Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-021-04009-7

https://doi.org/10.1186/s12859-021-04009-7

SLIDR and SLOPPR: flexible identification of spliced leader trans-splicing and prediction of eukaryotic operons from RNA-Seq data

Cited by: 7
Author(s): Marius Wenzel, Berndt Müller, Jonathan Pettitt
Published: over 3 years ago

Software Mentions 8

cran: ggdendro
Create Dendrograms and Tree Diagrams Using 'ggplot2'
Papers that mentioned: 48
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: glmpca
Dimension Reduction of Non-Normally Distributed Data
Papers that mentioned: 3
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASS
Papers that mentioned: 2,353
pypi: glmpca
Generalized PCA for dimension reduction of non-normally distributed data
Papers that mentioned: 3
pypi: parallel
Elementary parallel programming for Python
Papers that mentioned: 41
pypi: UTRme
UTRme
Papers that mentioned: 5
pypi: ViennaRNA
A library for the prediction and comparison of RNA secondary structures.
Papers that mentioned: 200