
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cran: ebdbNet
Empirical Bayes Estimation of Dynamic Bayesian Networks
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pypi: FlowCytometryTools
A python package for performing flow cytometry analysis
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pypi: ci
Easily run common CI tasks for Python builds.
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pypi: Argonaut
Lightweight Pylons powered blogging engine.
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bioconductor: MethPed
A DNA methylation classifier tool for the identification of pediatric brain tumor subtypes
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cran: ExpDes.pt
Pacote Experimental Designs (Portugues)
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pypi: bc
A small example package
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pypi: kb-python
Python wrapper around kallisto | bustools for scRNA-seq analysis
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pypi: rev
Command line utility that reverses strings with varying granularities
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cran: pan
Multiple Imputation for Multivariate Panel or Clustered Data
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pypi: CellStar
Algorithm for round cells identification in the brightfield microscopy images.
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cran: lsa
Latent Semantic Analysis
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pypi: BTM
Blood Transcription Modules for transcriptomics analysis
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cran: activity
Animal Activity Statistics
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pypi: bingo
Bingo is a library that creates bingo cards and game raffles
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cran: pkgdown
Make Static HTML Documentation for a Package
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pypi: correlation
Calculate the confidence intervals of correlation coeficients
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bioconductor: EventPointer
An effective identification of alternative splicing events using junction arrays and RNA-Seq data
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cran: MLDS
Maximum Likelihood Difference Scaling
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cran: ds
Descriptive Statistics
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cran: stars
Spatiotemporal Arrays, Raster and Vector Data Cubes
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bioconductor: MetID
Network-based prioritization of putative metabolite IDs
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pypi: castor
Assemble Git repos into a deployable tree of code.
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pypi: collapse
Collapse
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cran: CVR
Canonical Variate Regression
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pypi: nn
A neural network library built on top of TensorFlow for quickly building deep learning models.
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pypi: graphml
TBD
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pypi: imshow
Command line tool to visualize numeric arrays.
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pypi: SDG
Synthetic Data Generation (SDG) for tabular data and time series
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pypi: scam
Source Code Analyzing Maching is an application for the analysis of similarities between source code files. Currently with Python, Java, C, and C++ file checking capabilities.
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pypi: INI
Simple json/pickle like ini-file parsing.
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cran: digitize
Use Data from Published Plots in R
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cran: slim
Singular Linear Models for Longitudinal Data
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cran: CPP
Composition of Probabilistic Preferences (CPP)
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cran: SimComp
Simultaneous Comparisons for Multiple Endpoints
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cran: BTM
Biterm Topic Models for Short Text
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pypi: inStrain
Calculation of strain-level metrics
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cran: simex
SIMEX- And MCSIMEX-Algorithm for Measurement Error Models
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cran: RLT
Reinforcement Learning Trees
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cran: RIA
Radiomics Image Analysis Toolbox for Medial Images
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pypi: Doric
Doric is a lightweight library for implementing and extending progressive neural networks.
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pypi: nmap
Map numbers from one range to another
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cran: drfit
Dose-Response Data Evaluation
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cran: correlation
Methods for Correlation Analysis
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pypi: nCoV
Get instant information about 2019-nCoV
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pypi: diva
Analytics dashboards made simple
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cran: elevatr
Access Elevation Data from Various APIs
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cran: STARTS
Functions for the STARTS Model
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pypi: cna
covarying neighborhood analysis
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cran: referenceIntervals
Reference Intervals
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cran: wgaim
Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R
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bioconductor: segmentSeq
Methods for identifying small RNA loci from high-throughput sequencing data
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cran: rdist
Calculate Pairwise Distances
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pypi: hctsa
Human-Centered TimeSeries Analysis Package
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cran: scico
Colour Palettes Based on the Scientific Colour-Maps
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pypi: Dot-Plot
Dot plot is a tool for creating images of chord and scale diagrams for fretboard instruments like guitar, bass, ukulele, viola da gamba etc
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cran: collapse
Advanced and Fast Data Transformation
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cran: scam
Shape Constrained Additive Models
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cran: textmineR
Functions for Text Mining and Topic Modeling
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cran: ggDCA
Calculate and Plot Decision Curve
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cran: tkrplot
TK Rplot
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pypi: copula
A python library for sampling and generating new Data points by multivariate Gaussian copulas.
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cran: srvyr
'dplyr'-Like Syntax for Summary Statistics of Survey Data
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cran: rtf
Rich Text Format (RTF) Output
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cran: supclust
Supervised Clustering of Predictor Variables Such as Genes
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cran: ssfit
Fitting of Parametric Models using Summary Statistics
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pypi: Goodreads
Python wrapper for Goodreads API
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pypi: EPMS
The Expressive Polyphonic MIDI Serializer is a tool to turn MIDI files into a model-friendly, expressive representation for ML projects.
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cran: simpleboot
Simple Bootstrap Routines
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cran: profvis
Interactive Visualizations for Profiling R Code
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