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Projects: pypi: graphlan

https://packages.ecosyste.ms/registries/pypi.org/packages/graphlan

GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. GraPhlAn focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.
2 versions
Latest release: about 6 years ago
44 downloads last month

Enhanced Analysis
Repository Activity:
Repository Owner: bioBakery (organization)
Software, documentation, and tutorials for microbial community profiling. Institutional
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +15 Institutional repository owner
    Repository owned by research institution
  • +10 Educational website
    Repository owner has educational domain website
  • +8 Science terms in README
    4 scientific terms found in README
Penalties:
  • -10 PyPI ecosystem
    General-purpose ecosystem
  • -15 No science keywords
    No scientific terms found in keywords/classifiers
Very Likely Science (100)

Papers Mentioning graphlan 5

10.1111/mec.15484
Environmental DNA surveys detect distinct metazoan communities across abyssal plains and seamounts in the western Clarion Clipperton Zone
Cited by: 43
Author(s): Olivier Laroche, Oliver Kersten, Craig R. Smith, Erica Goetze
Software Mentions: 8
Published: about 6 years ago
10.1128/mBio.00764-17
Drought Stress Results in a Compartment-Specific Restructuring of the Rice Root-Associated Microbiomes
Cited by: 278
Author(s): Christian Santos‐Medellín, Joseph Edwards, Zachary Liechty, Bao‐Anh Thi Nguyen, Venkatesan Sundaresan
Software Mentions: 7
Published: almost 9 years ago
10.3389/fmicb.2018.02364
Accounting for Bacterial Overlap Between Raw Water Communities and Contaminating Sources Improves the Accuracy of Signature-Based Microbial Source Tracking
Cited by: 16
Author(s): Moa Hägglund, Stina Bäckman, Anna Macellaro, Petter Lindgren, Emmy Borgmästars, Karin Jacobsson, Rikard Dryselius, Per Stenberg, Andreas Sjödin, Mats Forsman, Jon Ahlinder
Software Mentions: 6
Published: almost 8 years ago
10.1371/journal.pone.0172811
Longitudinal sampling of the lung microbiota in individuals with cystic fibrosis
Cited by: 61
Author(s): Fiona Whelan, Alya Heirali, Laura Rossi, Harvey Rabin, Michael D. Parkins, Michael G. Surette
Software Mentions: 5
Published: over 9 years ago
10.3389/fmicb.2021.682886
Beyond Taxonomic Identification: Integration of Ecological Responses to a Soil Bacterial 16S rRNA Gene Database
Cited by: 5
Author(s): Briony Jones, Tim Goodall, Paul B. L. George, Hyun S. Gweon, Jérémy Puissant, Daniel S. Read, Bridget Emmett, David A. Robinson, Davey L. Jones, Robert I. Griffiths
Software Mentions: 4
Published: about 5 years ago