Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0172811

https://doi.org/10.1371/journal.pone.0172811

Longitudinal sampling of the lung microbiota in individuals with cystic fibrosis

Cited by: 61
Author(s): Fiona Whelan, Alya Heirali, Laura Rossi, Harvey Rabin, Michael D. Parkins, Michael G. Surette
Published: over 7 years ago

Software Mentions 5

bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: graphlan
GraPhlAn is a software tool for producing high-quality circular representations of taxonomic and phylogenetic trees. GraPhlAn focuses on concise, integrative, informative, and publication-ready representations of phylogenetically- and taxonomically-driven investigation.
Papers that mentioned: 5