Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: UTRme

https://packages.ecosyste.ms/registries/pypi.org/packages/UTRme

UTRme
20 versions
Latest release: almost 6 years ago
21 downloads last month

Papers Mentioning UTRme 5

SLIDR and SLOPPR: flexible identification of spliced leader trans-splicing and prediction of eukaryotic operons from RNA-Seq data
Cited by: 7
Author(s): Marius Wenzel, Berndt Müller, Jonathan Pettitt
Software Mentions: 8
Published: over 3 years ago

10.3389/fgene.2018.00671

UTRme: A Scoring-Based Tool to Annotate Untranslated Regions in Trypanosomatid Genomes
Cited by: 20
Author(s): Santiago Radío, Rafael Sebastián Fort, Beatríz Garat, José Sotelo‐Silveira, Pablo Smircich
Software Mentions: 5
Published: almost 6 years ago

10.1186/s12859-020-03610-6

SLFinder, a pipeline for the novel identification of splice-leader sequences: a good enough solution for a complex problem
Cited by: 3
Author(s): Javier Calvelo, Hernán Juan, Héctor Musto, Uriel Koziol, Andrés Iriarte
Software Mentions: 2
Published: over 4 years ago

10.3389/fgene.2020.00166

Upstream ORFs Influence Translation Efficiency in the Parasite Trypanosoma cruzi
Cited by: 7
Author(s): Santiago Radío, Beatríz Garat, José Sotelo‐Silveira, Pablo Smircich
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0215160

Conserved motifs in nuclear genes encoding predicted mitochondrial proteins in Trypanosoma cruzi
Cited by: 5
Author(s): Lorena Becco, Pablo Smircich, Beatríz Garat
Software Mentions: 1
Published: over 5 years ago